| 2007 | 3D Spectrum Analysis of DNA Sequence: Application to Caenorhabditis elegans Genome. Afef Elloumi Oueslati, Noureddine Ellouze, Zied Lachiri |
| 2007 | A 2D Vibration Array as an Assistive Device for Visually Impaired. Dimitrios Dakopoulos, Sanjay K. Boddhu, Nikolaos G. Bourbakis |
| 2007 | A Compartmentalized Approach to the Assembly of Physical Maps. Serdar Bozdag, Timothy J. Close, Stefano Lonardi |
| 2007 | A Comprehensive Fuzzy-Based Framework for Cancer Microarray Data Gene Expression Analysis. Zhenyu Wang, Vasile Palade |
| 2007 | A Computational Approach to Understand Arabidopsis thaliana and Soybean Resistance to Fusarium solani (Fsg). Jiazheng Yuan, Mengxia Zhu, M. Javed Iqbal, Jack Y. Yang, David A. Lightfoot |
| 2007 | A Computer Aided Tool for the Assessment of Human Sperm Morphology. Henry Carrillo, Jorge Villarreal, Miguel Sotaquira, Alvaro Goelkel, Ricardo Gutierrez |
| 2007 | A Flexible Stem-Based Local Search Algorithm for Predicting RNA Secondary Structures Including Pseudoknots. Xiang Chen, Simin He, Dongbo Bu, Runsheng Chen, Wen Gao |
| 2007 | A Framework for Mass Spectral Quality Assessment without Prior Information. Fang-Xiang Wu, Jiarui Ding, Guy G. Poirier |
| 2007 | A Geometrical Model for the SNP Motif Identification Problem. Gaofeng Huang, Peter Jeavons |
| 2007 | A Heuristic for Phylogenetic Reconstruction Using Transposition. Feng Yue, Meng Zhang, Jijun Tang |
| 2007 | A Hierarchical Grow-and-Match Algorithm for Backbone Resonance Assignments Given 3D Structure. Fei Xiong, Chris Bailey-Kellogg |
| 2007 | A Machine Learning Approach for Prediction of Lipid-Interacting Residues in Amino Acid Sequences. Stephanie Jimenez Irausquin, Liangjiang Wang |
| 2007 | A Machine Learning Approach to Pharmacological Profiling of the Quinone Scaffold in the NCI Database: A Compound Class Enriched in Those Effective Against Melanoma and Leukemia Cell Lines. M. L. Ujwal, Patrick Hoffman, Kenneth A. Marx |
| 2007 | A Mixture of Experts Method for Predicting Domain Boundaries in Proteins. Ian MacDonald, George Berg |
| 2007 | A Modified Fuzzy Kohonen's Competitive Learning Algorithms Incorporating Local Information for MR Image Segmentation. Jun Kong, Wenjing Lu, Jianzhong Wang, Na Che, Yinghua Lu |
| 2007 | A Modified Uniformization Method for the Chemical Master Equation. Jingwei Zhang, Layne T. Watson |
| 2007 | A Multi-Objective Genetic Algorithm that Employs a Hybrid Approach for Isolating Codon Usage Bias Indicative of Translational Efficiency. Douglas W. Raiford, Dan E. Krane, Travis E. Doom, Michael L. Raymer |
| 2007 | A New Alignment-Independent Algorithm for Clustering Protein Sequences. Abdellali Kelil, Shengrui Wang, Ryszard Brzezinski |
| 2007 | A New Hybrid Technique for Dermatological Image Registration. Heng Huang, Paul R. Bergstresser |
| 2007 | A New Smoothing Model for Analyzing Array CGH Data. Nha Nguyen, Heng Huang, Soontorn Oraintara, An P. N. Vo |
| 2007 | A Novel Approach for Signal Transduction Networks Simulation at a Mesoscopic Level. Chenxi Shao, Hongli Deng |
| 2007 | A Novel Sequence-Structure Approach for Accurate Prediction of Resistance to HIV-1 Protease Inhibitors. Majid Masso, Iosif I. Vaisman |
| 2007 | A PQRM-based PACS System for Advanced Medical Services under Grid Environment. Yong-Jie Ni, Chan-Hyun Youn, Byoung-Jin Kim, Youngjoo Han, Peng Liu |
| 2007 | A Preliminary Study of Correlation between Depth and Path Length of GO Nodes with Gene Sequence Similarity. Elham Khabiri |
| 2007 | A Proposed Statistical Protocol for the Analysis of Metabolic Toxicological Data Derived from NMR Spectroscopy. Benjamin J. Kelly, Paul E. Anderson, Nicholas V. Reo, Nicholas J. DelRaso, Travis E. Doom, Michael L. Raymer |
| 2007 | A Reliable Metric for Quantifying Multiple Sequence Alignment. Ken D. Nguyen, Yi Pan |
| 2007 | A Robotic System for Real-time Tumor Manipulation During Image guided Breast Biopsy. Vishnu Mallapragada, Nilanjan Sarkar, Tarun Kanti Podder |
| 2007 | A Robust Method for Generating Discriminative Gene Clusters. Min Xu, Louxin Zhang, Pei Li Joe Zhou |
| 2007 | A Simulation-Based 3D Axon Axis Extraction in Confocal Fluorescence Microscopy Images. Kai Zhang, Hongkai Xiong, Xiaobo Zhou |
| 2007 | A Structure Learning Algorithm for Inference of Gene Networks from Microarray Gene Expression Data Using Bayesian Networks. Kazuyuki Numata, Seiya Imoto, Satoru Miyano |
| 2007 | A Suffix Tree Construction Algorithm for DNA Sequences. Hongwei Huo, Vojislav Stojkovic |
| 2007 | A Systematic Approach to Quantifying Evolutionary Functional Trends Across the Universal Tree of Life. Gil Alterovitz, Taro Muso, Paresh Malalur, Marco Ramoni |
| 2007 | A Tale of Intronless Genes in Eukaryotic Genomes. Meena K. Sakharkar, Kishore R. Sakharkar |
| 2007 | A Two-Stage Gene Selection Algorithm by Combining ReliefF and mRMR. Yi Zhang, Chris H. Q. Ding, Tao Li |
| 2007 | A comparison between traditional shift-and-add (SAA) and point-by-point back projection (BP) -- relevance to morphology of microcalcifications for isocentric motion in Digital Breast tomosynthesis (DBT). Ying Chen, Joseph Y. Lo, James T. Dobbins |
| 2007 | Advancements in Automated Diagnostic Mammography. Walker H. Land Jr., Alda Mizaku, Thomas Raway, John J. Heine, Claudia Berman, Nataliya Kovalchuk |
| 2007 | Alternative Splicing: Associating Frequency with Isoforms. Anuradha Roy, Jennifer L. Leopold, Anne M. Maglia |
| 2007 | Amino Acid Substitution Matrices Based on 4-Body Delaunay Contact Profiles. Ahmet Sacan, Ismail Hakki Toroslu |
| 2007 | An Algorithm for Mining Fuzzy Association Rules Based on Immune Principles. Lei Zhang, Renhou Li |
| 2007 | An Effective Interwoven Loop Design Application for Two-Channel Microarray Experiments. Mehdi Pirooznia, Arun Rawat, Jack Y. Yang, Mary Qu Yang, Ping Gong, Edward J. Perkins, Youping Deng |
| 2007 | An Efficient Compression Method for Multiplanar Reformulated Biomedical Images. Qiang Shawn Cheng, Mehdi R. Zargham |
| 2007 | An Efficient Modeling and Simulation System on the Kidney Matching, Distribution and Exchange Problems. Siyuan Liu, Chao Liu, Yu Liu, Chunzhe Zhao |
| 2007 | An Empirical CDF Approach to Estimate the Significance of Gene Ranking for Finding Differentially Expressed Genes. Jahangheer S. Shaik, E. Olusegun George, Mohammed Yeasin |
| 2007 | An End-to-End Process for Cancer Identification from Images of Lung Tissue. Walker H. Land Jr., Daniel W. McKee, Tatyana Zhukov, Dansheng Song, Wei Qian |
| 2007 | An HV-SVM Classifier to Infer TF-TF Interactions Using Protein Domains and GO Annotations. Xiaoli Li, Jun-Xiang Lee, Bharadwaj Veeravalli, See-Kiong Ng |
| 2007 | An Improved Ant Colony Optimization Algorithm Based on Route Optimization and Its Applications in Travelling Salesman Problem. Yi Zhang, Zhi-Li Pei, Jinhui Yang, Yanchun Liang |
| 2007 | An Intelligent System for Searching Genomic Sequences. Vandana Gummuluru, Su-shing Chen |
| 2007 | An Investigation into the Feasibility of Detecting Microscopic Disease Using Machine Learning. Mary Qu Yang, Jack Y. Yang |
| 2007 | An Overview of Bidirectional Promoters. Mary Qu Yang, Laura Elnitski |
| 2007 | An efficient data structure for applying multiple seeds in homology search. Alireza Hadj Khodabakhshi, Mehdi Mirzazadeh, Arvind Gupta |
| 2007 | Analysis of cardiac wall motion estimation methods. Soroor Behbahani, Keivan Magholi |
| 2007 | Application of Wavelet Transform to the MS-based Proteomics Data Preprocessing. Pan Du, Simon M. Lin, Warren A. Kibbe, Haihui Wang |
| 2007 | Assessing the Performance of Macromolecular Sequence Classifiers. Cornelia Caragea, Jivko Sinapov, Vasant G. Honavar, Drena Dobbs |
| 2007 | Automatically Extracting Acronyms from Biomedical Text. Jared Fox, Nik Brown |
| 2007 | BALBOA: Extending Bicluster Analysis to Classify ORFs using Expression Data. Kenneth Bryan, Padraig Cunningham |
| 2007 | Bio-Nano-Info Integration for Personalized Medicine. Eric Jakobsson, May D. Wang, Linda K. Molnar |
| 2007 | Biological Mechanism on a Chip: Modeling and Realization of Growth Hormone Secretion Mechanism. John R. Shell, Yonglian Wang, Nazeih M. Botros |
| 2007 | Biomarker Selection for Predicting Alzheimer Disease Using High-Resolution MALDI-TOF Data. Jung Hun Oh, Young Bun Kim, Prem Gurnani, Kevin P. Rosenblatt, Jean Gao |
| 2007 | Biomedical Literature Mining. Xiaohua Hu |
| 2007 | Biometrics Intelligence Information Systems and Applications. Patrick S. P. Wang |
| 2007 | Biostatistical Considerations of the Use of Genomic DNA Reference in Microarrays. Yunfeng Yang, Michelle M. Zhu, Liyou Wu, Jizhong Zhou |
| 2007 | Bottom-Up Multiple Row Addition Algorithms for the Biclustering-Problem. Hyung-Won Koh, Lars Hildebrand |
| 2007 | Calcium De-blooming in Coronary CT Image. Zhuangli Liang, W. Clem Karl, Synho Do, Udo Hoffmann, Thomas J. Brady, Homer H. Pien |
| 2007 | Characterization of MYC expression in gefitinib versus Acute Myeloid Leukemia reveals novel therapeutic targets. James F. Courage, Saurabh Gupta, Yufeng Wang |
| 2007 | Characterizing and Predicting Catalytic Residues in Enzyme Active Sites Based on Local Properties: A Machine Learning Approach. Leonardo Bobadilla, Fernando Niño, Edilberto Cepeda, Manuel A. Patarroyo |
| 2007 | Classification of Enzyme Function from Protein Sequence based on Feature Representation. Bum Ju Lee, Heon Gyu Lee, Jong Yun Lee, Keun Ho Ryu |
| 2007 | Cluster Analysis of Regulatory Sequences with a Log Likelihood Ratio Statistics-based Similarity Measure. Huiru Zheng, Haiying Wang, Jinglu Hu |
| 2007 | Combined expression data with missing values and gene interaction network analysis: a Markovian integrated approach. Juliette Blanchet, Matthieu Vignes |
| 2007 | Combining Semantics, Context, and Statistical Evidence in Genomics Literature Search. Jay Urbain, Nazli Goharian, Ophir Frieder |
| 2007 | Comparing Cancer and Normal Gene Regulatory Networks Based on Microarray Data and Transcription Factor Analysis. Yu-Chun Lin, Hsiang-Yuan Yeh, Shih-Wu Cheng, Von-Wun Soo |
| 2007 | Complete Backtranslation of Oligopeptides for Metabolic Pathways Exploration of Complex Environments using Functional Microarrays. Mohieddine Missaoui, David R. C. Hill, Cécile Militon, Pierre Peyret |
| 2007 | Complexity-theoretic Modeling of Biological Cyanide Poisoning as Security Attack in Self-organizing Networks. Jiejun Kong, Xiaoyan Hong, Dapeng Wu, Mario Gerla |
| 2007 | Computational Genome-Wide Discovery of Aberrant Splice Variations with Exon Expression Profiles. Ryo Yoshida, Kazuyuki Numata, Seiya Imoto, Masao Nagasaki, Atsushi Doi, Kazuko Ueno, Satoru Miyano |
| 2007 | Computational Identification of Cis-regulatory Elements Associated with Pungency of Chili Peppers. Tieming Ji, Desh Ranjan, Jeanne Curry, Mary O'Connell |
| 2007 | Computer Aided Histopathological Classification of Cancer Subtypes. Sohaib Waheed, Richard A. Moffitt, Qaiser Chaudry, Andrew N. Young, May D. Wang |
| 2007 | Consistent Modeling, Integration and Simulation of Molecular Interaction Networks in Space-Time Dimension. Rui Chang |
| 2007 | Constrained RNA Structural Alignment: Algorithms and Application to Motif Detection in the Untranslated Regions of Trypanosoma brucei mRNAs. Mugdha Khaladkar, Vivian Bellofatto, Jason Tsong-Li Wang, Vandanaben Patel, Marvin K. Nakayama |
| 2007 | Cooperative Partitional-Divisive Clustering and Its Application in Gene Expression Analysis. Rasha F. Kashef, Mohamed S. Kamel |
| 2007 | Database Approaches and Data Representation in Structural Bioinformatics. Kreshna Gopal, James C. Sacchettini, Thomas R. Ioerger |
| 2007 | Decision Fusion of Circulating Markers for Breast Cancer Detection in Premenopausal Women. Jonathan L. Jesneck, Sayan Mukherjee, Loren W. Nolte, Anna E. Lokshin, Jeffrey R. Marks, Joseph Y. Lo |
| 2007 | Decoding Novel Genomes: From Microbiomes to the Eukaryota. Mark Borodovsky |
| 2007 | Denoising of Array-Based DNA Copy Number Data Using The Dual-tree Complex Wavelet Transform. Nha Nguyen, Heng Huang, Soontorn Oraintara, Yuhang Wang |
| 2007 | Detecting and Assessing Conserved Stems for Accurate Structural Alignment of RNA Sequences. Xiaoyong Fang, Zhigang Luo, Bo Yuan, Zhenghua Wang |
| 2007 | Detection and Prediction of Alternative Splicing within Acceptor/Donor Sites in pre-mRNA of Arabidopsis thaliana. Minseo Park, Deane L. Falcone, Kil-Young Yun, Karen M. Daniels |
| 2007 | Determining Domain Similarity and Domain-Protein Similarity Using Functional Similarity Measurements of Gene Ontology Terms. Lisa M. Guntly, Jennifer L. Leopold, Anne M. Maglia |
| 2007 | Differential Scoring for Systolic Sequence Alignment. Antonio E. de la Serna |
| 2007 | Discrete Methods for Association Search and Status Prediction in Genotype Case-Control Studies. Dumitru Brinza, Alexander Zelikovsky |
| 2007 | Distance Preserving Dimension Reduction Using the QR Factorization or the Cholesky Factorization. Hyunsoo Kim, Haesun Park, Hongyuan Zha |
| 2007 | Distributed Wireless Sensors on the Human Body. Ruzena Bajcsy |
| 2007 | Dynamic Load Balancing for Mining of Molecular Structures using Genetic Algorithm. Salahuddin Mohammad Masum, Mohammed Yeasin |
| 2007 | Efficient Methods for Biomedical Named Entity Recognition. Shing-Kit Chan, Wai Lam |
| 2007 | Engineering Multifunctional Biologically-Amenable Nanomaterials for Interfacial Therapeutic Delivery and Substrate-Based Cellular Interrogation. Mark Chen, Brian Huang, Eric Shin, Erik Robinson, Erik Pierstorff, Houjin Huang, Dean Ho |
| 2007 | Ensemble of Kernel Based Classifiers to Improve the Human Cancer Prediction using DNA Microarrays. Ángela Blanco, Manuel Martín-Merino, Javier De Las Rivas |
| 2007 | Ensemble of Probabilistic Neural Networks for Protein Fold Recognition. Yuehui Chen, Xueqin Zhang, Mary Qu Yang, Jack Y. Yang |
| 2007 | Estimating Classification Error to Identify Biomarkers in Time Series Expression Data. John H. Phan, May D. Wang |
| 2007 | Evidence for Proximal to Distal Appendage Amputation Site Effects from Global Gene Expression Correlations Found in Newt Microarrays. Kenneth A. Marx, John Sharko, Georges G. Grinstein, Shannon Odelberg, Hans-Georg Simon |
| 2007 | Evolving Biological Behavior in Gene-Based Cellular Simulations. John H. Phan, Richard A. Moffitt, Todd H. Stokes, May D. Wang |
| 2007 | Exploring Cardioneural Signals from Noninvasive ECG Measurement. Amirali Shayan Arani, Yi Zhu, Yi-Ning Cheng, Chung-Kuan Cheng, Shien-Fong Lin, Peng-Sheng Chen |
| 2007 | Exploring Topological Properties of NMR Graphs. Paulius Micikevicius, Narsingh Deo |
| 2007 | FPGA Acceleration of Phylogeny Reconstruction for Whole Genome Data. Jason D. Bakos, Panormitis E. Elenis, Jijun Tang |
| 2007 | False Discovery Rates in Identifying Functional DNA Motifs. Osman Abul, Geir Kjetil Sandve, Finn Drabløs |
| 2007 | Fast Computation of Human Genetic Linkage. Hongling Wang, Alberto Maria Segre, Yungui Huang, Jeffrey R. O'Connell, Veronica J. Vieland |
| 2007 | Fast and Robust Detection of Epilepsy in Noisy EEG Signals Using Permutation Entropy. Iman Veisi, Naser Pariz, Ali Karimpour |
| 2007 | Feature Estimation for Vocal Fold Edema Detection Using Short-Term Cepstral Analysis. Benedito G. Aguiar Neto, Joseana M. Fechine, Silvana Cunha Costa, Menaka Muppa |
| 2007 | Feature Extraction and Parameters Selection of Classification Model on Brain-Computer Interface. Mingyuan Zhao, Mingtian Zhou, Qingxin Zhu, Ping Yang |
| 2007 | Feature Reduction for Gene Regulatory Network Control. Mehmet Tan, Faruk Polat, Reda Alhajj |
| 2007 | Feature Selection and Partial Least Squares Based Dimension Reduction for Tumor Classification. Hualong Bu, Guo-Zheng Li, Xue-Qiang Zeng, Jack Y. Yang, Mary Qu Yang |
| 2007 | Finding Cancer-Related Gene Combinations Using a Molecular Evolutionary Algorithm. Chan-Hoon Park, Soo-Jin Kim, Sun Kim, Dong-Yeon Cho, Byoung-Tak Zhang |
| 2007 | Finding Clusters of Positive and Negative Coregulated Genes in Gene Expression Data. Kerstin Koch, Stefan Schönauer, Ivy Jansen, Jan Van den Bussche, Tomasz Burzykowski |
| 2007 | Fractal Dimension of Mie Scattering Spectra for the Appraisal of Infected HeLa Cells in Cultures. Radu Dobrescu, Loretta Ichim |
| 2007 | Functional and Molecular Imaging: Key Components of Personalized Healthcare. Steven Seltzer |
| 2007 | G-protein Coupled Receptor Subfamilies Prediction Based on Nearest Neighbor Approach. Mudassir Fayyaz, Adnan Mujahid, Asifullah Khan, Tae-Sun Choi, Nadeem Iqbal |
| 2007 | GPX: A Tool for the Exploration and Visualization of Genome Evolution. Neha Nahar, Lutz Hamel, Maria S. Poptsova, J. Peter Gogarten |
| 2007 | Gene Selection via Matrix Factorization. Fei Wang, Tao Li |
| 2007 | Gene expression profiling and machine learning to understand and predict primary graft dysfunction. Monika Ray, Sekhar Dharmarajan, Johannes Freudenberg, G. Alexander Patterson, Weixiong Zhang |
| 2007 | Gene-Markers Representation for Microarray Data Integration. Elena Baralis, Elisa Ficarra, Alessandro Fiori, Enrico Macii |
| 2007 | Generating social networks of intimate contacts for the study of public health intervention strategies. Courtney D. Corley, Lindsey Brown, Armin R. Mikler, Diane J. Cook, Karan P. Singh |
| 2007 | Graph Mining of Networks from Genome Biology. George Chin Jr., Grant C. Nakamura, Daniel G. Chavarría-Miranda, Heidi J. Sofia |
| 2007 | Graph Theory Application in Cell Nuleus Segmentation, Tracking and Identification. Lelin Zhang, Hongkai Xiong, Kai Zhang, Xiaobo Zhou |
| 2007 | Graph and Topological Structure Mining on Scientific Articles. Fan Wang, Ruoming Jin, Gagan Agrawal, Helen Piontkivska |
| 2007 | HAMMER Algorithm: Hashing with Arithmetic Modulo-4 for Motif Extraction of Regulatory Elements. Huitao Sheng, Kishan Mehrotra, Chilukuri K. Mohan, Ramesh Raina |
| 2007 | HICCUP: Hierarchical Clustering Based Value Imputation using Heterogeneous Gene Expression Microarray Datasets. Qiankun Zhao, Prasenjit Mitra, Dongwon Lee, Jaewoo Kang |
| 2007 | Histogram Transformation for Inter-Modality Image Registration. Jörg Meyer |
| 2007 | Homomorphisms of Multisource Trees into Networks with Applications to Metabolic Pathways. Qiong Cheng, Robert W. Harrison, Alexander Zelikovsky |
| 2007 | Hot and Cold: Spatial Fluctuation in HIV-1 Recombination Rates. Misha L. Rajaram, Vladimir N. Minin, Marc A. Suchard, Karin S. Dorman |
| 2007 | I/O Induced Scalability Limits of Bioinformatics Applications. Robert Henschel, Matthias S. Müller |
| 2007 | Identification of Conserved Domain Combinations in S.cerevisiae Proteins. Suk Hoon Jung, Hee-Young Hur, Desok Kim, Dong-Soo Han |
| 2007 | Identification of Differential Flow Cytometry Expression. Elizabeth Rossin, Saumyadipta Pyne, Florian Hahne, Philip L. De Jager |
| 2007 | Identifying Fungal Regulatory Motif Patterns Using SCOPE, an Ensemble Learning Method Motif Finder. Viktor Martyanov, Larkin Elderon, Amy Gladfelter, Dhanalakshmi R. Nair, Robert H. Gross |
| 2007 | Identifying Genomic Regulators of Set-Wise Co-Expression. Jung Hoon Woo, Tian Zheng, Ju Han Kim |
| 2007 | Improved edge map of geometrical active contour model based on coupling to anisotropic diffusion filtering. Foued Derraz, Abdelmalik Taleb-Ahmed, Azeddine Chikh, Fethi Bereksi-Reguig |
| 2007 | Inference of Gene Regulatory Networks Using Time Sliding Comparison and Transcriptional Lagging Time from Time Series Gene Expression Profiles. Sheehyun Kim, Dongsup Kim |
| 2007 | Inferring Behavioral-level Circuits of Caenorhabditis elegans from the Topology of its Wiring Diagram. Yunkyu Sohn, Jaeseung Jeong |
| 2007 | Integrate Qualitative Biological Knowledge to Build Gene Networks by Parallel Dynamic Bayesian Network Structure Learning. Song Li |
| 2007 | Integrative Biomedical Informatics. Brian D. Athey |
| 2007 | Intelligent Interfaces for Mining Large-Scale RNAi-HCS Image Databases. Chen Lin, Wayne Mak, Pengyu Hong, Katharine J. Sepp, Norbert Perrimon |
| 2007 | Intrinsically Disordered Proteins in Human Diseases. Vladimir N. Uversky, Christopher J. Oldfield, A. Keith Dunker |
| 2007 | Intrinsically Disordered Proteins: An Update. A. Keith Dunker, Christopher J. Oldfield, Jingwei Meng, Pedro Romero, Jack Y. Yang, Zoran Obradovic, Vladimir N. Uversky |
| 2007 | Intrinsically Disordered Proteins: Predictions and Applications. A. Keith Dunker, Christopher J. Oldfield, Jingwei Meng, Pedro Romero, Jack Y. Yang, Zoran Obradovic, Vladimir N. Uversky |
| 2007 | Iterative Refinement of Repeat Sequence Specification Using Constrained Pattern Matching. Dan He, Abdullah N. Arslan, Yu He, Xindong Wu |
| 2007 | Knowledge Modeling for High Content Screening of Multimedia Biological Data. Arif Ghafoor, J. Paul Robinson |
| 2007 | Large-Scale QM/MM Calculations of Electronic Excitations in Yellow Protein: Toward Petascale Level of Protein Calculations. Marek Freindorf, Matthew D. Jones, Yihan Shao, Jing Kong, Thomas R. Furlani |
| 2007 | Large-scale Discovery of Regulatory Motifs Involved in Alternative Splicing. Sihui Zhao, Jihye Kim, Steffen Heber |
| 2007 | Lecture on Progress toward Petascale Applications in Bioinformatics and Computational Biology. Craig A. Stewart, Malinda Lingwall, David A. Bader |
| 2007 | Linking Protein Mass with Function via Organismal Massome Networks. Gil Alterovitz, Eugenia Lyashenko, Michael Xiang, Marco Ramoni |
| 2007 | MS Lesions Detection in MRI Using Grouping Artificial Immune Networks. Akmal A. Younis, Ahmed T. Soliman, Mansur R. Kabuka, Nigel M. John |
| 2007 | Mathematical Models and Optimization Discussion on EA System on AIDS/HIV Spread Estimating and Countermeasures Evaluating. Siyuan Liu, Chao Liu, Chunzhe Zhao, Yu Liu |
| 2007 | Medical Image Retrieval Based on Bidimensional Empirical Mode Decomposition. Wei Liu, Weidong Xu, Lihua Li |
| 2007 | Metallobiochemistry of Alzheimer's Disease and Its Theranostic Agent Development. Xudong Huang |
| 2007 | Methodology for Evaluating DNA Pattern Searching Algorithms on Multiprocessor. Benfano Soewito, Ning Weng |
| 2007 | Metropolis-Hastings Algorithm and Continuous Regression for finding Next-State Models of Protein Modification using Information Scores. David J. John, Jacquelyn S. Fetrow, James L. Norris |
| 2007 | Microtubule Dynamics Classification Using a Statistical Model of the Movement of Outer Tips. Christopher Alberti, Jean-Philippe Villaréal, Delano Billingsley, Koon Yin Kong, Adam I. Marcus, Paraskevi Giannakakou, May D. Wang |
| 2007 | Middleware based Inpatient Healthcare Information System. Sung-Huai Hsieh, Sheau-Ling Hsieh, Yung-Ching Weng, Tzu-Hsiang Yang, Feipei Lai, Po-Hsun Cheng, Xiao-Ou Ping, Mao-yu Jan, Jen-Chiun Lin, Chin-Hung Peng, K. H. Huang, L. F. Ko, Chi-Huang Chen, Kai-Ping Hsu |
| 2007 | Mining Conserved Structures of Enzymes from Functional Hierarchical Classification. Yu-Feng Huang, Yu-Shin Lin, Tian-Wei Hsu, Chien-Kang Huang |
| 2007 | Mining Frequent Contiguous Sequence Patterns in Biological Sequences. Tae Ho Kang, Jae Soo Yoo, Hak Yong Kim |
| 2007 | Mining Order Preserving Patterns in Microarray Data by Finding Frequent Orders. Li Teng, Laiwan Chan |
| 2007 | Modeling protein interaction network and mechanisms in exocytosis. Wen Zhou, Tian Xia, Jiansong Tong, Julie A. Dickerson, Bo Su, Xun Gu |
| 2007 | Morphometric Analysis of Hippocampal Shape in Mild Cognitive Impairment: An Imaging Genetics Study. Li Shen, Andrew J. Saykin, Moo K. Chung, Heng Huang |
| 2007 | MotifNetwork: A Grid-enabled Workflow for High-throughput Domain Analysis of Biological Sequences: Implications for annotation and study of phylogeny, protein interactions, and intraspecies variation. Jeffrey L. Tilson, Gloria Rendon, Mao-Feng Ger, Eric Jakobsson |
| 2007 | MotifNetwork: Genome-Wide Domain Analysis using Grid-enabled Workflows. Jeffrey L. Tilson, Alan Blatecky, Gloria Rendon, Mao-Feng Ger, Eric Jakobsson |
| 2007 | Multiclass Fuzzy Clustering Support Vector Machines for Protein Local Structure Prediction. Wei Zhong, Jieyue He, Yi Pan |
| 2007 | Multivariate Analysis of Imaging Mass Spectrometry Data. E. R. Muir, I. J. Ndiour, N. A. LeGoasduff, Richard A. Moffitt, Ying Liu, M. Cameron Sullards, Alfred H. Merrill, Yanfeng Chen, May D. Wang |
| 2007 | Multivariate Feature Selection using Random Subspace Classifiers for Gene Expression Data. Vidya P. Kamath, Lawrence O. Hall, Timothy Yeatman, Steven Eschrich |
| 2007 | Mutual Information based Minimum Spanning Trees Model for Selecting Discriminative Genes. Fang Zhou, Jieyue He, Wei Zhong |
| 2007 | Nanobioinformatics: The Enabling Technology of Personalized Medicine. Linda K. Molnar |
| 2007 | Non-Monotonic Radio-Sensitivity over Tumor Volumes on Adjuvant Radio Therapy A New Insight on Cell Killing and Modeling. Jack Y. Yang, Andrzej Niemierko, Mary Qu Yang, Youping Deng |
| 2007 | Non-negative Tensor Factorization Based on Alternating Large-scale Non-negativity-constrained Least Squares. Hyunsoo Kim, Haesun Park, Lars Eldén |
| 2007 | Novel Materials for the Direct Removal of Water and Ions from the Body for Patients with Dialysis Needs. Lisa Furby, Ravinder Gupta, Ajay Mahajan, Jarlen Don, Tsuchin Chu, Bakul Dave, Brad Schwartz |
| 2007 | On the Design of Oligos for Gene Synthesis. Chris Thachuk, Anne Condon |
| 2007 | On the Effectiveness of Constraints Sets in Clustering Genes. Erliang Zeng, Chengyong Yang, Tao Li, Giri Narasimhan |
| 2007 | Optimizing Flow-based Modularization by Iterative Centroid Search in Protein Interaction Networks. Young-Rae Cho, Woochang Hwang, Aidong Zhang |
| 2007 | PANP - a New Method of Gene Detection on Oligonucleotide Expression Arrays. Peter Warren, Deanne M. Taylor, Paolo G. V. Martini, Jennifer Jackson, Jadwiga R. Bienkowska |
| 2007 | PID Control based on BP Neural Network for the Regulation of Blood Glucose Level in Diabetes. Chengwei Li, Ruiqiang Hu |
| 2007 | Partial Least Squares Based Dimension Reduction with Gene Selection for Tumor Classification. Guo-Zheng Li, Xue-Qiang Zeng, Jack Y. Yang, Mary Qu Yang |
| 2007 | Partial Mixture Model for Tight Clustering in Exploratory Gene Expression Analysis. Yinyin Yuan, Chang-Tsun Li |
| 2007 | Partial transmission high-speed continuous tracking multi-leaf collimator for 4D adaptive radiation therapy. Tarun Kanti Podder, Ivan Buzurovic, Yida Hu, James M. Galvin, Yan Yu |
| 2007 | Pathway Complements of Four Yersinia. Jennifer L. Neary, Maribel Sanchez, Yufeng Wang, Timothy G. Lilburn |
| 2007 | Pattern Cores And Connectedness in Cancer Gene Expression. Noha A. Yousri, Mohamed S. Kamel, Mohamed A. Ismail |
| 2007 | Performance Characterization of BLAST for the Grid. Enis Afgan, Purushotham V. Bangalore |
| 2007 | Performance Evaluation of a Scalable Molecular Dynamics Simulation Framework on a Massively-Parallel System. Sadaf R. Alam, Pratul K. Agarwal, Jeffery A. Kuehn |
| 2007 | Phagocyte Transmigration Modeling Using System Dynamic Controls. Jiaxing Xue, Jean Gao, Liping Tang |
| 2007 | Phylogeny By Top Down Clustering Using a Given Multiple Alignment. Abdullah N. Arslan, Peyman Bizargity |
| 2007 | Predicting Protein Subcelluar Localizations Using Weighted Euclidian Distance. Jing Hu, Changhui Yan |
| 2007 | Predicting Protein-Protein Interaction Based on Fisher Scores Extracted from Domain Profiles. Tapan Patel, Li Liao |
| 2007 | Prediction of Histone Modifications in DNA sequences. Tho Hoan Pham, Tu Bao Ho, Dang Hung Tran, Kenji Satou |
| 2007 | Probability Analysis on Associations of Adverse Drug Events with Drug-Drug Interactions. Yu-Ting Huang, Shih-Fang Lin, Chung-Cheng Chiu, Hsiang-Yuan Yeh, Von-Wun Soo |
| 2007 | Proceedings of the 7th IEEE International Conference on Bioinformatics and Bioengineering, BIBE 2007, October 14-17, 2007, Harvard Medical School, Boston, MA, USA |
| 2007 | Profilins, Formins and Katanins as Flagellar Proteins of Leishmania spp.: a Genome-based, Multi-step Bioinformatics-driven Description. Elton José R. Vasconcelos, Ana Carolina L. Pacheco, Joao J. S. Gouveia, Fabiana F. Araújo, Michely C. Diniz, Michel T. Kamimura, Marcilia P. Costa, Rodrigo Maggioni, Raimundo Araujo-Filho, Raimundo B. Costa, Diana Magalhaes de Oliveira |
| 2007 | Promoter studies in the human genome: one perspective on an unfinished story. Mary Qu Yang, Laura Elnitski |
| 2007 | Protein Secondary Structure Prediction Using Genetic Neural Support Vector Machines. Anjum Reyaz-Ahmed, Yan-Qing Zhang |
| 2007 | Protein Structure Prediction and Its Understanding Based on Machine Learning Methods. Yi Pan |
| 2007 | Protein function prediction from interaction networks using a random walk ranking algorithm. Valerio Freschi |
| 2007 | QOMA2: Optimizing the alignment of many sequences. Xu Zhang, Tamer Kahveci |
| 2007 | Quality Assessment of Affymetrix GeneChip Data using the EM Algorithm and a Naive Bayes Classifier. Brian E. Howard, Beate Sick, Imara Perera, Yang Ju Im, Heike Winter-Sederoff, Steffen Heber |
| 2007 | Quantitative Analysis of Inter-object Spatial Relationships in Biological Images. Wamiq Manzoor Ahmed, Magdalena Jonczyk, Ali Shamsaie, Arif Ghafoor, J. Paul Robinson |
| 2007 | Quantitative and Probabilistic Modeling in Pathway Logic. Alessandro Abate, Yu Bai, Nathalie Sznajder, Carolyn L. Talcott, Ashish Tiwari |
| 2007 | Rapid Detection and Classification of Bacterial Contamination Using Grid Computing. Wamiq Manzoor Ahmed, Bulent Bayraktar, Arun K. Bhunia, E. Daniel Hirleman, J. Paul Robinson, Bartek Rajwa |
| 2007 | Rat Mammary Fat Pad Segmentation and Growth Rate Evaluation in T1 Weighted MR Images. Bin Wang, Jianhua Xuan, Matthew T. Freedman, Peter G. Shields, Yue Joseph Wang |
| 2007 | Reconstructing Mutational Pathways from Serial Evolutionary Trees. Patricia Buendia |
| 2007 | Reconstructing Signal Transduction from Raw Genomic Data. Igor B. Zhulin |
| 2007 | Reducing Folding Scenario Candidates in Pseudoknots Detection Using PLMM_DPSS Algorithm Integrated With Energy Filters. Xiaolu Huang, Hesham H. Ali |
| 2007 | Resolving Scientific Service Interoperability With Schema Mapping. Nadia Yacoubi Ayadi, Zoé Lacroix |
| 2007 | Retrieval Analysis of a Cementless Modular Total Hip Arthroplasty Prosthesis. Manish Paliwal, D. Gordon Allan, Peter Filip |
| 2007 | Review of Systems Biology Simulation Tools for Translational Research. Melissa Freedenberg, Chanchala Kaddi, Chang F. Quo, May D. Wang |
| 2007 | Rough Overlapping Biclustering of Gene Expression Data. Ruizhi Wang, Duoqian Miao, Gang Li, Hongyun Zhang |
| 2007 | SBLAST: Structural Basic Local Alignment Searching Tools using Geometric Hashing. Tom Milledge, Gaolin Zheng, Tim Mullins, Giri Narasimhan |
| 2007 | SIGN: reliable protein interaction identification by integrating the Similarity In GO and the similarity in protein interaction Networks. Woochang Hwang, Taehyong Kim, Young-Rae Cho, Aidong Zhang, Murali Ramanathan |
| 2007 | SNPMiner: A Domain-Specific Deep Web Mining Tool. Fan Wang, Gagan Agrawal, Ruoming Jin, Helen Piontkivska |
| 2007 | Self-Optimizing Parallel Algorithms for Haplotype Reconstruction and Their Evaluation on the JPT and CHB Genotype Data. Dragos Trinca, Sanguthevar Rajasekaran |
| 2007 | Semiparametric RMA Background-Correction for Oligonucleotide Arrays. Ionut Bebu, Françoise Seillier-Moiseiwitsch, Hongfang Liu |
| 2007 | Sensitivity Analysis of Biomolecular Simulations using Symbolic Models. Sadaf R. Alam, Nikhil Bhatia, Jeffrey S. Vetter |
| 2007 | Sensitivity and Consistency of Affymetrix GeneChip Normalization Methods. Jared Fox, Nik Brown |
| 2007 | Shortest Path Approaches for the Longest Common Subsequence of a Set of Strings. Marina Barsky, Ulrike Stege, Alex Thomo, Chris Upton |
| 2007 | Signal Representation and Processing of Nucleotide Sequences. Paul Dan Cristea, Rodica Tuduce, Iulian Nastac, Jan Cornelis, Rudi Deklerck, Marius Andrei |
| 2007 | Silent Killing: an Object-Oriented View of Hypertension and Kidney Failures Part I. Jacqueline Signorini, Patrick Greussay |
| 2007 | Simulation and Visualization of Menisci-Femur Contact Using Patient-Specific Deformable Models. Ying Zhu |
| 2007 | SiteSeeker - A Motif Discovery Tool. Klaus H. Ecker, Lonnie R. Welch, Dazhang Gu |
| 2007 | Spatiotemporal Analysis of an Agent-Based Model of a Colony of Keratinocytes: A First Approach for the Development of Validation Methods. César Pichardo-Almarza, Rod H. Smallwood, S. A. Billings |
| 2007 | Speeding Up Pairwise Sequence Alignments: A Scoring Scheme Reweighting Based Approach. Yong Gao, Michael Henderson |
| 2007 | Statistial Analysis of nucleosome occupancy and histone modification data. Guo-Cheng Yuan, Jun S. Liu |
| 2007 | Statistical Shape Analysis of the Corpus Callosum in Subtypes of Autism. Qing He, Ye Duan, Judith H. Miles, Nicole Takahashi |
| 2007 | Stochastic Simulation Model for Patterned Neural Multi-Electrode Arrays. Dong-Soo Kahng, Yoonkey Nam, Doheon Lee |
| 2007 | Stochasticity and Networks in Genomic Data. John Quackenbush |
| 2007 | Storing Efficiently Bioinformatics Workflows. Michel A. Kinsy, Zoé Lacroix |
| 2007 | Structural Prediction of Protein-Protein Interactions in Saccharomyces cerevisiae. Martin S. R. Paradesi, Doina Caragea, William H. Hsu |
| 2007 | Studying Co-Regulation and Inter-Regulation of Genes via eQTL Mapping. Tian Zheng |
| 2007 | Super Granular Shrink-SVM Feature Elimination (Super GS-SVM-FE) Model for Protein Sequence Motif Information Extraction. Bernard Chen, Stephen Pellicer, Phang C. Tai, Robert W. Harrison, Yi Pan |
| 2007 | Supervised HITS Algorithm for MEDLINE Citation Ranking. Ying Liu, Yongjing Lin |
| 2007 | Supervised Statistical and Machine Learning Approaches to Inferring Pairwise and Module-Based Protein Interaction Networks. Fiona Browne, Haiying Wang, Huiru Zheng, Francisco Azuaje |
| 2007 | Support Vector Regression with Feature Selection for the Multivariate Calibration of Spectrofluorimetric Determination of Aromatic Amino Acids. Guo-Zheng Li, Hao-Hua Meng, Mary Qu Yang, Jack Y. Yang |
| 2007 | The GPU on biomedical image processing for color and phenotype analysis. Antonio Ruiz, Manuel Ujaldon, Jose Antonio Andrades, Jose Becerra, Kun Huang, Tony Pan, Joel H. Saltz |
| 2007 | The RNA String Kernel for siRNA Efficacy Prediction. Shibin Qiu, Terran Lane |
| 2007 | Tissue Identification in Ultrasound Images using Rayleigh Local Parameter Estimation. Santiago Aja-Fernández, Marcos Martín-Fernández, Carlos Alberola-López |
| 2007 | To fuse or not to fuse. Kishore R. Sakharkar, Meena K. Sakharkar |
| 2007 | Toward Petascale Simulation of Cellular Microphysiology. Scott B. Baden, Terrence J. Sejnowski, Thomas M. Bartol, Joel R. Stiles |
| 2007 | Toward The Recognition Code Of Protein-DNA Recognition. Juan Shan, Yuxuan Wang, Changhui Yan |
| 2007 | Toward a Nanobioinformatics Infrastructure for Nanotechnology-based Prostate Cancer Therapeutic Response Tracking. David S. Paik |
| 2007 | Toward a Realistic Model for Gene Network Evolution. Wenhai Chen, Tianzi Jiang, Tian Xia, Xun Gu |
| 2007 | Towards Construction of Optimal Strip-Exchanging Moves. Swapnoneel Roy, Ashok Kumar Thakur |
| 2007 | Trabecular Metal Patella Implanted into Soft-Tissue in a Post-Patellectomized Knee A Case Report. D. Gordon Allan, Manish Paliwal, Peter Filip |
| 2007 | Tracing Lineage in Multi-version Scientific Databases. Mingwu Zhang, Daisuke Kihara, Sunil Prabhakar |
| 2007 | Transforming Medicine: Genomics, Bioinformatics, and Human Health. Andreas D. Baxevanis |
| 2007 | Using Domain-Based Structural Ensemble to Improve Structure Modeling. Fa Zhang, Zhaoyun Ma, Zhiyong Liu, Bo Yuan |
| 2007 | Using Parsimony to Guide Maximum Likelihood Searches. Kenneth Sundberg, Timothy O'Connor, Hyrum Carroll, Mark J. Clement, Quinn Snell |
| 2007 | Using The Soybean Genome Database (SoyGD) To Display and Analyze a 1 Gbp Genome Sequence. David A. Lightfoot, Mengxia Michelle Zhu |
| 2007 | Using long fragments to reconstruct RNA backbones. Tapani Utriainen, Graham J. L. Kemp |
| 2007 | XML Encoding of Features Describing Rule-Based Modeling of Reaction Networks with Multi-Component Molecular Complexes. Michael L. Blinov, Ion I. Moraru |
| 2007 | Yin Yang Mental Squares - An Equilibrium-Based System For Bipolar Neurobiological Pattern Classification and Analysis. Wen-Ran Zhang, Karl E. Peace |
| 2007 | aCORR: A novel algorithm for clustering gene expression data. Hossam S. Sharara, Mohamed A. Ismail |
| 2007 | rSWTi: A Robust Stationary Wavelet Denoising Method for Array CGH Data. Yuhang Wang, Siling Wang, Andrew R. Zinn |