| 2018 | 18th International Workshop on Algorithms in Bioinformatics, WABI 2018, Helsinki, Finland, August 20-22, 2018 Laxmi Parida, Esko Ukkonen |
| 2018 | A Duality-Based Method for Identifying Elemental Balance Violations in Metabolic Network Models. Hooman Zabeti, Tamon Stephen, Bonnie Berger, Leonid Chindelevitch |
| 2018 | A Dynamic Algorithm for Network Propagation. Barak Sternberg, Roded Sharan |
| 2018 | A Multi-labeled Tree Edit Distance for Comparing "Clonal Trees" of Tumor Progression. Nikolai Karpov, Salem Malikic, Md. Khaledur Rahman, Süleyman Cenk Sahinalp |
| 2018 | A Succinct Solution to Rmap Alignment. Martin D. Muggli, Simon J. Puglisi, Christina Boucher |
| 2018 | An Average-Case Sublinear Exact Li and Stephens Forward Algorithm. Yohei M. Rosen, Benedict J. Paten |
| 2018 | DGEN: A Test Statistic for Detection of General Introgression Scenarios. Ryan A. Leo Elworth, Chabrielle Allen, Travis Benedict, Peter Dulworth, Luay Nakhleh |
| 2018 | Degenerate String Comparison and Applications. Mai Alzamel, Lorraine A. K. Ayad, Giulia Bernardini, Roberto Grossi, Costas S. Iliopoulos, Nadia Pisanti, Solon P. Pissis, Giovanna Rosone |
| 2018 | Detecting Mutations by eBWT. Nicola Prezza, Nadia Pisanti, Marinella Sciortino, Giovanna Rosone |
| 2018 | Differentially Mutated Subnetworks Discovery. Morteza Chalabi Hajkarim, Eli Upfal, Fabio Vandin |
| 2018 | Essential Simplices in Persistent Homology and Subtle Admixture Detection. Saugata Basu, Filippo Utro, Laxmi Parida |
| 2018 | External memory BWT and LCP computation for sequence collections with applications. Lavinia Egidi, Felipe A. Louza, Giovanni Manzini, Guilherme P. Telles |
| 2018 | Front Matter, Table of Contents, Preface, Conference Organization. |
| 2018 | Haplotype-aware graph indexes. Jouni Sirén, Erik Garrison, Adam M. Novak, Benedict Paten, Richard Durbin |
| 2018 | Heuristic Algorithms for the Maximum Colorful Subtree Problem. Kai Dührkop, Marie Anne Lataretu, W. Timothy J. White, Sebastian Böcker |
| 2018 | Kermit: Guided Long Read Assembly using Coloured Overlap Graphs. Riku Walve, Pasi Rastas, Leena Salmela |
| 2018 | Minimum Segmentation for Pan-genomic Founder Reconstruction in Linear Time. Tuukka Norri, Bastien Cazaux, Dmitry Kosolobov, Veli Mäkinen |
| 2018 | Multiple-Choice Knapsack for Assigning Partial Atomic Charges in Drug-Like Molecules. Martin S. Engler, Bertrand Caron, Lourens E. Veen, Daan P. Geerke, Alan E. Mark, Gunnar W. Klau |
| 2018 | New Absolute Fast Converging Phylogeny Estimation Methods with Improved Scalability and Accuracy. Qiuyi (Richard) Zhang, Satish Rao, Tandy J. Warnow |
| 2018 | PRINCE: Accurate Approximation of the Copy Number of Tandem Repeats. Mehrdad Mansouri, Julian Booth, Margaryta Vityaz, Cédric Chauve, Leonid Chindelevitch |
| 2018 | Parsimonious Migration History Problem: Complexity and Algorithms. Mohammed El-Kebir |
| 2018 | Prefix-Free Parsing for Building Big BWTs. Christina Boucher, Travis Gagie, Alan Kuhnle, Giovanni Manzini |
| 2018 | Protein Classification with Improved Topological Data Analysis. Tamal K. Dey, Sayan Mandal |
| 2018 | Reconciling Multiple Genes Trees via Segmental Duplications and Losses. Riccardo Dondi, Manuel Lafond, Céline Scornavacca |
| 2018 | Spalter: A Meta Machine Learning Approach to Distinguish True DNA Variants from Sequencing Artefacts. Till Hartmann, Sven Rahmann |
| 2018 | The Wasserstein Distance as a Dissimilarity Measure for Mass Spectra with Application to Spectral Deconvolution. Szymon Majewski, Michal Aleksander Ciach, Michal Startek, Wanda Niemyska, Blazej Miasojedow, Anna Gambin |
| 2018 | l1-Penalised Ordinal Polytomous Regression Estimators with Application to Gene Expression Studies. Stéphane Chrétien, Christophe Guyeux, Serge Moulin |