Zoya Dimitrova

19 papers Journal 8Unranked 11
YearRankTypeTitle / Venue / Authors
2022 J jnl
Primary case inference in viral outbreaks through analysis of intra-host variant population.
BMC Bioinform.
Walker Gussler, David S. Campo, Zoya Dimitrova, Pavel Skums, Yury Khudyakov
2018 J jnl
QUENTIN: reconstruction of disease transmissions from viral quasispecies genomic data.
Bioinform.
Pavel Skums, Alex Zelikovsky, Rahul Singh, Walker Gussler, Zoya Dimitrova, Sergey Knyazev, Igor Mandric, Sumathi Ramachandran, David S. Campo, Deeptanshu Jha, Leonid Bunimovich, Elizabeth Costenbader, Connie Sexton, Siobhán O'Connor, Guo-liang Xia, Yury Khudyakov
2015 — conf
Algorithms for prediction of viral transmission using analysis of intra-host viral populations.
ICCABS
Pavel Skums, Olga Glebova, David S. Campo, Nana Li, Zoya Dimitrova, Seth Sims, Leonid Bunimovich, Alex Zelikovsky, Yury Khudyakov
2015 J jnl
Computational framework for next-generation sequencing of heterogeneous viral populations using combinatorial pooling.
Bioinform.
Pavel Skums, Alexander Artyomenko, Olga Glebova, Sumathi Ramachandran, Ion I. Mandoiu, David S. Campo, Zoya Dimitrova, Alex Zelikovsky, Yuri Khudyakov
2014 — conf
Detection of genetic relatedness between viral samples using EM-based clustering of next-generation sequencing data.
ICCABS
Pavel Skums, Alexander Artyomenko, Olga Glebova, Alex Zelikovsky, David S. Campo, Zoya Dimitrova, Yuri Khudyakov
2014 — conf
New computational methods for assessing the genetic relatedness of close viral variants.
ICCABS
David S. Campo, Zoya Dimitrova, Guo-liang Xia, Pavel Skums, Lilia Ganova-Raeva, Yuri Khudyakov
2013 — conf
Alignment of DNA Mass-Spectral Profiles Using Network Flows.
ISBRA
Pavel Skums, Olga Glebova, Alex Zelikovsky, Zoya Dimitrova, David Stiven Campo Rendon, Lilia Ganova-Raeva, Yuri Khudyakov
2013 — conf
Computational analysis and modelling of intra-host adaptation of hepatitis C virus: The role of immune cross-reactivity of HCV quasispecies.
ICCABS
Pavel Skums, David S. Campo, Zoya Dimitrova, Leonid Bunimovich, Yuri Khudyakov
2013 — conf
Mutational robustness of hepatitis C virus intra-host variants.
ICCABS
David S. Campo, Zoya Dimitrova, Pavel Skums, Yuri Khudyakov
2012 J jnl
Coordinated evolution of the Hepatitis B Virus Polymerase.
Silico Biol.
David S. Campo, Zoya Dimitrova, James Lara, Mike Purdy, Hong Thai, Sumathi Ramachandran, Lilia Ganova-Raeva, X. Zhai, Joseph C. Forbi, Chong-Gee Teo, Yuri Khudyakov
2012 J jnl
Efficient error correction for next-generation sequencing of viral amplicons.
BMC Bioinform.
Pavel Skums, Zoya Dimitrova, David S. Campo, Gilberto Vaughan, Livia Rossi, Joseph C. Forbi, Jonny Yokosawa, Alex Zelikovsky, Yuri Khudyakov
2012 J jnl
Evaluation of viral heterogeneity using next-generation sequencing, end-point limiting-dilution and mass spectrometry.
Silico Biol.
Zoya Dimitrova, David S. Campo, Sumathi Ramachandran, Gilberto Vaughan, Lilia Ganova-Raeva, Yulin Lin, Joseph C. Forbi, Guo-liang Xia, Pavel Skums, Brian L. Pearlman, Yuri Khudyakov
2012 J jnl
Numerical detection, measuring and analysis of differential interferon resistance for individual HCV intra-host variants and its influence on the therapy response.
Silico Biol.
Pavel Skums, David S. Campo, Zoya Dimitrova, Gilberto Vaughan, Daryl T. Lau, Yuri Khudyakov
2011 — conf
Assessments of intra- and inter-host diversity of hepatitis C virus using Next Generation Sequencing and Mass spectrometry.
BIBM Workshops
Zoya Dimitrova, David S. Campo, Sumathi Ramachandran, Gilberto Vaughan, Lilia Ganova-Raeva, Yulin Lin, Joseph C. Forbi, Guo-liang Xia, Pavel Skums, Brian L. Pearlman, Yuri Khudyakov
2011 — conf
Modelling differential interferon resistance of HCV quasispecies.
BIBM Workshops
Pavel Skums, David S. Campo, Zoya Dimitrova, Gilberto Vaughan, Daryl T. Lau, Yuri Khudyakov
2011 — conf
Network of coordinated substitutions in the Hepatitis B virus polymerase.
BIBM Workshops
David S. Campo, Zoya Dimitrova, James Lara, Mike Purdy, Hong Thai, Sumathi Ramachandran, Lilia Ganova-Raeva, X. Zhai, Joseph C. Forbi, Chong-Gee Teo, Yuri Khudyakov
2008 J jnl
Artificial neural network for prediction of antigenic activity for a major conformational epitope in the hepatitis C virus NS3 protein.
Bioinform.
James Lara, Robert M. Wohlhueter, Zoya Dimitrova, Yuri Khudyakov
2008 — conf
Invited Keynote Talk: Integrative Viral Molecular Epidemiology: Hepatitis C Virus Modeling.
ISBRA
James Lara, Zoya Dimitrova, Yuri Khudyakov
2008 — conf
Physicochemical Correlation between Amino Acid Sites in Short Sequences under Selective Pressure.
ISBRA
David S. Campo, Zoya Dimitrova, Yuri Khudyakov