Zsuzsanna Dosztányi

34 papers Journal 33Unranked 1
YearRankTypeTitle / Venue / Authors
2024 J jnl
ViralPrimer: a web server to monitor viral nucleic acid amplification tests' primer efficiency during pandemics, with emphasis on SARS-CoV-2 and Mpox.
Bioinform.
Norbert Deutsch, Zsuzsanna Dosztányi, István Csabai, Anna Medgyes-Horváth, Orsolya Pipek, József Stéger, Krisztián Papp, Dávid Visontai, Gábor Erdös, Anikó Mentes
2023 J jnl
CAID prediction portal: a comprehensive service for predicting intrinsic disorder and binding regions in proteins.
Nucleic Acids Res.
Alessio Del Conte, Adel Bouhraoua, Mahta Mehdiabadi, Damiano Clementel, Alexander Miguel Monzon, Alex S. Holehouse, Daniel A. Griffith, Ryan J. Emenecker, Ashwini Patil, Ronesh Sharma, Tatsuhiko Tsunoda, Alok Sharma, Yi Jun Tang, Bin Liu, Claudio Mirabello, Björn Wallner, Burkhard Rost, Dagmar Ilzhöfer, Maria Littmann, Michael Heinzinger, Lea I M. Krautheimer, Michael Bernhofer, Liam J. McGuffin, Isabelle Callebaut, Tristan Bitard Feildel, Jian Liu, Jianlin Cheng, Zhiye Guo, Jinbo Xu, Sheng Wang, Nawar Malhis, Jörg Gsponer, Chol-Song Kim, Kun-Sop Han, Myong-Chol Ma, Lukasz A. Kurgan, Sina Ghadermarzi, Akila Katuwawala, Bi Zhao, Zhenling Peng, Zhonghua Wu, Gang Hu, Kui Wang, Md. Tamjidul Hoque, Md Wasi Ul Kabir, Michele Vendruscolo, Pietro Sormanni, Min Li, Fuhao Zhang, Pengzhen Jia, Yida Wang, Michail Yu. Lobanov, Oxana V. Galzitskaya, Wim F. Vranken, Adrián Díaz, Thomas Litfin, Yaoqi Zhou, Jack Hanson, Kuldip K. Paliwal, Zsuzsanna Dosztányi, Gábor Erdös, Silvio C. E. Tosatto, Damiano Piovesan
2022 J jnl
DisProt in 2022: improved quality and accessibility of protein intrinsic disorder annotation.
Nucleic Acids Res.
Federica Quaglia, Bálint Mészáros, Edoardo Salladini, András Hatos, Rita Pancsa, Lucía B. Chemes, Mátyás Pajkos, Tamas Lazar, Samuel Peña-Díaz, Jaime Santos, Veronika Ács, Nazanin Farahi, Erzsébet Fichó, Maria Cristina Aspromonte, Claudio Bassot, Anastasia Chasapi, Norman E. Davey, Radoslav Davidovic, Laszlo Dobson, Arne Elofsson, Gábor Erdös, Pascale Gaudet, Michelle G. Giglio, Juliana Glavina, Javier Iserte, Valentín Iglesias, Zsófia L. Kálmán, Matteo Lambrughi, Emanuela Leonardi, Sonia Longhi, Sandra Macedo-Ribeiro, Emiliano Maiani, Julia Marchetti, Cristina Marino Buslje, Attila Meszaros, Alexander Miguel Monzon, Giovanni Minervini, Suvarna Nadendla, Juliet F. Nilsson, Marián Novotný, Christos A. Ouzounis, Nicolas Palopoli, Elena Papaleo, Pedro J. Barbosa Pereira, Gabriele Pozzati, Vasilis J. Promponas, Jordi Pujols, Alma Carolina Sanchez Rocha, Martin Salas, Luciana Rodriguez Sawicki, Éva Schád, Aditi Shenoy, Tamás Szaniszló, Konstantinos D. Tsirigos, Nevena Veljkovic, Gustavo D. Parisi, Salvador Ventura, Zsuzsanna Dosztányi, Peter Tompa, Silvio C. E. Tosatto, Damiano Piovesan
2021 J jnl
IUPred3: prediction of protein disorder enhanced with unambiguous experimental annotation and visualization of evolutionary conservation.
Nucleic Acids Res.
Gábor Erdös, Mátyás Pajkos, Zsuzsanna Dosztányi
2021 J jnl
MobiDB-lite 3.0: fast consensus annotation of intrinsic disorder flavors in proteins.
Bioinform.
Marco Necci, Damiano Piovesan, Damiano Clementel, Zsuzsanna Dosztányi, Silvio C. E. Tosatto
2021 J jnl
MobiDB: intrinsically disordered proteins in 2021.
Nucleic Acids Res.
Damiano Piovesan, Marco Necci, Nahuel Escobedo, Alexander Miguel Monzon, András Hatos, Ivan Micetic, Federica Quaglia, Lisanna Paladin, Pathmanaban Ramasamy, Zsuzsanna Dosztányi, Wim F. Vranken, Norman E. Davey, Gustavo D. Parisi, Mónika Fuxreiter, Silvio C. E. Tosatto
2021 J jnl
The MemMoRF database for recognizing disordered protein regions interacting with cellular membranes.
Nucleic Acids Res.
Georgina Csizmadia, Gábor Erdös, Hedvig Tordai, Rita Padányi, Silvio C. E. Tosatto, Zsuzsanna Dosztányi, Tamás Hegedüs
2020 J jnl
DisProt: intrinsic protein disorder annotation in 2020.
Nucleic Acids Res.
András Hatos, Borbála Hajdu-Soltész, Alexander Miguel Monzon, Nicolas Palopoli, Lucía Álvarez, Burcu Aykaç Fas, Claudio Bassot, Guillermo I. Benítez, Martina Bevilacqua, Anastasia Chasapi, Lucía B. Chemes, Norman E. Davey, Radoslav Davidovic, A. Keith Dunker, Arne Elofsson, Julien Gobeill, Nicolás S. González Foutel, Govindarajan Sudha, Mainak Guharoy, Tamás Horváth, Valentin Iglesias, Andrey V. Kajava, Orsolya P. Kovács, John Lamb, Matteo Lambrughi, Tamas Lazar, Jeremy Y. Leclercq, Emanuela Leonardi, Sandra Macedo-Ribeiro, Mauricio Macossay-Castillo, Emiliano Maiani, José A. Manso, Cristina Marino Buslje, Elizabeth Martínez-Pérez, Bálint Mészáros, Ivan Micetic, Giovanni Minervini, Nikoletta Murvai, Marco Necci, Christos A. Ouzounis, Mátyás Pajkos, Lisanna Paladin, Rita Pancsa, Elena Papaleo, Gustavo D. Parisi, Emilie Pasche, Pedro J. Barbosa Pereira, Vasilis J. Promponas, Jordi Pujols, Federica Quaglia, Patrick Ruch, Marco Salvatore, Éva Schád, Beáta Szabó, Tamás Szaniszló, Stella Tamana, Ágnes Tantos, Nevena Veljkovic, Salvador Ventura, Wim F. Vranken, Zsuzsanna Dosztányi, Peter Tompa, Silvio C. E. Tosatto, Damiano Piovesan
2020 J jnl
Disentangling the complexity of low complexity proteins.
Briefings Bioinform.
Pablo Mier, Lisanna Paladin, Stella Tamana, Sophia Petrosian, Borbála Hajdu-Soltész, Annika Urbanek, Aleksandra Gruca, Dariusz Plewczynski, Marcin Grynberg, Pau Bernadó, Zoltán Gáspári, Christos A. Ouzounis, Vasilis J. Promponas, Andrey V. Kajava, John M. Hancock, Silvio C. E. Tosatto, Zsuzsanna Dosztányi, Miguel A. Andrade-Navarro
2020 J jnl
PhaSePro: the database of proteins driving liquid?liquid phase separation.
Nucleic Acids Res.
Bálint Mészáros, Gábor Erdös, Beáta Szabó, Éva Schád, Ágnes Tantos, Rawan Abukhairan, Tamás Horváth, Nikoletta Murvai, Orsolya P. Kovács, Márton Kovács, Silvio C. E. Tosatto, Peter Tompa, Zsuzsanna Dosztányi, Rita Pancsa
2020 J jnl
PlaToLoCo: the first web meta-server for visualization and annotation of low complexity regions in proteins.
Nucleic Acids Res.
Patryk Jarnot, Joanna Ziemska-Legiecka, Laszlo Dobson, Matthew Merski, Pablo Mier, Miguel A. Andrade-Navarro, John M. Hancock, Zsuzsanna Dosztányi, Lisanna Paladin, Marco Necci, Damiano Piovesan, Silvio C. E. Tosatto, Vasilis J. Promponas, Marcin Grynberg, Aleksandra Gruca
2018 J jnl
A comprehensive assessment of long intrinsic protein disorder from the DisProt database.
Bioinform.
Marco Necci, Damiano Piovesan, Zsuzsanna Dosztányi, Peter Tompa, Silvio C. E. Tosatto
2018 J jnl
DIBS: a repository of disordered binding sites mediating interactions with ordered proteins.
Bioinform.
Éva Schád, Erzsébet Fichó, Rita Pancsa, István Simon, Zsuzsanna Dosztányi, Bálint Mészáros
2018 J jnl
IUPred2A: context-dependent prediction of protein disorder as a function of redox state and protein binding.
Nucleic Acids Res.
Bálint Mészáros, Gábor Erdös, Zsuzsanna Dosztányi
2018 J jnl
MobiDB 3.0: more annotations for intrinsic disorder, conformational diversity and interactions in proteins.
Nucleic Acids Res.
Damiano Piovesan, Francesco Tabaro, Lisanna Paladin, Marco Necci, Ivan Micetic, Carlo Camilloni, Norman E. Davey, Zsuzsanna Dosztányi, Bálint Mészáros, Alexander Miguel Monzon, Gustavo D. Parisi, Éva Schád, Pietro Sormanni, Peter Tompa, Michele Vendruscolo, Wim F. Vranken, Silvio C. E. Tosatto
2017 J jnl
DisProt 7.0: a major update of the database of disordered proteins.
Nucleic Acids Res.
Damiano Piovesan, Francesco Tabaro, Ivan Micetic, Marco Necci, Federica Quaglia, Christopher J. Oldfield, Maria Cristina Aspromonte, Norman E. Davey, Radoslav Davidovic, Zsuzsanna Dosztányi, Arne Elofsson, Alessandra Gasparini, András Hatos, Andrey V. Kajava, Lajos Kalmár, Emanuela Leonardi, Tamas Lazar, Sandra Macedo-Ribeiro, Mauricio Macossay-Castillo, Attila Meszaros, Giovanni Minervini, Nikoletta Murvai, Jordi Pujols, Daniel B. Roche, Edoardo Salladini, Éva Schád, Antoine Schramm, Beáta Szabó, Ágnes Tantos, Fiorella Tonello, Konstantinos D. Tsirigos, Nevena Veljkovic, Salvador Ventura, Wim F. Vranken, Per Warholm, Vladimir N. Uversky, A. Keith Dunker, Sonia Longhi, Peter Tompa, Silvio C. E. Tosatto
2017 J jnl
InterPro in 2017 - beyond protein family and domain annotations.
Nucleic Acids Res.
Robert D. Finn, Teresa K. Attwood, Patricia C. Babbitt, Alex Bateman, Peer Bork, Alan J. Bridge, Hsin-Yu Chang, Zsuzsanna Dosztányi, Sara El-Gebali, Matthew Fraser, Julian Gough, David Haft, Gemma L. Holliday, Hongzhan Huang, Xiaosong Huang, Ivica Letunic, Rodrigo Lopez, Shennan Lu, Aron Marchler-Bauer, Huaiyu Mi, Jaina Mistry, Darren A. Natale, Marco Necci, Gift Nuka, Christine A. Orengo, Young Mi Park, Sebastien Pesseat, Damiano Piovesan, Simon C. Potter, Neil D. Rawlings, Nicole Redaschi, Lorna J. Richardson, Catherine Rivoire, Amaia Sangrador-Vegas, Christian J. A. Sigrist, Ian Sillitoe, Ben Smithers, Silvano Squizzato, Granger G. Sutton, Narmada Thanki, Paul D. Thomas, Silvio C. E. Tosatto, Cathy H. Wu, Ioannis Xenarios, Lai-Su L. Yeh, Siew-Yit Yong, Alex L. Mitchell
2017 J jnl
MobiDB-lite: fast and highly specific consensus prediction of intrinsic disorder in proteins.
Bioinform.
Marco Necci, Damiano Piovesan, Zsuzsanna Dosztányi, Silvio C. E. Tosatto
2017 J jnl
Novel linear motif filtering protocol reveals the role of the LC8 dynein light chain in the Hippo pathway.
PLoS Comput. Biol.
Gábor Erdös, Tamás Szaniszló, Mátyás Pajkos, Borbála Hajdu-Soltész, Bence Kiss, Gábor Pál, László Nyitray, Zsuzsanna Dosztányi
2014 — conf
Predicting functional sites in disordered proteins - implications in disease.
IWBBIO
Bálint Mészáros, István Simon, Zsuzsanna Dosztányi
2013 J jnl
D
Nucleic Acids Res.
Matt E. Oates, Pedro Romero, Takashi Ishida, Mohamed F. Ghalwash, Marcin J. Mizianty, Bin Xue, Zsuzsanna Dosztányi, Vladimir N. Uversky, Zoran Obradovic, Lukasz A. Kurgan, A. Keith Dunker, Julian Gough
2011 J jnl
Proteins with Complex Architecture as Potential Targets for Drug Design: A Case Study of
PLoS Comput. Biol.
Bálint Mészáros, Judit Tóth, Beáta G. Vértessy, Zsuzsanna Dosztányi, István Simon
2010 J jnl
Bioinformatical approaches to characterize intrinsically disordered/unstructured proteins.
Briefings Bioinform.
Zsuzsanna Dosztányi, Bálint Mészáros, István Simon
2009 J jnl
ANCHOR: web server for predicting protein binding regions in disordered proteins.
Bioinform.
Zsuzsanna Dosztányi, Bálint Mészáros, István Simon
2009 J jnl
Prediction of Protein Binding Regions in Disordered Proteins.
PLoS Comput. Biol.
Bálint Mészáros, István Simon, Zsuzsanna Dosztányi
2005 J jnl
IUPred: web server for the prediction of intrinsically unstructured regions of proteins based on estimated energy content.
Bioinform.
Zsuzsanna Dosztányi, Veronika Csizmok, Peter Tompa, István Simon
2005 J jnl
PDB_TM: selection and membrane localization of transmembrane proteins in the protein data bank.
Nucleic Acids Res.
Gábor E. Tusnády, Zsuzsanna Dosztányi, István Simon
2005 J jnl
TMDET: web server for detecting transmembrane regions of proteins by using their 3D coordinates.
Bioinform.
Gábor E. Tusnády, Zsuzsanna Dosztányi, István Simon
2004 J jnl
Noncovalent Cross-links in Context with Other Structural and Functional Elements of Proteins.
J. Chem. Inf. Model.
Éva Tüdos, András Fiser, Ágnes Simon, Zsuzsanna Dosztányi, Mónika Fuxreiter, Csaba Magyar, István Simon
2004 J jnl
Transmembrane proteins in the Protein Data Bank: identification and classification.
Bioinform.
Gábor E. Tusnády, Zsuzsanna Dosztányi, István Simon
2003 J jnl
SCide: Identification of Stabilization Centers in Proteins.
Bioinform.
Zsuzsanna Dosztányi, Csaba Magyar, Gábor E. Tusnády, István Simon
2003 J jnl
Servers for sequence-structure relationship analysis and prediction.
Nucleic Acids Res.
Zsuzsanna Dosztányi, Csaba Magyar, Gábor E. Tusnády, Miklós Cserzo, András Fiser, István Simon
2001 J jnl
Amino acid similarity matrices based on force fields.
Bioinform.
Zsuzsanna Dosztányi, Andrew Ernest Torda
1997 J jnl
The role of long-range interactions in defining the secondary structure of proteins is overestimated.
Comput. Appl. Biosci.
András Fiser, Zsuzsanna Dosztányi, István Simon