| 2013 | 20th European MPI Users's Group Meeting, EuroMPI '13, Madrid, Spain - September 15 - 18, 2013 Jack J. Dongarra, Javier García Blas, Jesús Carretero |
| 2013 | A GPU approach for accelerating 3D deformable registration (DARTEL) on brain biomedical images. Pedro Valero-Lara |
| 2013 | A communication library between multiple sets of MPI processes for a MPMD model. Takenori Shimosaka, Hitoshi Murai, Mitsuhisa Sato |
| 2013 | A data decomposition middleware tool with a generic built-in work-flow. Ahmad Salah, Kenli Li |
| 2013 | A dynamic pipeline for RNA sequencing on multicore processors. Héctor Martínez, Joaquín Tárraga, Ignacio Medina, Sergio Barrachina, Maribel Castillo, Joaquín Dopazo, Enrique S. Quintana-Ortí |
| 2013 | A fluid-structure-interaction tool by coupling of existing codes. Pablo Mosquera Michaelsen, Balázs Pritz, Martin Gabi |
| 2013 | A hierarchical parallel storage system based on distributed memory for large scale systems. Francisco Rodrigo Duro, Javier García Blas, Jesús Carretero |
| 2013 | Advancing application process affinity experimentation: open MPI's LAMA-based affinity interface. Joshua Hursey, Jeffrey M. Squyres |
| 2013 | Algorithms for large-scale whole genome association analysis. Elmar Peise, Diego Fabregat-Traver, Yurii S. Aulchenko, Paolo Bientinesi |
| 2013 | Analysis of topology-dependent MPI performance on Gemini networks. Antonio J. Peña, Ralf G. Correa Carvalho, James Dinan, Pavan Balaji, Rajeev Thakur, William Gropp |
| 2013 | Combining static and dynamic validation of MPI collective communications. Emmanuelle Saillard, Patrick Carribault, Denis Barthou |
| 2013 | DRASync: distributed region-based memory allocation and synchronization. Christi Symeonidou, Polyvios Pratikakis, Angelos Bilas, Dimitrios S. Nikolopoulos |
| 2013 | Dataflow coordination of data-parallel tasks via MPI 3.0. Justin M. Wozniak, Tom Peterka, Timothy G. Armstrong, James Dinan, Ewing L. Lusk, Michael Wilde, Ian T. Foster |
| 2013 | Design, implementation, and performance evaluation of MPI 3.0 on portals 4.0. Amin Hassani, Anthony Skjellum, Ron Brightwell, Brian W. Barrett |
| 2013 | Dynamic memory usage analysis of MPI libraries using DMATP-MPI. Shinji Sumimoto, Takayuki Okamoto, Hideyuki Akimoto, Tomoya Adachi, Yuichiro Ajima, Kenichi Miura |
| 2013 | Efficient and truly passive MPI-3 RMA using InfiniBand atomics. Mingzhe Li, Sreeram Potluri, Khaled Hamidouche, Jithin Jose, Dhabaleswar K. Panda |
| 2013 | Efficient parallel construction of suffix trees for genomes larger than main memory. Matteo Comin, Montse Farreras |
| 2013 | Enabling MPI interoperability through flexible communication endpoints. James Dinan, Pavan Balaji, David Goodell, Douglas Miller, Marc Snir, Rajeev Thakur |
| 2013 | Energy estimation for MPI broadcasting algorithms in large scale HPC systems. Mohammed el Mehdi Diouri, Olivier Glück, Jean-Christophe Mignot, Laurent Lefèvre |
| 2013 | Entire motifs search of secondary structures in proteins: a parallelization study. Marco Ferretti, Mirto Musci |
| 2013 | First observations using nonblocking collectives in MVAPICH. Hubert Ritzdorf |
| 2013 | Improving MPI applications with a new MPI_Info and the use of the memoization. Alejandro Calderón, Jesús Carretero, Félix García Carballeira, Javier Fernández, Daniel Higuero, Borja Bergua |
| 2013 | Improving collective I/O performance by pipelining request aggregation and file access. Saba Sehrish, Seung Woo Son, Wei-keng Liao, Alok N. Choudhary, Karen Schuchardt |
| 2013 | In-place algorithms for the symmetric all-to-all exchange with MPI. Michael Hofmann, Gudula Rünger |
| 2013 | Job scheduling for optimizing data locality in Hadoop clusters. Aprígio Bezerra, Porfidio Hernández, Antonio Espinosa, Juan Carlos Moure |
| 2013 | MPI datatype processing using runtime compilation. Timo Schneider, Fredrik Kjolstad, Torsten Hoefler |
| 2013 | McMPI: a managed-code MPI library in pure C#. Daniel J. Holmes, Stephen Booth |
| 2013 | Methodology for MPI applications autotuning. Antonio Pimenta, Eduardo César, Anna Sikora |
| 2013 | Multi-parallel prefiltering on the convey HC-1 for supporting homology detection. Fabian Nowak, Michael Bromberger, Martin Schindewolf, Wolfgang Karl |
| 2013 | Non-negative matrix factorization on low-power architectures: a comparative study. Carlos García, Francisco D. Igual, Guillermo Botella, Manuel Prieto, Francisco Tirado |
| 2013 | On the performance of concurrent transfers in collective algorithms. Juan-Antonio Rico-Gallego, Juan Carlos Díaz Martín |
| 2013 | Optimization of MPI persistent communication. Masayuki Hatanaka, Atsushi Hori, Yutaka Ishikawa |
| 2013 | Optimization of MPI_Allreduce on the blue Gene/Q supercomputer. Sameer Kumar, Daniel Faraj |
| 2013 | Optimized process placement for collective I/O operations. Vishwanath Venkatesan, Rakhi Anand, Jaspal Subhlok, Edgar Gabriel |
| 2013 | P-Biblio-MetReS, a parallel data mining tool for the reconstruction of molecular networks. Ivan Teixido, Anabel Usie, Josep L. Lérida, Francesc Solsona, Jorge Comas, Nestor Torres, Hiren Karathia, Rui Alves |
| 2013 | Parallel algorithm for simulating the spatial transmission of influenza in EpiGraph. Gonzalo Martín, David E. Singh, Maria-Cristina V. Marinescu, Jesús Carretero |
| 2013 | Parallel bucket-brigade communication interface for scientific applications. Daiki Fukudome, Toshiya Takami |
| 2013 | Parallel efficient aligner of pyrosequencing reads. Miguel E. Coimbra, Francisco Fernandes, Luís M. S. Russo, Ana T. Freitas |
| 2013 | Parallel implementation of a X-ray tomography reconstruction algorithm based on MPI and CUDA. Francisco Javier García Blas, Florin Isaila, Mónica Abella, Jesús Carretero, Ernesto Liria, Manuel Desco |
| 2013 | Parallel strategies for an inverse docking method. Romain Vasseur, Stéphanie Baud, Luiz Angelo Steffenel, Xavier Vigouroux, Laurent Martiny, Michaël Krajecki, Manuel Dauchez |
| 2013 | Parallelizing a hybrid multiobjective differential evolution for identifying cis-regulatory elements. David L. González-Álvarez, Miguel A. Vega-Rodríguez |
| 2013 | Parallelizing a multiobjective swarm intelligence approach to phylogenetics using hybrid MPI/OpenMP schemes. Sergio Santander-Jiménez, Miguel A. Vega-Rodríguez |
| 2013 | Revisiting rendezvous protocols in the context of RDMA-capable host channel adapters and many-core processors. Masamichi Takagi, Yuichi Nakamura, Atsushi Hori, Balazs Gerofi, Yutaka Ishikawa |
| 2013 | Run-time creation of the turbulent channel flow database by an HPC simulation using MPI-DB. Jason Graham, Edward Givelberg, Kalin Kanov |
| 2013 | Runtime MPI collective checking with tree-based overlay networks. Tobias Hilbrich, Bronis R. de Supinski, Fabian Hänsel, Matthias S. Müller, Martin Schulz, Wolfgang E. Nagel |
| 2013 | Runtime message uniquification for accurate communication analysis on incomplete MPI event traces. Michael Wagner, Jens Doleschal, Wolfgang E. Nagel, Andreas Knüpfer |
| 2013 | Scalability and accuracy improvements of consistency-based multiple sequence alignment tools. Miquel Orobitg, Jordi Lladós, Fernando Guirado, Fernando Cores, Cédric Notredame |
| 2013 | Seamless coarse grained parallelism integration in intensive bioinformatics workflows. François Moreews, Dominique Lavenier |
| 2013 | The impact of hybrid-core processors on MPI message rate. Brian W. Barrett, Simon D. Hammond, Ron Brightwell, K. Scott Hemmert |
| 2013 | Towards the availability of Java bindings in open MPI. Oscar Vega-Gisbert, José E. Román, Siegmar Groß, Jeffrey M. Squyres |
| 2013 | Triangulating molecular surfaces on multiple GPUs. Sérgio Dias, Abel João Padrão Gomes |
| 2013 | Understanding the formation of wait states in applications with one-sided communication. Marc-André Hermanns, Manfred Miklosch, David Böhme, Felix Wolf |
| 2013 | Using MPI in high-performance computing services. Judicael A. Zounmevo, Dries Kimpe, Robert B. Ross, Ahmad Afsahi |