e-Science B

81 papers

YearTitle / Authors
202218th IEEE International Conference on e-Science, e-Science 2022, Salt Lake City, UT, USA, October 11-14, 2022
2022A Framework for Evaluating MRC Approaches with Unanswerable Questions.
Hung Du, Srikanth Thudumu, Sankhya Singh, Scott Barnett, Irini Logothetis, Rajesh Vasa, Kon Mouzakis
2022A Framework for Extracting Scientific Measurements and Geo-Spatial Information from Scientific Literature.
Muhammad Asif Suryani, Yannick Wölker, Deepak Sharma, Christian Beth, Klaus Wallmann, Matthias Renz
2022A Methodology to Generate Efficient Neural Networks for Classification of Scientific Datasets.
Ria Patel, Ariel Keller Rorabaugh, Paula Olaya, Silvina Caíno-Lores, Georgia Channing, Catherine D. Schuman, Osamu Miyashita, Florence Tama, Michela Taufer
2022A Science-Enabled Virtual Reality Demonstration to Increase Social Acceptance of Prescribed Burns.
Isaac Nealey, Daniela Encinas Pacheco, Ivannia Gomez Moreno, Melissa Floca, Daniel Crawl, Ilkay Altintas
2022A Web-Based System for Contagion Simulations on Networked Populations.
Tanvir Ferdousi, Aparna Kishore, Lucas Machi, Dustin Machi, Chris J. Kuhlman, S. S. Ravi
2022AIQUAM: Artificial Intelligence-based water QUAlity Model.
Ciro Giuseppe De Vita, Gennaro Mellone, Diana Di Luccio, Sokol Kosta, Angelo Ciaramella, Raffaele Montella
2022An open science exploration of global 1-km simulations of the earth's atmosphere.
Valentine Anantharaj, Samuel Hatfield, Inna Polichtchouk, Nils Wedi, Morgan E. O'Neill, Thomas Papatheodore, Peter Dueben
2022Anguix: Cell Signaling Modeling Improvement through Sabio-RK association to Reactome.
Fabio Montoni, Ronaldo N. De Sousa, Marcelo B. De Lima Junior, Cristiano G. S. Campos, Willian Wang, Vivian M. Constantino, Cássia S. Sanctos, Hugo Aguirre Armelin, Marcelo da Silva Reis
2022Application of Edge-to-Cloud Methods Toward Deep Learning.
Khushi Choudhary, Nona Nersisyan, Edward Lin, Shobana Chandrasekaran, Rajiv Mayani, Loïc Pottier, Angela P. Murillo, Nicole K. Virdone, Kerk F. Kee, Ewa Deelman
2022Augmenting Singularity to Generate Fine-grained Workflows, Record Trails, and Data Provenance.
Dominic Kennedy, Paula Olaya, Jay F. Lofstead, Rodrigo Vargas, Michela Taufer
2022Automated metadata extraction: challenges and opportunities.
Tyler J. Skluzacek, Kyle Chard, Ian T. Foster
2022Automatic Versioning of Time Series Datasets: a FAIR Algorithmic Approach.
Alba González-Cebrián, Luke A. McGuinness, Michael Bradford, Adriana E. Chis, Horacio González-Vélez
2022Automatically finding Metamorphic Relations in Computational Material Science Parsers.
Sebastian Müller, Valentin Gogoll, Anh Duc Vu, Timo Kehrer, Lars Grunske
2022Automating Multivariable Workflow Composition for Model-to-Model Integration.
Raul Alejandro Vargas-Acosta, Luis Garnica Chavira, Natalia Villanueva-Rosales, Deana D. Pennington
2022Benefits and Limitations of Jupyter-based Scientific Web Applications.
Nicole Brewer, Robert Campbell, Rajesh Kalyanam, I Luk Kim, Carol X. Song, Lan Zhao
2022CloudNet: A Deep Learning Approach for Mitigating Occlusions in Landsat-8 Imagery using Data Coalescence.
Paahuni Khandelwal, Samuel Armstrong, Abdul Matin, Shrideep Pallickara, Sangmi Lee Pallickara
2022Cluster Analysis of Open Research Data and a Case for Replication Metadata.
Ana Trisovic
2022Context-Aware Notebook Search in a Jupyter-Based Virtual Research Environment.
Na Li, Siamak Farshidi, Riccardo Bianchi, Spiros Koulouzis, Zhiming Zhao
2022Data Fusion for Connectivity Analysis between Ocean Regions.
Carola Trahms, Yannick Wölker, Patricia Handmann, Martin Visbeck, Matthias Renz
2022Democratising large scale instrument-based science through e-Infrastructure.
David Abramson, Deborah S. Barkauskas, Jake Carroll, Nicholas D. Condon, Naphak Modhiran, Hoang Nguyen, James Springfield, Daniel Watterson, Chao Jin
2022Efficient Cloud-Based Calibration of Input Data for Forest Fire Spread Prediction.
Edigley Fraga, Ana Cortés, Tomàs Margalef, Porfidio Hernández
2022Efficient Radio Interferometric Imaging on the GPU.
Honghao Liu, Qiong Luo, Feng Wang
2022Enabling Autonomous Electron Microscopy for Networked Computation and Steering.
Anees Al-Najjar, Nageswara S. V. Rao, Ramanan Sankaran, Maxim A. Ziatdinov, Debangshu Mukherjee, Olga Ovchinnikova, Kevin Roccapriore, Andrew R. Lupini, Sergei V. Kalinin
2022Enabling Call Path Querying in Hatchet to Identify Performance Bottlenecks in Scientific Applications.
Ian Lumsden, Jakob Lüttgau, Vanessa Lama, Connor Scully-Allison, Stephanie Brink, Katherine E. Isaacs, Olga Pearce, Michela Taufer
2022Enabling LivePublication.
Augustus Ellerm, Benjamin Adams, Mark Gahegan, Lukas Trombach
2022Examining the Effect of Implementation Factors on Deep Learning Reproducibility.
Kevin L. Coakley, Christine R. Kirkpatrick, Odd Erik Gundersen
2022Exploring Tradeoffs in Federated Learning on Serverless Computing Architectures.
Matt Baughman, Ian T. Foster, Kyle Chard
2022Exploring the Enforcement of Private, Dynamic Policies on Medical Workflow Execution.
Christopher A. Esterhuyse, Tim Müller, L. Thomas van Binsbergen, Adam S. Z. Belloum
2022Extending OpenKIM with an Uncertainty Quantification Toolkit for Molecular Modeling.
Yonatan Kurniawan, Cody L. Petrie, Mark K. Transtrum, Ellad B. Tadmor, Ryan S. Elliott, Daniel S. Karls, Mingjian Wen
2022F*** workflows: when parts of FAIR are missing.
Sean R. Wilkinson, Greg Eisenhauer, Anuj J. Kapadia, Kathryn Knight, Jeremy Logan, Patrick M. Widener, Matthew Wolf
2022FLoX: Federated Learning with FaaS at the Edge.
Nikita Kotsehub, Matt Baughman, Ryan Chard, Nathaniel Hudson, Panos Patros, Omer F. Rana, Ian T. Foster, Kyle Chard
2022Facilitating Collaboration in Machine Learning and High-Performance Computing Projects with an Interaction Room.
Matthias Book, Morris Riedel, Helmut Neukirchen, Ernir Erlingsson
2022Failure Sources in Machine Learning for Medicine - A Study.
Hana Ahmed, Roselyne Tchoua, Jay F. Lofstead
2022Finding the Signal: Near Real-time Data Analysis for Urban Traffic Monitoring on a Distributed Bluetooth Sensor Network.
Mohsen Sichani, Richard Arnold, Kris Bubendorfer
2022Generating Synthetic Images & Data to Improve Object Detection in CCTV Footage from Public Transport.
Mike Simpson, Nik Khadijah Nik Aznan, John Brennan, Paul Watson, Philip James, Jennine Jonczyk
2022HPC Extensions to the OpenKIM Processing Pipeline.
Daniel S. Karls, Steven M. Clark, Brendon A. Waters, Ryan S. Elliott, Ellad B. Tadmor
2022Half-Precision Scalar Support in Kokkos and Kokkos Kernels: An Engineering Study and Experience Report.
Evan Harvey, Reed Milewicz, Christian Trott, Luc Berger-Vergiat, Siva Rajamanickam
2022Identifying Structural Properties of Proteins from X-ray Free Electron Laser Diffraction Patterns.
Paula Olaya, Silvina Caíno-Lores, Vanessa Lama, Ria Patel, Ariel Keller Rorabaugh, Osamu Miyashita, Florence Tama, Michela Taufer
2022Infection Transmission Ontology: Standardization of Infection Transmission Data.
Elena Slavco, Martine de Vos, Miel Hostens, Jan L. Top, Egil A. J. Fischer
2022Managing Database-Application Co-Evolution in a Scientific Data Ecosystem.
Robert E. Schuler, Carl Kesselman
2022Molecular Dynamics Workflow Decomposition for Hybrid Classic/Quantum Systems.
Sandeep Suresh Cranganore, Vincenzo De Maio, Ivona Brandic, Tu Mai Anh Do, Ewa Deelman
2022Multi-Tissue Analysis Using Synchrotron Radiation Micro-CT Images.
Michael Sieverts, Nikita Rabbitt, Dilworth Y. Parkinson, Douglas W. Sborov, Claire Acevedo
2022Neural Network Bias in Analysis of Galaxy Photometry Data.
Hunter Goddard, Lior Shamir
2022NeuroCI: Continuous Integration of Neuroimaging Results Across Software Pipelines and Datasets.
Jacob Sanz-Robinson, Arman Jahanpour, Natalie Phillips, Tristan Glatard, Jean-Baptiste Poline
2022ParticleGrid: Enabling Deep Learning using 3D Representation of Materials.
Shehtab Zaman, Ethan Ferguson, Cécile Pereira, Denis Akhiyarov, Mauricio Araya-Polo, Kenneth Chiu
2022PiMS: A Pre-ML Labelling Tool.
Irini Logothetis, Scott Barnett, Leonard Hoon, Srikanth Thudumu, Joseph Mathew, Carl Luckhoff, Gerard O'Reilly, David Collard, Rajesh Vasa, Kon Mouzakis, Mark Fitzgerald
2022RSE-eScience 2022 Keynote: How to Grow Diverse and Sustainable Teams through Mentorship.
Caleb Jackson
2022ReWorDs 2022 Keynote: Towards Orchestrating Distributed & Data-Intensive Workflows.
Nathan R. Tallent
2022Real-World Experiences Adopting Workflows at Exascale on the ExaAM Project.
Addi Malviya-Thakur, Reed Milewicz, Samuel Grayson, Philip W. Fackler, James F. Belak, John A. Turner
2022Remote Instrumentation Science Environment for Intelligent Image Analytics.
Mauro Lemus Alarcon, Songjie Wang, Nguyen P. Nguyen, Ashish Pandey, Filiz Bunyak, Matthew R. Maschmann, Kannappan Palaniappan, Prasad Calyam
2022Representing Steerable Bases for cryo-EM in ASPIRE.
Christopher Langfield, Joshua Carmichael, Garrett Wright, Joakim Andén, Amit Singer
2022Reproducibility in Brain-Computer Interface Research: A Replication-Based Analysis.
Parthiv Menon, Vignesh Sekaran, Garima Bajwa
2022Reproducible Cross-border High Performance Computing for Scientific Portals.
Kessy Abarenkov, Anne Fouilloux, Helmut Neukirchen, Abdulrahman Azab
2022Reproducible Notebook Containers using Application Virtualization.
Raza Ahmad, Naga Nithin Manne, Tanu Malik
2022Reproducing and Extending Analytical Performance Models of Generalized Hierarchical Scheduling.
Jakob Lüttgau, Silvina Caíno-Lores, Kae Suarez, Dong H. Ahn, Stephen Herbein, Michela Taufer
2022Robust Meta-Workflow Management with Mufasa.
Ben Lyons, Douglas Thain
2022Robustness of Sample and Multiscale Entropy Estimators in Noisy and Incomplete Time Series.
Scott Perkey, Alberto Krone-Martins
2022Running Ensemble Workflows at Extreme Scale: Lessons Learned and Path Forward.
Kshitij Mehta, Ashley Cliff, Frédéric Suter, Angelica M. Walker, Matthew Wolf, Daniel A. Jacobson, Scott Klasky
2022SIM-SITU: A Framework for the Faithful Simulation of in situ Processing.
Valentin Honoré, Tu Mai Anh Do, Loïc Pottier, Rafael Ferreira da Silva, Ewa Deelman, Frédéric Suter
2022Scalable Composition and Analysis Techniques for Massive Scientific Workflows.
Dong H. Ahn, Xiaohua Zhang, Jeffrey Mast, Stephen Herbein, Francesco Di Natale, Dan Kirshner, Sam Ade Jacobs, Ian Karlin, Daniel J. Milroy, Bronis R. de Supinski, Brian Van Essen, Jonathan E. Allen, Felice C. Lightstone
2022Subspace based Anomaly Detection Framework for Point Clouds.
Johnahan Van Zyl, Hung Du, Srikanth Thudumu, Irini Logothetis, Scott Barnett, Rajesh Vasa, Kon Mouzakis
2022Text Summarization towards Scientific Information Extraction.
Abigail Keller, Jacob Furst, Daniela Raicu, Peter M. Hastings, Roselyne Tchoua
2022The BioExcel methodology for developing dynamic, scalable, reliable and portable computational biomolecular workflows.
Jorge Ejarque, Pau Andrio, Adam Hospital, Javier Conejero, Daniele Lezzi, Josep Lluís Gelpí, Rosa M. Badia
2022The Ghost of Performance Reproducibility Past.
Srinivasan Ramesh, Mikhail Titov, Matteo Turilli, Shantenu Jha, Allen D. Malony
2022The Materials Commons Data Repository.
Glenn Tarcea, Brian Puchala, Tracy Berman, Giorgio Scorzelli, Valerio Pascucci, Michela Taufer, John Allison
2022The e-Science Central Study Data Platform.
Paul Watson, Hugo Hiden
2022Toward Reusable Science with Readable Code and Reproducibility.
Layan Bahaidarah, Ethan Hung, Andreas Francisco De Melo Oliveira, Jyotsna Penumaka, Lukas Rosario, Ana Trisovic
2022Toward Scientific Workflows in a Serverless World.
Aakash Khochare, Yogesh Simmhan, Sameep Mehta, Arvind Agarwal
2022Toward a Framework for Integrative, FAIR, and Reproducible Management of Data on the Dynamic Balance of Microbial Communities.
Luiz M. R. Gadelha Jr., Martin Hohmuth, Mahnoor Zulfiqar, David Schöne, Sheeba Samuel, Maria Sorokina, Christoph Steinbeck, Birgitta König-Ries
2022Towards Optimal Line of Sight Coverage.
Peter Gu, Tamás Budavári, Amanda Galante, Randal C. Burns
2022Towards a Dynamic Composability Approach for using Heterogeneous Systems in Remote Sensing.
Ilkay Altintas, Ismael Pérez, Dmitry Mishin, Adrien Trouillaud, Christopher Irving, John J. Graham, Mahidhar Tatineni, Thomas A. DeFanti, Shawn Strande, Larry Smarr, Michael L. Norman
2022Tracking Dubious Data: Protecting Scientific Workflows from Invalidated Experiments.
Jim Pruyne, Justin M. Wozniak, Ian T. Foster
2022UAV Swarms in Smart Agriculture: Experiences and Opportunities.
Chengyi Qu, Jayson Boubin, Durbek Gafurov, Jianfeng Zhou, Noel Aloysius, Henry Nguyen, Prasad Calyam
2022Ubique: A New Model for Untangling Inter-task Data Dependence in Complex HPC Workflows.
Jae-Seung Yeom, Dong H. Ahn, Ian Lumsden, Jakob Lüttgau, Silvina Caíno-Lores, Michela Taufer
2022Understanding the Impact of Synchronous, Asynchronous, and Hybrid In-Situ Techniques in Computational Fluid Dynamics Applications.
Yi Ju, Adalberto Perez, Stefano Markidis, Philipp Schlatter, Erwin Laure
2022Upscaling of Cosmological N-body Simulations.
Miguel Conceição, Alberto Krone-Martins, Antonio da Silva
2022Using Geoweaver to Make Snow Mapping Workflow FAIR.
Ahmed Alnaim, Ziheng Sun
2022Using Microservices to Design Patient-facing Research Software.
Martin Chapman, Abigail G.-Medhin, Isabel Sassoon, Nadin Kökciyan, Elizabeth I. Sklar, Vasa Curcin
2022Utilisation Profiles of Bridging Function Chain for Healthcare Use Cases.
Jamila Alsayed Kassem, Adam Belloum, Tim Müller, Paola Grosso
2022frances: A Deep Learning NLP and Text Mining Web Tool to Unlock Historical Digital Collections: A Case Study on the Encyclopaedia Britannica.
Rosa Filgueira