| 2004 | A Xiao-hua Xu, Ling Chen, Yixin Chen |
| 2004 | A comparison of evolved finite state classifiers and interpolated Markov models for improving PCR primer design. Daniel A. Ashlock, Scott J. Emrich, Kenneth Mark Bryden, Steven M. Corns, Tsui-Jung Wen, Patrick S. Schnable |
| 2004 | A comparison of sequence alignment algorithms for measuring secondary structure similarity. L. Gwenn Volkert, Deborah Stoffer |
| 2004 | A memetic clustering algorithm for the functional partition of genes based on the gene ontology. Nora Speer, Christian Spieth, Andreas Zell |
| 2004 | A multifuzzy filtering approach to reliable gene expression profile analysis. Huseyin Seker |
| 2004 | A new distance metric and its application in phylogenetic tree construction. Wang Long-Hui, Liu Juan, Zhou Huai-Bei, Shi Feng |
| 2004 | A parallel evolutionary algorithm for RNA secondary structure prediction using stacking-energies (INN and INN-HB). Andrew Hendriks, Alain Deschênes, Kay C. Wiese |
| 2004 | A variant of SVM-RFE for gene selection in cancer classification with expression data. Kaibo Duan, Jagath C. Rajapakse |
| 2004 | An efficient method for fuzzy identification of regulatory events in gene expression time series data. L. Gwenn Volkert, Nawar Malhis |
| 2004 | Analyzing fuzzy partitions of Saccharomyces cerevisiae cell-cycle gene expression data by Bayesian validation method. Si-Ho Yoo, Chanho Park, Sung-Bae Cho |
| 2004 | Analyzing gene expression data for childhood medulloblastoma survival with artificial neural networks. Ajit Narayanan, Evangelia Nana, Ed Keedwell |
| 2004 | Classification of event-related potentials in individuals at risk for alcoholism using wavelet transform and artificial neural network. Carla D. Lopes, Josias O. Mainardi, Milton A. Zaro, Altamiro Amadeu Susin |
| 2004 | Cluster analysis of the p53 genetic regulatory network: topology and biology. Jennifer Hallinan |
| 2004 | Comparison of discrimination methods for peptide classification in tandem mass spectrometry. Anthony J. Bonner, Han Liu |
| 2004 | Comparison of dynamic programming and evolutionary algorithms for RNA secondary structure prediction. Alain Deschênes, Kay C. Wiese, Jagdeep Poonian |
| 2004 | Electronic nose inhibition in a spiking neural network for noise cancellation. Jacob N. Allen, Hoda S. Abdel-Aty-Zohdy, Robert L. Ewing |
| 2004 | Evolutionary approach to NOE paths assignment in RNA structure elucidation. Jacek Blazewicz, Marta Szachniuk, Adam Wójtowicz |
| 2004 | Evolutionary optimization of interval rules for drug design. Jürgen Paetz |
| 2004 | Extracting and mining protein-protein interaction network from biomedical literature. Xiaohua Hu, Illhoi Yoo, Il-Yeol Song, Min Song, Jianchao Han, Mark Lechner |
| 2004 | Factoring tertiary classification into binary classification improves neural network for protein secondary structure prediction. Wei Zhong, Gulsah Altun, Hae-Jin Hu, Robert W. Harrison, Phang C. Tai, Yi Pan |
| 2004 | Feature selection in proteomic pattern data with support vector machines. Kees Jong, Elena Marchiori, Michèle Sebag, Aad van der Vaart |
| 2004 | Gene expression correlation and gene ontology-based similarity: an assessment of quantitative relationships. Haiying Wang, Francisco Azuaje, Olivier Bodenreider, Joaquín Dopazo |
| 2004 | Genetic network reverse-engineering and network size; can we identify large GRNs? Carey Pridgeon, David Corne |
| 2004 | Granular support vector machines for medical binary classification problems. Yuchun Tang, Bo Jin, Yi Sun, Yan-Qing Zhang |
| 2004 | Graphical approach for motif recognition in DNA sequences. Xiao Yang, Jagath C. Rajapakse |
| 2004 | Grouping and visualizing human endogenous retroviruses by bootstrapping median self-organizing maps. Merja Oja, Göran O. Sperber, Jonas Blomberg, Samuel Kaski |
| 2004 | High sensitivity technique for translation initiation site detection. Loi Sy Ho, Jagath C. Rajapakse |
| 2004 | Identification of botanical specimens using artificial neural networks. Jonathan Y. Clark |
| 2004 | Inferring neutral evolution from Parkinson's disease genes. Gavyn Pang, Jagath C. Rajapakse |
| 2004 | Locally sensitive backtranslation based on multiple sequence alignment. Rosalba Giugno, Alfredo Pulvirenti, Marco Ragusa, Loredana Facciola, Laura Patelmo, Valentina Di Pietro, Cinzia Di Pietro, Michele Purrello, Alfredo Ferro |
| 2004 | Model and feature selection in microarray classification. David A. Peterson, Michael H. Thaut |
| 2004 | Multiclass protein fold recognition using multiobjective evolutionary algorithms. Stanley Y. M. Shi, Ponnuthurai N. Suganthan, Kalyanmoy Deb |
| 2004 | Multiple DNA sequence approximate matching. Kathleen M. Kaplan, John J. Kaplan |
| 2004 | Preface to the proceedings. David B. Fogel |
| 2004 | Proceedings of the 2004 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, CIBCB 2004, La Jolla, CA, USA, October 7-8, 2004 |
| 2004 | Protein family classification using structural and sequence information. Scott F. Smith |
| 2004 | Secret sequence comparison in distributed computing environments by interval sampling. Ken-ichi Kurata, Vincent Breton, Hiroshi Nakamura |
| 2004 | Self-adaptive evolutionary algorithm based methods for quantification in metabolic systems. Jing Yang, Sarawan Wongsa, Visakan Kadirkamanathan, Stephen A. Billings, Phillip C. Wright |
| 2004 | Statistical neural networks and support vector machine for the classification of genetic mutations in ovarian cancer. Muhammad Shoaib B. Sehgal, Iqbal Gondal, Laurence Dooley |
| 2004 | Transmembrane segments prediction with support vector machine based on high performance encoding schemes. Hae-Jin Hu, Robert W. Harrison, Phang C. Tai, Yi Pan |
| 2004 | Two-stage support vector machines to protein relative solvent accessibility prediction. Minh Ngoc Nguyen, Jagath C. Rajapakse |