| 2019 | 19th International Workshop on Algorithms in Bioinformatics, WABI 2019, Niagara Falls, NY, USA, September 8-10, 2019 Katharina T. Huber, Dan Gusfield |
| 2019 | A Combinatorial Approach for Single-cell Variant Detection via Phylogenetic Inference. Mohammad Amin Edrisi, Hamim Zafar, Luay Nakhleh |
| 2019 | A New Paradigm for Identifying Reconciliation-Scenario Altering Mutations Conferring Environmental Adaptation. Roni Zoller, Meirav Zehavi, Michal Ziv-Ukelson |
| 2019 | Alignment- and Reference-Free Phylogenomics with Colored de Bruijn Graphs. Roland Wittler |
| 2019 | Better Practical Algorithms for rSPR Distance and Hybridization Number. Kohei Yamada, Zhi-Zhong Chen, Lusheng Wang |
| 2019 | Bounded-Length Smith-Waterman Alignment. Alexander Tiskin |
| 2019 | Building a Small and Informative Phylogenetic Supertree. Jesper Jansson, Konstantinos Mampentzidis, Sandhya T. P. |
| 2019 | Consensus Clusters in Robinson-Foulds Reticulation Networks. Alexey Markin, Oliver Eulenstein |
| 2019 | Context-Aware Seeds for Read Mapping. Hongyi Xin, Mingfu Shao, Carl Kingsford |
| 2019 | Detecting Transcriptomic Structural Variants in Heterogeneous Contexts via the Multiple Compatible Arrangements Problem. Yutong Qiu, Cong Ma, Han Xie, Carl Kingsford |
| 2019 | Empirical Performance of Tree-Based Inference of Phylogenetic Networks. Zhen Cao, Jiafan Zhu, Luay Nakhleh |
| 2019 | Fast and Accurate Structure Probability Estimation for Simultaneous Alignment and Folding of RNAs. Milad Miladi, Martin Raden, Sebastian Will, Rolf Backofen |
| 2019 | Faster Pan-Genome Construction for Efficient Differentiation of Naturally Occurring and Engineered Plasmids with Plaster. Qi Wang, Ryan A. Leo Elworth, Tian Rui Liu, Todd J. Treangen |
| 2019 | Finding All Maximal Perfect Haplotype Blocks in Linear Time. Jarno Alanko, Hideo Bannai, Bastien Cazaux, Pierre Peterlongo, Jens Stoye |
| 2019 | Front Matter, Table of Contents, Preface, Conference Organization. |
| 2019 | Inferring Diploid 3D Chromatin Structures from Hi-C Data. Alexandra Gesine Cauer, Gürkan Yardimci, Jean-Philippe Vert, Nelle Varoquaux, William Stafford Noble |
| 2019 | Jointly Embedding Multiple Single-Cell Omics Measurements. Jie Liu, Yuanhao Huang, Ritambhara Singh, Jean-Philippe Vert, William Stafford Noble |
| 2019 | Quantified Uncertainty of Flexible Protein-Protein Docking Algorithms. Nathan L. Clement |
| 2019 | Rapidly Computing the Phylogenetic Transfer Index. Jakub Truszkowski, Olivier Gascuel, Krister M. Swenson |
| 2019 | Read Mapping on Genome Variation Graphs. Naga Sai Kavya Vaddadi, Rajgopal Srinivasan, Naveen Sivadasan |
| 2019 | Synteny Paths for Assembly Graphs Comparison. Evgeny Polevikov, Mikhail Kolmogorov |
| 2019 | TRACTION: Fast Non-Parametric Improvement of Estimated Gene Trees. Sarah A. Christensen, Erin K. Molloy, Pranjal Vachaspati, Tandy J. Warnow |
| 2019 | Topological Data Analysis Reveals Principles of Chromosome Structure in Cellular Differentiation. Natalie Sauerwald, Yihang Shen, Carl Kingsford |
| 2019 | Validating Paired-End Read Alignments in Sequence Graphs. Chirag Jain, Haowen Zhang, Alexander T. Dilthey, Srinivas Aluru |
| 2019 | Weighted Minimum-Length Rearrangement Scenarios. Pijus Simonaitis, Annie Chateau, Krister M. Swenson |
| 2019 | pClay: A Precise Parallel Algorithm for Comparing Molecular Surfaces. Georgi D. Georgiev, Kevin F. Dodd, Brian Y. Chen |