| 1995 | 3-D Lookup: Fast Protein Structure Database Searches at 90% Reliability. Liisa Holm, Chris Sander |
| 1995 | A Constraint-Based Assignment System for Automating Long Side Chain Assignments in Protein 2D NMR Spectra. Scott Leishman, Peter M. D. Gray, John E. Fothergill |
| 1995 | A Distance-Based Block Searching Algorithm. Marie-France Sagot, Alain Viari, Henry Soldano |
| 1995 | A Divide and Conquer Approach to Multiple Alignment. Andreas W. M. Dress, Georg Füllen, Sören Perrey |
| 1995 | A New Approach to Primer Selection in Polymerase Chain Reaction Experiments. William R. Pearson, Gabriel Robins, Dallas E. Wrege, Tongtong Zhang |
| 1995 | A Specification for Defining and Annotating Regions of Macromolecular Structures. Steven E. Brenner, Tim J. P. Hubbard |
| 1995 | APIC : A Generic Interface for Sequencing Projects. Gilles Bisson, Alain Garreau |
| 1995 | An Optimized Parsing Algorithm Well Suited to RNA Folding. Fabrice Lefebvre |
| 1995 | Automata-Theoretic Models of Mutation and Alignment. David B. Searls, Kevin P. Murphy |
| 1995 | Automatic RNA Secondary Structure Determination with Stochastic Context-Free Grammars. Leslie Grate |
| 1995 | BONSAI Garden: Parallel Knowledge Discovery System for Amino Acid Sequences. Takayoshi Shoudai, Michael Lappe, Satoru Miyano, Ayumi Shinohara, Takeo Okazaki, Setsuo Arikawa, Tomoyuki Uchida, Shinichi Shimozono, Takeshi Shinohara, Satoru Kuhara |
| 1995 | Characterizing Oriented Protein Structural Sites Using Biochemical Properties. Steven C. Bagley, Liping Wei, Carol Cheng, Russ B. Altman |
| 1995 | Classifying Nucleic Acid Sub-Sequences as Introns or Exons Using Genetic Programming. Simon Handley |
| 1995 | Computer Tool FUNSITE for Analysis of Eukaryotic Regulatory Genomic Sequences. Alexander E. Kel, Yury V. Kondrakhin, Ph. A. Kolpakov, O. V. Kel, Aida G. Romashchenko, Edgar Wingender, Luciano Milanesi, Nikolay A. Kolchanov |
| 1995 | Constituting a Receptor-Ligand Information Base from Quality-Enriched Data. Klemens Hemm, Karl Aberer, Manfred Hendlich |
| 1995 | Cooperative Computer System For Genome Sequence Analysis. Claudine Médigue, Thierry Vermat, Gilles Bisson, Alain Viari, Antoine Danchin |
| 1995 | DNA Sequence Assembly and Genetic Algorithms - New Results and Puzzling Insights. Rebecca Parsons, Mark E. Johnson |
| 1995 | Evaluating Regularizers for Estimating Distributions of Amino Acids. Kevin Karplus |
| 1995 | Graph-Theoretic Approach to RNA Modeling Using Comparative Data. Robert B. Cary, Gary D. Stormo |
| 1995 | Identification of CDNA Sequences by Specific Oligonucleotide Sets - A Computer Tool and Application. Nikolay A. Kolchanov, Oleg V. Vishnevsky, Vladimir N. Babenko, Alexander E. Kel, Ilya N. Shindyalov |
| 1995 | Identification of Human Gene Structure Using Linear Discriminant Functions and Dynamic Programming. Victor V. Solovyev, Asaf A. Salamov, Charles B. Lawrence |
| 1995 | Identification of Protein Motifs Using Conserved Amino Acid Properties and Partitioning Techniques. Thomas D. Wu, Douglas L. Brutlag |
| 1995 | Investigations of Escherichia coli Promoter Sequences with Artificial Neural Networks: New Signals Discovered Upstream of the Transcriptional Startpoint. Anders Gorm Pedersen, Jacob Engelbrecht |
| 1995 | MMDB: An ASN.1 Specification for Macromolecular Structure. Hitomi Ohkawa, James Ostell, Stephen H. Bryant |
| 1995 | Maximum Entropy Weighting of Aligned Sequences of Proteins or DNA. Anders Krogh, Graeme J. Mitchison |
| 1995 | Multiple Alignment Using Hidden Markov Models. Sean R. Eddy |
| 1995 | Neural Net Representations of Empirical Protein Potentials. Tal Grossman, Robert M. Farber, Alan S. Lapedes |
| 1995 | Neweyes: A System for Comparing Biological Sequences Using the Running Karp-Rabin Greedy String-Tiling Algorithm. Michael J. Wise |
| 1995 | Parallel Sequence Alignment in Limited Space. J. Alicia Grice, Richard Hughey, Don Speck |
| 1995 | Periodic Sequence Patterns in Human Exons. Pierre Baldi, Søren Brunak, Yves Chauvin, Jacob Engelbrecht, Anders Krogh |
| 1995 | Predicting Free Energy Contribution to the Conformational Stability of Folded Proteins From the Residue Sequence with Radial Basis Function Networks. Rita Casadio, Mario Compiani, Piero Fariselli, Francesco Vivarelli |
| 1995 | Predicting Protein Folding Classes without Overly Relying on Homology. Mark Craven, Richard J. Mural, Loren J. Hauser, Edward C. Uberbacher |
| 1995 | Proceedings of the Third International Conference on Intelligent Systems for Molecular Biology, Cambridge, United Kingdom, July 16-19, 1995 Christopher J. Rawlings, Dominic A. Clark, Russ B. Altman, Lawrence Hunter, Thomas Lengauer, Shoshana J. Wodak |
| 1995 | Protein Docking: Combining Symbolic Descriptions of Molecular Surfaces and Grid-Based Scoring Functions. Friedrich Ackermann, Grit Herrmann, Franz Kummert, Stefan Posch, Gerhard Sagerer, Dietmar Schomburg |
| 1995 | Protein Modeling with Hybrid Hidden Markov Model/Neural Network Architectures. Pierre Baldi, Yves Chauvin |
| 1995 | Recognising Promoter Sequences Using An Artificial Immune System. Denise E. Cooke, John E. Hunt |
| 1995 | Reconstruction of Metabolic Networks Using Incomplete Information. Terry Gaasterland, Evgeni Selkov |
| 1995 | Recursive Dynamic Programming for Adaptive Sequence and Structure Alignment. Ralf Thiele, Ralf Zimmer, Thomas Lengauer |
| 1995 | Relation Between Protein Structure, Sequence Homology and Composition of Amino Acids. Eddy Mayoraz, Inna Dubchak, Ilya B. Muchnik |
| 1995 | Softening Constraints in Constraint-Based Protein Topology Prediction. Simon Parsons |
| 1995 | Solvent Accessible Surface Representation in a Database System for Protein Docking. Thomas Seidl, Hans-Peter Kriegel |
| 1995 | Subclass Approach for Mutational Spectrum Analysis. Igor B. Rogozin, Galina V. Glazko, Evgeniy I. Latkin |
| 1995 | Symbolic Generation and Clustering of RNA 3-D Motifs. Marielle Foucrault, François Major |
| 1995 | TOPITS: Threading One-Dimensional Predictions Into Three-Dimensional Structures. Burkhard Rost |
| 1995 | The Value of Prior Knowledge in Discovering Motifs with MEME. Timothy L. Bailey, Charles Elkan |
| 1995 | Time-Efficient Docking of Flexible Ligands into Active Sites of Proteins. Matthias Rarey, Bernd Kramer, Thomas Lengauer |
| 1995 | Towards an Intelligent System for the Automatic Assignment of Domains in Globular Proteins. Michael J. E. Sternberg, Hedvig Hegyi, Suhail A. Islam, Jingchu Luo, Robert B. Russell |
| 1995 | Using Temporal Reasoning for Genome Map Assembly. Olivier Schmeltzer |
| 1995 | Viewing Genome Data as Objects for Application Development. Ellen R. Bergeman, Mark Graves, Charles B. Lawrence |