| 2002 | DNA Computing, 7th International Workshop on DNA-Based Computers, DNA 2001, Tampa, Florida, USA, June 10-13, 2001, Revised Papers Natasa Jonoska, Nadrian C. Seeman |
| 2001 | A Clause String DNA Algorithm for SAT. Vincenzo Manca, Claudio Zandron |
| 2001 | A Note on Graph Splicing Languages. N. Gnanamalar David, K. G. Subramanian, D. Gnanaraj Thomas |
| 2001 | A Proposal of DNA Computing on Beads with Application to SAT Problems. Yoichi Takenaka, Akihiro Hashimoto |
| 2001 | A Realization of Information Gate by Using Enterococcus faecalis Pheromone System. Kenichi Wakabayashi, Masayuki Yamamura |
| 2001 | A Universal Time-Varying Distributed H System of Degree 1. Maurice Margenstern, Yurii Rogozhin |
| 2001 | An Object Oriented Simulation of Real Occurring Molecular Biological Processes for DNA Computing and Its Experimental Verification. Thomas Hinze, Uwe Hatnik, Monika Sturm |
| 2001 | Another Realization of Aqueous Computing with Peptide Nucleic Acid. Masayuki Yamamoto, Yusuke Hiroto, Taku Motoba |
| 2001 | Aqueous Solutions of Algorithmic Problems: Emphasizing Knights on a 3 x 3. Tom Head, Xia Chen, Matthew J. Nichols, Masayuki Yamamura, Susannah Gal |
| 2001 | Biomolecular Computation in Virtual Test Tubes. Max H. Garzon, Chris Oehmen |
| 2001 | Boundary Components of Thickened Graphs. Natasa Jonoska, Masahico Saito |
| 2001 | Cascadable Hybridisation Transfer of Specific DNA between Microreactor Selection Modules. Robert Penchovsky, John S. McCaskill |
| 2001 | Coding Properties of DNA Languages. Salah Hussini, Lila Kari, Stavros Konstantinidis |
| 2001 | Computing with Membranes: Variants with an Enhanced Membrane Handling. Maurice Margenstern, Carlos Martín-Vide, Gheorghe Paun |
| 2001 | DNA Computing in Microreactors. Danny van Noort, Frank-Ulrich Gast, John S. McCaskill |
| 2001 | DNA Scissors. James C. Mitchell, Bernard Yurke |
| 2001 | DNA Starts to Learn Poker. David Harlan Wood, Hong Bi, Steven Orla Kimbrough, Dong-Jun Wu, Junghuei Chen |
| 2001 | DNA-based Parallel Computation of Simple Arithmetic. Hubert Hug, Rainer Schuler |
| 2001 | DNASequencesGenerator: A Program for the Construction of DNA Sequences. Udo Feldkamp, Sam Saghafi, Wolfgang Banzhaf, Hilmar Rauhe |
| 2001 | Developing Support System for Sequence Design in DNA Computing. Fumiaki Tanaka, Masashi Nakatsugawa, Masahito Yamamoto, Toshikazu Shiba, Azuma Ohuchi |
| 2001 | Experimental Conformation of the Basic Principles of Length-only Discrimination. Yevgenia Khodor, Julia Khodor, Thomas F. Knight Jr. |
| 2001 | Experimental Construction of Very Large Scale DNA Databases with Associative Search Capability. John H. Reif, Thomas H. LaBean, Michael Pirrung, Vipul S. Rana, Bo Guo, Carl Kingsford, Gene S. Wickham |
| 2001 | Horn Clause Computation by Self-assembly of DNA Molecules. Hiroki Uejima, Masami Hagiya, Satoshi Kobayashi |
| 2001 | Insertion-Deletion P Systems. Shankara Narayanan Krishna, Raghavan Rama |
| 2001 | On P Systems with Global Rules. Andrei Paun |
| 2001 | Operation of a Purified DNA Nanoactuator. Friedrich C. Simmel, Bernard Yurke |
| 2001 | PNA-mediated Whiplash PCR. John A. Rose, Russell J. Deaton, Masami Hagiya, Akira Suyama |
| 2001 | PUNCH: An Evolutionary Algorithm for Optimizing Bit Set Selection. Adam J. Ruben, Stephen J. Freeland, Laura F. Landweber |
| 2001 | Patterns of Micronuclear Genes in ciliates. Andrzej Ehrenfeucht, Tero Harju, Ion Petre, Grzegorz Rozenberg |
| 2001 | Peptide Computing - Universality and Complexity. M. Sakthi Balan, Kamala Krithivasan, Y. Sivasubramanyam |
| 2001 | Population Computation and Majority Inference in Test Tube. Yasubumi Sakakibara |
| 2001 | Programmed Mutagenesis Is a Universal Model of Computation. Julia Khodor, David K. Gifford |
| 2001 | Solutions of Shortest Path Problems by Concentration Control. Masahito Yamamoto, Nobuo Matsuura, Toshikazu Shiba, Yumi Kawazoe, Azuma Ohuchi |
| 2001 | Solving Knapsack Problems in a Sticker Based Model. Mario J. Pérez-Jiménez, Fernando Sancho-Caparrini |
| 2001 | The Fidelity of the Tag-Antitag System. John A. Rose, Russell J. Deaton, Masami Hagiya, Akira Suyama |
| 2001 | Towards Optimization of PCR Protocol in DNA Computing. Satoshi Kashiwamura, Masashi Nakatsugawa, Masahito Yamamoto, Toshikazu Shiba, Azuma Ohuchi |
| 2001 | Towards an Electronic Implementation of Membrane Computing: A Formal Description of Non-deterministic Evolution in Transition P Systems. Angel V. Baranda, Fernando Arroyo, Juan Castellanos, Rafael Gonzalo |