| 2002 | A Better Method for Length Distribution Modeling in HMMs and Its Application to Gene Finding. Brona Brejová, Tomás Vinar |
| 2002 | Application of Lempel-Ziv Factorization to the Approximation of Grammar-Based Compression. Wojciech Rytter |
| 2002 | Block Merging for Off-Line Compression. Raymond Wan, Alistair Moffat |
| 2002 | Combinatorial Pattern Matching, 13th Annual Symposium, CPM 2002, Fukuoka, Japan, July 3-5, 2002, Proceedings Alberto Apostolico, Masayuki Takeda |
| 2002 | Constructing NFA s by Optimal Use of Positions in Regular Expressions. Lucian Ilie, Sheng Yu |
| 2002 | Edit Distance with Move Operations. Dana Shapira, James A. Storer |
| 2002 | Efficient Text Mining with Optimized Pattern Discovery. Hiroki Arimura |
| 2002 | Faster Bit-Parallel Approximate String Matching. Heikki Hyyrö, Gonzalo Navarro |
| 2002 | Identifying Occurrences of Maximal Pairs in Multiple Strings. Costas S. Iliopoulos, Christos Makris, Spyros Sioutas, Athanasios K. Tsakalidis, Kostas Tsichlas |
| 2002 | Local Similarity Based Point-Pattern Matching. Veli Mäkinen, Esko Ukkonen |
| 2002 | On the Complexity of Deriving Position Specific Score Matrices from Examples. Tatsuya Akutsu, Hideo Bannai, Satoru Miyano, Sascha Ott |
| 2002 | One-Gapped q-Gram Filtersfor Levenshtein Distance. Stefan Burkhardt, Juha Kärkkäinen |
| 2002 | Optimal Exact and Fast Approximate Two Dimensional Pattern Matching Allowing Rotations. Kimmo Fredriksson, Gonzalo Navarro, Esko Ukkonen |
| 2002 | Pattern Matching Problems over 2-Interval Sets. Stéphane Vialette |
| 2002 | Practical Software for Aligning ESTs to Human Genome. Jun Ogasawara, Shinichi Morishita |
| 2002 | Simple and Practical Sequence Nearest Neighbors with Block Operations. S. Muthukrishnan, Süleyman Cenk Sahinalp |
| 2002 | Space-Economical Algorithms for Finding Maximal Unique Matches. Wing-Kai Hon, Kunihiko Sadakane |
| 2002 | Statistical Identification of Uniformly Mutated Segments within Repeats. Süleyman Cenk Sahinalp, Evan E. Eichler, Paul W. Goldberg, Petra Berenbrink, Tom Friedetzky, Funda Ergün |
| 2002 | String Matching with Stopper Encoding and Code Splitting. Jussi Rautio, Jani Tanninen, Jorma Tarhio |
| 2002 | The Minimum DAWG for All Suffixes of a String and Its Applications. Shunsuke Inenaga, Masayuki Takeda, Ayumi Shinohara, Hiromasa Hoshino, Setsuo Arikawa |
| 2002 | The Problem of Context Sensitive String Matching. Venkatesan T. Chakaravarthy, Rajasekar Krishnamurthy |
| 2002 | Three Heuristics for delta-Matching: delta-BM Algorithms. Maxime Crochemore, Costas S. Iliopoulos, Thierry Lecroq, Wojciech Plandowski, Wojciech Rytter |
| 2002 | Towards Optimally Solving the LONGEST COMMON SUBSEQUENCE Problem for Sequences with Nested Arc Annotations in Linear Time. Jochen Alber, Jens Gramm, Jiong Guo, Rolf Niedermeier |
| 2002 | Two-Pattern Strings. Frantisek Franek, Jiandong Jiang, Weilin Lu, William F. Smyth |