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| 2025 | Alzheimer's Disease Risk Prediction in the Elderly: A Machine Learning Approach Combining Clinical Characteristics and Polygenic Risk Scores. Justin Bo-Kai Hsu, Cheng-Yang Lee, Jia-Ruey Tsai, Vijesh Kumar Yadav, Chuan Huang, Tzu-Hao Chang |
| 2025 | An Endoscopic Lesion Segmentation Improvement. Viet Dung Nguyen, Khanh Linh Do-Thi, Manh Duy Tran, Tam Anh Bui, Minh Duc Phan, Phuc Ngoc Pham, Nguyen Khang Ho |
| 2025 | Assessing Cardiac Functionality by Means of Interpretable AI and Myocardial Strain. Marco S. Nobile, Amalia Lupi, Leone Bacciu, Matteo Grazioso, Chiara Gallese, Emilio Quaia, Alessia Pepe |
| 2025 | BacCal GUI: Streamlining Virus Titration Calculations. Meng-Chi Chung, Tzong-Yuan Wu, Li-Ching Wu |
| 2025 | Balanced Benchmarking of Zero-Shot and RAG Approaches for Biomedical Term Normalization. Thanh Son Do, Daniel B. Hier, Tayo Obafemi-Ajayi |
| 2025 | Closed-Loop Brain-Controlled Exoskeleton System with a Hybrid Model for Stroke Rehabilitation. Yu-Wei Lin, Shi-Yong Luo, Po-Hsun Cheng, Chia-Hsin Chen, Zhi-Ting Chen, Yu-Zhen Liu, Li-Wei Ko |
| 2025 | CombDNF: Disease-Specific drug combination predictions with network-based features on clinically validated data. Pauline Hiort, Bernhard Y. Renard, Katharina Baum |
| 2025 | Continual Learning for Weakly-Supervised Histopathology Tissue Segmentation. Wei-Hua Li, Huei-Fang Yang, Chu-Song Chen |
| 2025 | Decoding Aging: Multi-Omics Insights into Oxidative Stress, Mitochondrial Dysfunction, and Cellular Senescence in Fibroblasts. Rajarshi Mandal, Ning Xie, Gil Alterovitz |
| 2025 | Deep Learning-Based Object Detection System for Vocal Cords in Laryngoscopy Images. Ying-Chang Wu, Sheng-Fu Liang, Cheng-Ming Hsu, Ming-Chi Cheng |
| 2025 | Development of a Sliding Window-Based Oversampling Framework for Convolutional Neural Network Sleep Stage Classification Using Polysomnographic Spectrogram Fusion. Ai Chung, Febryan Setiawan, Cheng-Yu Lin, Che-Wei Lin |
| 2025 | Drowsiness Detection based on Continuous State Transitions from Alertness to Sleep using Forehead EEG. Tsung-Hao Hsieh, Ting-Yu Chen, Sheng-Fu Liang |
| 2025 | EL-DRP: An Evolutionary Learning-Based Multi-Omics Framework for Drug Response Prediction with Interpretable Biomarker Selection. Yann-Jen Ho, Paik You Sheng, Yu-Ruo Chen, Yun Tang, Shinn-Ying Ho, Tzong-Yi Lee |
| 2025 | Enhancing Clinical Decision-Making: Integrating Multi-Agent Systems with Ethical AI Governance. Ying-Jung Chen, Ahmad Albarqawi, Chi-Sheng Chen |
| 2025 | Enhancing Machine Learning Models for Medical Coding: Diagnostic Codes Mapping and Synthetic Clinical Notes. Aikaterini Bilioni, Panagiotis Anagnostou, Sotiris K. Tasoulis, Spiros V. Georgakopoulos, Vassilis P. Plagianakos |
| 2025 | Establishing a Cross-Population Machine Learning Model for Alzheimer's Disease Risk Prediction in the Taiwanese Population. Justin Bo-Kai Hsu, Jia-Ruey Tsai, Shih-Han Hung, Cheng-Yang Lee, Chaur-Jong Hu, Tzu-Hao Chang |
| 2025 | Evaluating the Feasibility of Vision-Language Models in Skin Cancer Detection: A Comparative Study with CNNs and Vision Transformers. Yu-Hxiang Chen, Ting-Ting Chang, Yao-Zhi Xue, Wei-Hsiang Sung, Chia-Yu Lin |
| 2025 | Event-based Detection of Obstructive Sleep Apnea via YOLOv8 Nano and ECG Spectrograms: Integration with Home Sleep Apnea Test and Edge Computing. Ponpatcharee Nipattanon, Che-Wei Lin |
| 2025 | Explainable AI-Enhanced Kinase Activity Profiling Through Phosphoproteomics. Chia-Ru Chung, Ming-Feng Ho, Yun Tang, Li-Ching Wu, Justin Bo-Kai Hsu, Tzong-Yi Lee, Jorng-Tzong Horng |
| 2025 | Explainable Machine Learning for Failed Labor Induction Prediction Using Nationwide Insurance Data. Daniel Chriswinanto Adityo Nugroho, Septian D. Periska, Justinus A. Putranto, Jimmy I. Gunawan, Muhammad Solihuddin Muhtar, Jason C. Hsu, Yuan-Chii G. Lee, Emily Chia-Yu Su |
| 2025 | Finding Healthcare Provider Experts via Sheaf Laplacian. Mehmet Emin Aktas, Iraj Moradi, Esra Akbas, Mehmet Boyno |
| 2025 | GENESIS: Generating scRNA-Seq data from Multiome Gene Expression. Simone G. Riva, Brynelle Myers, Francesca M. Buffa, Andrea Tangherloni |
| 2025 | GSDeep-DTA: A Hybrid Graph and Sequence-based Deep Learning Framework for Robust Drug-Target Affinity Prediction. W. G. D. M. Samankula, Joanne Harvey, Binh P. Nguyen |
| 2025 | Helicobacter Pylori Infection Diagnosis from Endoscopic Images via Multi-Class Token based Multiple Instance Learning. Wei-Te Ting, Yu-Ching Tsai, Chun-Rong Huang, Hsiu-Chi Cheng, Bor-Shyang Sheu |
| 2025 | IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology, CIBCB 2025, Tainan, Taiwan, August 20-22, 2025 |
| 2025 | Improving the Efficiency and the Validity of Molecular Transformers. Leone Bacciu, Matteo Grazioso, Silvia Multari, Francesca Grisoni, Angelica Mazzolari, Marco S. Nobile |
| 2025 | Inductive models for structured output prediction of lncRNA-disease associations. Felipe Kenji Nakano, Livia Bertoni, Ricardo Cerri, Celine Vens |
| 2025 | Integrative Framework for Functional analysis of multiple Traditional Chinese Medicines based on transcriptome-driven systems biology and supervised learning strategy. Yun Tang, Chia-Ru Chung, Hsi-Yuan Huang, Yang-Chi-Dung Lin, Hua-Li Zuo, Jing Li, Liping Li, Siyao Hu, Hsiao-Chin Hong, Fei Wang, Jinrui Bai, Hsien-Da Huang |
| 2025 | Integrative Multi-Omics Prognostic Modeling of Glioma Recurrence Using Variational Autoencoder and Similarity Network Fusion. Phuong Lam Tran, Yun Tang, Justin Bo-Kai Hsu, Tzong-Yi Lee |
| 2025 | Intelligent Biomechanical Simulation of Bone Healing and Remodeling. Wai Yie Leong |
| 2025 | Investigating Forecasting Models for Pandemic Infections Using Heterogeneous Data Sources: A 2-year Study with COVID-19. Zacharias Komodromos, Kleanthis Malialis, Panayiotis Kolios |
| 2025 | Keypoint-Guided Ophidian Transformation for String-Shaped Data Augmentation. Tszyi Kwok, Brendan Park, Katharine Yagi, Anne Yagi, Chunsheng Yang, Min Liao, Yifeng Li |
| 2025 | Knowledge-Enriched Cell-Type Annotation in Single-Cell Transcriptomics via LLM Embeddings. Andrea Fabbricatore, Francesca M. Buffa, Andrea Tangherloni |
| 2025 | Let's Talk 'Bout Mutation: Evolutionary Programming for DNA Sequences. James Sargant, Michael Dubé, Sheridan K. Houghten, Steffen Graether |
| 2025 | Leveraging Diffusion-Based Models for Data Augmentation in Maternal-Fetal Ultrasound Classification. Wong Shi Hao, Tsung-Lu Michael Lee |
| 2025 | Leveraging Graph Information for Spatially Informed Patient Data Analysis with GIST. Gospel Ozioma Nnadi, Vincenzo Bonnici, Simone Avesani, Eva Viesi, Rosalba Giugno |
| 2025 | OSANet: Detection of Obstructive Sleep Apnea Episodes Using a DarkNet-Based Deep Learning Approach and Time-Frequency Spectrogram Features Derived from Single-Lead ECG. Febryan Setiawan, Che-Wei Lin |
| 2025 | REnformer, a single-cell ATAC-seq predicting model to investigate open chromatin sites. Simone G. Riva, Edward Sanders, Tom Wilson, Nicolò Stranieri, E. Ravza Gür, Matthew Baxter, Jim R. Hughes |
| 2025 | Rank Correlation and Cluster Testing in Multi-Objective Data Analysis of Medical Data. Rachel Ellen Brown, Qihao Shan, Klaus-Peter Stein, I. Erol Sandalciolgu, Sanaz Mostaghim |
| 2025 | SDPA++: A General Framework for Self-Supervised Denoising with Patch Aggregation. Nhat Huy Nguyen Minh, Triet Hoang Minh Dao, Chau Vinh Hoang Truong, Cuong Tuan Nguyen |
| 2025 | SHAP-Driven Deep Learning Identifies Pre-Symptomatic Influenza A Biomarkers: An Explainable AI Framework for Clinical Genomics. Tsung-Hsien Lin, Anna Zan, Zhi-Jian Cheng, Zhong-Ru Xie, Kuan Y. Chang |
| 2025 | Self-Attention Enhanced Deep Learning Models for Immune Cell Deconvolution from Bulk RNA-Seq. Chia-Ru Chung, Yen-Lin Chen, Yun Tang, Justin Bo-Kai Hsu, Li-Ching Wu, Tzong-Yi Lee, Jorng-Tzong Horng |
| 2025 | Short-term impacts of weather conditions on biomarkers among urban adults in Greece. Katerina Tsiaktani, Panagiotis Anagnostou, Sotiris K. Tasoulis, Spiros V. Georgakopoulos, John A. Gittings, Dionysios E. Raitsos, Athanasia Sergounioti, Vassilis P. Plagianakos |
| 2025 | Spiking Neural Networks for Mental Workload Classification with a Multimodal Approach. Jiahui An, Sara Irina Fabrikant, Giacomo Indiveri, Elisa Donati |
| 2025 | Synthetic data in AI-powered medical devices - the EU regulatory implications. Tomasz Braun, Dominika Ewa Harasimiuk |
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| 2025 | Vertebral compression Fracture Risk in Spinal Metastases Patients Following Stereotactic Body Radiotherapy Using Quantitative Imaging Data and Machine Learning. Dawit Gulta, Stephen Chen, Geoff Klein, Tayler D. Ross, Matthew Rezkalla, Daniel Moore F. Palhares, Laura Burgess, Jay Detsky, Arjun Sahgal, Cari M. Whyne, Michael R. Hardisty |
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| 2025 | miSAM: Robust MicroRNA Expression Estimation Using Bi-Objective Evolutionary Learning Algorithm in Cancer Transcriptomics. Yann-Lin Ho, Yann-Jen Ho, Shinn-Ying Ho, Tzong-Yi Lee |