| 2010 | 10th IEEE International Conference on Bioinformatics and Bioengineering, BIBE 2010, Philadelphia, Pennsylvania, USA, May 31-June 3 2010 |
| 2010 | 3D Representation of the Digestive Tract Surface in Wireless Capsule Endoscopy Videos. Alexandros Karargyris, Orestis Karargyris, Nikolaos G. Bourbakis |
| 2010 | A Clustering Approach to Identify Intergenic Non-coding RNA in Mouse Macrophages. Lana X. Garmire, Shankar Subramaniam, David G. Garmire, Christopher K. Glass |
| 2010 | A Comparative Study of a Novel AE-nLMS Filter and Two Traditional Filters in Predicting Respiration Induced Motion of the Tumor. Ke Huang, Ivan Buzurovic, Yan Yu, Tarun Kanti Podder |
| 2010 | A Comparison between Transmembrane Helices and Reentrant Loops. Changhui Yan, Jingru Luo |
| 2010 | A Multi-stage Spectral Alignment Strategy for Unrestrictive PTM Peptide Identification. Changyong Yu, Guoren Wang, Yuhai Zhao, Keming Mao |
| 2010 | A Noninvasive Multimodal Sono-contrast NIR Spectroscopy System for Breast Cancer Diagnosis. Kai Guo Yan, Tarun Kanti Podder, Ke Huang, Yan Yu, Lydia Liao |
| 2010 | A Novel Wavelet Based Algorithm for Spike and Wave Detection in Absence Epilepsy. Petros Xanthopoulos, Steffen Rebennack, Chang-Chia Liu, Jicong Zhang, Gregory L. Holmes, Basim M. Uthman, Panos M. Pardalos |
| 2010 | A Self-Healing Approach for a Domain-Specific Deep Web Search Tool. Fan Wang, Gagan Agrawal |
| 2010 | A Supervised Approach for Predicting Patient Survival with Gene Expression Data. Karthik Devarajan, Yan Zhou, Neeraj Chachra, Nader Ebrahimi |
| 2010 | An Accurate Prediction Method for Protein Structural Class from Signal Patterns of NMR Spectra in the Absence of Chemical Shift Assignments. Hiromi Arai, Naoya Tochio, Tsuyoshi Kato, Takanori Kigawa, Masayuki Yamamura |
| 2010 | An Elastic Video Interpolation Methodology for Wireless Capsule Endoscopy Videos. Alexandros Karargyris, Nikolaos G. Bourbakis |
| 2010 | Analysis and Optimization of C3 Photosynthetic Carbon Metabolism. Giovanni Stracquadanio, Renato Umeton, Alessio Papini, Pietro Liò, Giuseppe Nicosia |
| 2010 | Analysis on the Correlation Relationships between the Temperature Range Condition and the Genic GC Content Levels of Prokaryotes. Hao Zheng, Hongwei Wu |
| 2010 | Assessment of the Binding Characteristics of Human Immunodeficiency Virus Type 1 Glycoprotein120 and Host Cluster of Differentiation4 Using Digital Signal Processing. Norbert Nwankwo, Huseyin Seker |
| 2010 | Automated Quantification of Muscle and Fat in the Thigh from Water-, Fat- and Non-suppressed MR Images. Sokratis Makrogiannis, Suraj Serai, Kenneth W. Fishbein, Willie Laney, Catherine Schreiber, William B. Ershler, Luigi Ferrucci, Richard G. S. Spencer |
| 2010 | BLAST Tree: Fast Filtering for Genomic Sequence Classification. Stuart King, Yanni Sun, James R. Cole, Sakti Pramanik |
| 2010 | Chinese Cardiovascular Disease Database (CCDD) and Its Management Tool. Jiawei Zhang, Liping Wang, Xia Liu, Hong-hai Zhu, Jun Dong |
| 2010 | Combining Prostate Cancer Region Predictions from MALDI Spectra Processing and Texture Analysis. Jiang Li, Ayyappa Vadlamudi, Shao-Hui Chuang, Xiaoyan Sun, Bo Sun, Frederic D. McKenzie, Lisa H. Cazares, Julius Nyalwidhe, Dean Troyer, O. John Semmes |
| 2010 | Comparison of Co-temporal Modeling Algorithms on Sparse Experimental Time Series Data Sets. Edward E. Allen, James L. Norris, David J. John, Stan J. Thomas, William H. Turkett Jr., Jacquelyn S. Fetrow |
| 2010 | Comparison of Gene Prediction Programs for Metagenomic Data. Non Yok, Gail Rosen |
| 2010 | Compressed q-Gram Indexing for Highly Repetitive Biological Sequences. Francisco Claude, Antonio Fariña, Miguel A. Martínez-Prieto, Gonzalo Navarro |
| 2010 | Computational Framework for Microstructural Bone Dynamics Model and Its Evaluation. Taehyong Kim, Woochang Hwang, Aidong Zhang, Murali Ramanathan |
| 2010 | Corpus Callosum Shape Deformation Analysis for Multiple Sclerosis. |
| 2010 | Detecting Coevolution of Functionally Related Proteins for Automated Protein Annotation. Alan L. Kwan, Susan K. Dutcher, Gary D. Stormo |
| 2010 | Detection of Errors and Inconsistencies in Biomolecular Databases through Integrative Approaches and Quality Controls. Marco Masseroli, Giorgio Ghisalberti, Luca Tettamanti |
| 2010 | Detection of Mild Cognitive Impairment Using Image Differences and Clinical Features. Lin Li, James Z. Wang, Dheeraj Chahal, Mark A. Eckert, Carl Lozar |
| 2010 | Dynamic Complexity of the Temporal Transcriptional Regulation Program in Human Endotoxemia. Tung T. Nguyen, Panagiota T. Foteinou, Ioannis P. Androulakis, Steve E. Calvano, Stephen F. Lowry |
| 2010 | Effects of Triadimefon on the Metabolism of Cultured Hepatocytes. Vidya V. Iyer, Ioannis P. Androulakis, Charles M. Roth, Marianthi G. Ierapetritou |
| 2010 | Estimating the Expression of Transcript Isoforms from mRNA-Seq via Nonnegative Least Squares. Hyunsoo Kim, Yingtao Bi, Ramana V. Davuluri |
| 2010 | Ethanol Effects on Transcription Factor Network Regulating Stem Cell Differentiation. Rajanikanth Vadigepalli, Joshua Ogony, Helen Anni |
| 2010 | Fast Phased Small RNA Cycle Counting Algorithms. Forrest Sheng Bao, Zhixin Xie, Yuanlin Zhang |
| 2010 | Finding Dynamic Modules of Biological Regulatory Networks. Ferhat Ay, Thang N. Dinh, My T. Thai, Tamer Kahveci |
| 2010 | Functional Flow Simulation Based Analysis of Protein Interaction Network. Lei Shi, Young-Rae Cho, Aidong Zhang |
| 2010 | Gene Set Analysis with Covariates. Ionut Bebu, Françoise Seillier-Moiseiwitsch, Jing Wu, Thomas Mathew |
| 2010 | How to Fold Amino Acid Interaction Networks by Computational Intelligence Methods. Omar Gaci |
| 2010 | Hybrid Modeling and Simulation of Insulin Secretion Pathway in Pancreatic Islets. Yang Pu, Saangho Lee, David C. Samuels, Layne T. Watson, Yang Cao |
| 2010 | Identification of Viral Protein Genotypic Determinants Using Combinatorial Filtering and Active Learning. Chuang Wu, Andrew S. Walsh, Roni Rosenfeld |
| 2010 | Identifying Hidden Confounders in Gene Networks by Bayesian Networks. Tomoya Higashigaki, Kaname Kojima, Rui Yamaguchi, Masato Inoue, Seiya Imoto, Satoru Miyano |
| 2010 | Identifying Prostate Cancer-Related Networks from Microarray Data Based on Genotype-Phenotype Networks Using Markov Blanket Search. Hsiang-Yuan Yeh, Yi-Yu Liu, Cheng-Yu Yeh, Von-Wun Soo |
| 2010 | Improved Immune Genetic Algorithm for Clustering Protein-Protein Interaction Network. Hamid Ravaee, Ali Masoudi-Nejad, Saeed Omidi, Ali Moeini |
| 2010 | Inferring the Sign of Kinase-Substrate Interactions by Combining Quantitative Phosphoproteomics with a Literature-Based Mammalian Kinome Network. Marylens Hernandez, Alexander Lachmann, Shan Zhao, Kunhong Xiao, Avi Ma'ayan |
| 2010 | Instance Discovery and Schema Matching with Applications to Biological Deep Web Data Integration. Tantan Liu, Fan Wang, Gagan Agrawal |
| 2010 | Knowledge-Guided Docking of Flexible Ligands to SH2 Domain Proteins. Haiyun Lu, Shamima Banu Bte Sm Rashid, Hao Li, Wee Kheng Leow, Yih-Cherng Liou |
| 2010 | Learning Proteomic Network Structure by a New Hill Climbing Algorithm. Dong-Chul Kim, Jean Gao, Chin-Rang Yang |
| 2010 | Methods for Designing Reliable Probe Arrays. Michele Lombardi, Luca Benini, Abhishek Garg, Giovanni De Micheli |
| 2010 | Modeling Circadian Rhythms in Inflammation. Jeremy D. Scheff, Ioannis P. Androulakis, Steve E. Calvano, Stephen F. Lowry |
| 2010 | Modular Software Design for Brachytherapy Image-Guided Robotic Systems. Ivan Buzurovic, Tarun Kanti Podder, Lei Fu, Yan Yu |
| 2010 | Multi Level Clustering of Phylogenetic Profiles. Fotis E. Psomopoulos, Pericles A. Mitkas |
| 2010 | Multichannel Robot for Image-Guided Brachytherapy. Tarun Kanti Podder, Ivan Buzurovic, Yan Yu |
| 2010 | On Constructing Thermodynamically Consistent Parametrizations of Kinetic Models. W. Garrett Jenkinson, John Goutsias |
| 2010 | Partial AUC for Differentiated Gene Detection. Zhenqiu Liu, Terry Hyslop |
| 2010 | Polony Identification Using the EM Algorithm Based on a Gaussian Mixture Model. Wei Li, Paul M. Ruegger, James Borneman, Tao Jiang |
| 2010 | Prediction of Catalytic Residues in Proteins Using a Consensus of Prediction (CoP) Approach. Natalia V. Petrova, Cathy H. Wu |
| 2010 | Prediction of Gene Ontology Annotations Based on Gene Functional Clustering. Marco Tagliasacchi, Roberto Sarati, Marco Masseroli |
| 2010 | Qualitative Analysis of Gene Regulatory Networks by Satisfiability Checking of Linear Temporal Logic. Sohei Ito, Naoko Izumi, Shigeki Hagihara, Naoki Yonezaki |
| 2010 | Quantification and Analysis of Combination Drug Synergy in High-Throughput Transcriptome Studies. Zeynep H. Gümüs, Fernando Siso-Nadal, Ada Gjrezi, Paul McDonagh, Iya Khalil, Paraskevi Giannakakou, Harel Weinstein |
| 2010 | Space Efficient Diagonal Linear Space Sequence Alignment. Gandhi Arpit, Raghavendra Adiga, Kuruvilla Varghese |
| 2010 | Structural Differences between Proteins with Similar Sequences. Qian Cong, Bong-Hyun Kim, Lisa N. Kinch, Nick V. Grishin |
| 2010 | TRAC: A Platform for Structure-Function Studies of NSS-Proteins Integrates Information from Bioinformatics and Biomedical Literature. Lei Shi, Marko Srdanovic, Thijs Beuming, Lucy Skrabanek, Jonathan A. Javitch, Harel Weinstein |
| 2010 | The Effect of Sequence Error and Partial Training Data on BLAST Accuracy. Steven D. Essinger, Gail L. Rosen |
| 2010 | Towards Temperature Dependent Coarse-grained Potential of Side-chain Interactions for Protein Folding Simulations. Stanislaw Oldziej, Cezary Czaplewski, Adam Liwo, Harold A. Scheraga |
| 2010 | Tumor Motion Prediction and Tracking in Adaptive Radiotherapy. Ivan Buzurovic, Tarun Kanti Podder, Ke Huang, Yan Yu |
| 2010 | Use of Hilbert Huang Transform in Uterine Contraction Analysis. Kemal Aydin, Rustu Murat Demirer, Coskun Bayrak |
| 2010 | Using the Semantically Interoperable Biospecimen Repository Application, caTissue: End User Deployment Lessons Learned. Jack W. London, Devjani Chatterjee |
| 2010 | eSBH: An Accurate Constructive Heuristic Algorithm for DNA Sequencing by Hybridization. Yang Chen, Jinglu Hu |