| 2017 | 17th International Workshop on Algorithms in Bioinformatics, WABI 2017, Boston, MA, USA, August 21-23, 2017 Russell Schwartz, Knut Reinert |
| 2017 | A General Framework for Gene Tree Correction Based on Duplication-Loss Reconciliation. Nadia El-Mabrouk, Aïda Ouangraoua |
| 2017 | All Fingers Are Not the Same: Handling Variable-Length Sequences in a Discriminative Setting Using Conformal Multi-Instance Kernels. Sarvesh Nikumbh, Peter Ebert, Nico Pfeifer |
| 2017 | An IP Algorithm for RNA Folding Trajectories. Amir H. Bayegan, Peter Clote |
| 2017 | Analysis of Min-Hashing for Variant Tolerant DNA Read Mapping. Jens Quedenfeld, Sven Rahmann |
| 2017 | Assessing the Significance of Peptide Spectrum Match Scores. Anastasiia Abramova, Anton I. Korobeynikov |
| 2017 | Better Greedy Sequence Clustering with Fast Banded Alignment. Brian Brubach, Jay Ghurye, Mihai Pop, Aravind Srinivasan |
| 2017 | Byte-Aligned Pattern Matching in Encoded Genomic Sequences. Petr Procházka, Jan Holub |
| 2017 | Detecting Locus Acquisition Events in Gene Trees. Michal Aleksander Ciach, Anna Muszewska, Pawel Górecki |
| 2017 | Disentangled Long-Read De Bruijn Graphs via Optical Maps. Bahar Alipanahi, Leena Salmela, Simon J. Puglisi, Martin D. Muggli, Christina Boucher |
| 2017 | Efficient and Accurate Detection of Topologically Associating Domains from Contact Maps. Abbas Roayaei Ardakany, Stefano Lonardi |
| 2017 | Fast Spaced Seed Hashing. Samuele Girotto, Matteo Comin, Cinzia Pizzi |
| 2017 | Finding Local Genome Rearrangements. Pijus Simonaitis, Krister M. Swenson |
| 2017 | Forbidden Time Travel: Characterization of Time-Consistent Tree Reconciliation Maps. Nikolai Nøjgaard, Manuela Geiß, Daniel Merkle, Peter F. Stadler, Nicolas Wieseke, Marc Hellmuth |
| 2017 | Front Matter, Table of Contents, Preface, List of Authors. |
| 2017 | Gene Tree Parsimony for Incomplete Gene Trees. Md. Shamsuzzoha Bayzid, Tandy J. Warnow |
| 2017 | Improved De Novo Peptide Sequencing using LC Retention Time Information. Yves Frank, Tomas Hruz, Thomas Tschager, Valentin Venzin |
| 2017 | Optimal Completion of Incomplete Gene Trees in Polynomial Time Using OCTAL. Sarah A. Christensen, Erin K. Molloy, Pranjal Vachaspati, Tandy J. Warnow |
| 2017 | Optimal Computation of Overabundant Words. Yannis Almirantis, Panagiotis Charalampopoulos, Jia Gao, Costas S. Iliopoulos, Manal Mohamed, Solon P. Pissis, Dimitris Polychronopoulos |
| 2017 | Outlier Detection in BLAST Hits. Nidhi Shah, Stephen F. Altschul, Mihai Pop |
| 2017 | Rainbowfish: A Succinct Colored de Bruijn Graph Representation. Fatemeh Almodaresi, Prashant Pandey, Rob Patro |
| 2017 | Seed-driven Learning of Position Probability Matrices from Large Sequence Sets. Jarkko Toivonen, Jussi Taipale, Esko Ukkonen |
| 2017 | Shrinkage Clustering: A Fast and Size-Constrained Algorithm for Biomedical Applications. Chenyue W. Hu, Hanyang Li, Amina A. Qutub |
| 2017 | Sparsification Enables Predicting Kissing Hairpin Pseudoknot Structures of Long RNAs in Practice. Hosna Jabbari, Ian Wark, Carlo Montemagno, Sebastian Will |
| 2017 | ThIEF: Finding Genome-wide Trajectories of Epigenetics Marks. Anton Polishko, Md. Abid Hasan, Weihua Pan, Evelien M. Bunnik, Karine G. Le Roch, Stefano Lonardi |
| 2017 | Towards Distance-Based Phylogenetic Inference in Average-Case Linear-Time. Maxime Crochemore, Alexandre P. Francisco, Solon P. Pissis, Cátia Vaz |
| 2017 | Vaquita: Fast and Accurate Identification of Structural Variation Using Combined Evidence. Jongkyu Kim, Knut Reinert |
| 2017 | Yanagi: Transcript Segment Library Construction for RNA-Seq Quantification. Mohamed K. Gunady, Steffen Cornwell, Stephen M. Mount, Héctor Corrada Bravo |
| 2017 | abSNP: RNA-Seq SNP Calling in Repetitive Regions via Abundance Estimation. Shunfu Mao, Soheil Mohajer, Kannan Ramchandran, David Tse, Sreeram Kannan |