| 2003 | 2nd IEEE International Symposium on Bioinformatics and Bioengineering, Bethesda, Maryland, USA, November 4-5, 2001, Proceedings Nikolaos G. Bourbakis |
| 2001 | A Fast Pruning Algorithm for Optimal Sequence Alignment. Aaron Davidson |
| 2001 | An Algebra for Semantic Interoperability of Information Sources. Prasenjit Mitra, Gio Wiederhold |
| 2001 | An Automated Approach to Modeling Class II MHC Alleles and Predicting Peptide Binding. Martin T. Swain, Anthony J. Brooks, Graham J. L. Kemp |
| 2001 | An Intelligent Assistant for Navigation of Visually Impaired People (short paper). Nikolaos G. Bourbakis, Despina Kavraki |
| 2001 | An XML Application For Genomic Data Interoperation. Kei-Hoi Cheung, Yang Liu, Anuj Kumar, Michael Snyder, Mark Gerstein, Perry L. Miller |
| 2001 | Applying Data Warehousing Concepts to Gene Expression Data Management. Victor M. Markowitz, Thodoros Topaloglou |
| 2001 | Audio and Vision-Based Evaluation of Parkinson's Disease from Discourse Video. Francis K. H. Quek, Robert K. Bryll, Mary P. Harper, Lei Chen, Lorraine O. Ramig |
| 2001 | Chemosensory Adaptation in an Electronic Nose. Ricardo Gutierrez-Osuna, Nilesh U. Powar, P. Sun |
| 2001 | Comparing Algorithms for Large-Scale Sequence Analysis. Hadon Nash, Douglas Blair, John J. Grefenstette |
| 2001 | Comparing Trees in a Phylogenetic Relationship Repository. John Bluis, Ravi Nori, Hsin-Wei Wang, Pinglei Zhou, J. Peter Gogarten, Dong-Guk Shin |
| 2001 | Development of a Robotic Device for MRI-Guided Interventions in the Breast. Nikolaos V. Tsekos, John Shudy, Essa Yacoub, Panagiotis V. Tsekos, Ioannis G. Koutlas |
| 2001 | Discovering Common Structural Motifs from SSU 16 S Ribosomal RNA Secondary Structures. Hsien-Da Huang, Shu-Fen Fang, Jorng-Tzong Horng, Cheng-Yan Kao |
| 2001 | GIMS - A Data Warehouse for Storage and Analysis of Genome Sequence and Functional Data. Mike Cornell, Norman W. Paton, Shengli Wu, Carole A. Goble, Crispin J. Miller, Paul Kirby, Karen Eilbeck, Andy Brass, Andrew Hayes, Stephen G. Oliver |
| 2001 | Gene Classification using Expression Profiles: A Feasibility Study. Michihiro Kuramochi, George Karypis |
| 2001 | Integrating Co-Regulated Gene Groups and Pair-Wise Genome Comparisons to Automate Reconstruction of Microbial Pathways. Arvind K. Bansal |
| 2001 | Interrelated Two-way Clustering: An Unsupervised Approach for Gene Expression Data Analysis. Chun Tang, Li Zhang, Aidong Zhang, Murali Ramanathan |
| 2001 | Investigation of Ultrasound Image Based Correction of Intraoperative Brain Shift. Lisa M. Bates, Richard A. Robb |
| 2001 | Knowledge Discovery in Biological Databasets Using a Hybrid Bayes Classifier/Evolutionary Algorithm. Michael L. Raymer, Leslie A. Kuhn, William F. Punch III |
| 2001 | Medical Applications of Radiation Micro-Force (Invited Presentation). Mostafa Fatemi, James F. Greenleaf |
| 2001 | Medical Decision-Making and Collaborative Reasoning. José Quintero, Antonio Aguilera, Maryvonne Abraham, Hyxia Villegas, Guillermo Montilla, Basel Solaiman |
| 2001 | Mining Genome Variation to Associate Disease with Transcription Factor Binding Site Alteration. Julia V. Ponomarenko, Tatyana I. Merkulova, Galina Orlova, Elena Gorshkova, Oleg N. Fokin, Mikhail P. Ponomarenko |
| 2001 | Model-Based Prediction of the 3D Trajectory of Huge DNA Sequences Interactive Visualization and Exploration. Joan Hérisson, Rachid Gherbi |
| 2001 | Optimized Seamless Integration of Biomolecular Data. Barbara A. Eckman, Zoé Lacroix, Louiqa Raschid |
| 2001 | PRECIS: An Automated Pipeline for Producing Concise Reports About Proteins. Phillip W. Lord, Jacqueline Renée Reich, Alex L. Mitchell, Robert D. Stevens, Terri K. Attwood, Carole A. Goble |
| 2001 | PSST... The Probabilisitic Sequence Search Tool. Crispin J. Miller, Terri K. Attwood |
| 2001 | PocketMol: A Molecular Visualization Tool for the PocketPC (short paper). Jason R. Gilder, Michael L. Raymer, Travis E. Doom |
| 2001 | Predicting RNA Secondary Structures with Arbitrary Pseudoknots by Maximizing the Number of Stacking Pairs. Samuel Ieong, Ming-Yang Kao, Tak Wah Lam, Wing-Kin Sung, Siu-Ming Yiu |
| 2001 | Profile Combinatorics for Fragment Selection in Comparative Protein Structure Modeling. Deacon J. Sweeney, Gerald M. Alter, Michael L. Raymer, Travis E. Doom |
| 2001 | Querying Phylogenies Visually. Hasan M. Jamil, Giovanni A. Modica, Maria A. Teran |
| 2001 | Registration of Multi-Modal Brain Images Using the Rigidity Constraint. Lijin Ding, A. Ardeshir Goshtasby |
| 2001 | Searching Online Journals for Fluorescence Microscope Images Depicting Protein Subcellular Location Patterns. Robert F. Murphy, Meel Velliste, Jie Yao, Gregory Porreca |
| 2001 | Supporting Remote User Defined Functions in Heterogeneous Biological Databases. Liangyou Chen, Hasan M. Jamil |
| 2001 | TRUFFLER: Programs to Study Microbial Community Composition and Flux from Fluorescent DNA Fingerprinting Data. Michael J. Wise, A. Mark Osborn |
| 2001 | Texture-Based 3-D Brain Imaging. Sagar Saladi, Pujita Pinnamaneni, Joerg Meyer |
| 2001 | Thinking Nonlinearly About Brain Dynamics: A neurocomentary. Michale E. Brandt |
| 2001 | Utilizing Multiple Bioinformatics Information Sources: An XML Database Approach. Raymond K. Wong, William M. Shui |