Zijing Liu

73 papers A* 5A 2B 2Misc 1Journal 52Unranked 11
YearRankTypeTitle / Venue / Authors
2026 J jnl
Agentic reinforcement learning empowers next-generation chemical language models for molecular design and synthesis.
CoRR
Hao Li, He Cao, Shenyao Peng, Zijing Liu, Bin Feng, Yu Wang, Zhiyuan Yan, Yonghong Tian, Yu Li, Li Yuan
2026 J jnl
Mozi: Governed Autonomy for Drug Discovery LLM Agents.
CoRR
He Cao, Siyu Liu, Fan Zhang, Zijing Liu, Hao Li, Bin Feng, Shengyuan Bai, Leqing Chen, Kai Xie, Yu Li
2026 J jnl
Phi-Former: A Pairwise Hierarchical Approach for Compound-Protein Interactions Prediction.
CoRR
Zhe Wang, Zijing Liu, Chencheng Xu, Yuan Yao
2025 J jnl
BioMD: All-atom Generative Model for Biomolecular Dynamics Simulation.
CoRR
Bin Feng, Jiying Zhang, Xinni Zhang, Zijing Liu, Yu Li
2025 J jnl
ChemLabs on ChemO: A Multi-Agent System for Multimodal Reasoning on IChO 2025.
CoRR
Qiang Xu, Shengyuan Bai, Leqing Chen, Zijing Liu, Yu Li
2025 Misc conf
ControlMol: Adding Substructure Control To Molecule Diffusion Models.
ICASSP
Zhengyang Qi, Zijing Liu, Jiying Zhang, He Cao, Xiaohua Xu, Yu Li
2025 — conf
Dynamic Guided and Domain Applicable Safeguards for Enhanced Security in Large Language Models.
NAACL (Findings)
Weidi Luo, He Cao, Zijing Liu, Yu Wang, Aidan Wong, Bin Feng, Yuan Yao, Yu Li
2025 J jnl
Enhanced Sampling, Public Dataset and Generative Model for Drug-Protein Dissociation Dynamics.
CoRR
Maodong Li, Jiying Zhang, Bin Feng, Wenqi Zeng, Dechin Chen, Zhijun Pan, Yu Li, Zijing Liu, Yi Isaac Yang
2025 J jnl
From Static Structures to Ensembles: Studying and Harnessing Protein Structure Tokenization.
CoRR
Zijing Liu, Bin Feng, He Cao, Yu Li
2025 J jnl
GPAS: Accelerating Convergence of LLM Pretraining via Gradient-Preserving Activation Scaling.
CoRR
Tianlong Chen, Xin Xu, Zijing Liu, Pengxiang Li, Xinyuan Song, Ajay Kumar Jaiswal, Fan Zhang, Jishan Hu, Yang Wang, Hao Chen, Shizhe Diao, Shiwei Liu, Yu Li, Yin Lu, Can Yang
2025 J jnl
Hierarchical affinity landscape navigation through learning a shared pocket-ligand space.
Patterns
Bin Feng, Zijing Liu, Hao Li, Mingjun Yang, Junjie Zou, He Cao, Yu Li, Lei Zhang, Sheng Wang
2025 J jnl
How to Detect and Defeat Molecular Mirage: A Metric-Driven Benchmark for Hallucination in LLM-based Molecular Comprehension.
CoRR
Hao Li, Liuzhenghao Lv, He Cao, Zijing Liu, Zhiyuan Yan, Yu Wang, Yonghong Tian, Yu Li, Li Yuan
2025 B conf
InstructMol: Multi-Modal Integration for Building a Versatile and Reliable Molecular Assistant in Drug Discovery.
COLING
He Cao, Zijing Liu, Xingyu Lu, Yuan Yao, Yu Li
2025 J jnl
Mapping the distribution of radial artery atherosclerosis by optical coherence tomography.
BMC Medical Imaging
Yuntao Wang, Rui Yan, Zixuan Li, Zijing Liu, Yujie Wang, Jiahui Song, Senhu Wang, Yongxia Wu, Haotian Wang, Jincheng Guo
2025 — conf
Parameter-Efficient Fine-Tuning via Circular Convolution.
ACL (Findings)
Aochuan Chen, Jiashun Cheng, Zijing Liu, Ziqi Gao, Fugee Tsung, Yu Li, Jia Li
2025 — conf
Phi-Former: A Pairwise Hierarchical Approach for Compound-Protein Interactions Prediction.
BIBM
Zhe Wang, Zijing Liu, Chencheng Xu, Yuan Yao
2025 A* conf
Rethinking Text-based Protein Understanding: Retrieval or LLM?
EMNLP
Juntong Wu, Zijing Liu, He Cao, Li Hao, Bin Feng, Zishan Shu, Ke Yu, Li Yuan, Yu Li
2025 J jnl
Rethinking Text-based Protein Understanding: Retrieval or LLM?
CoRR
Juntong Wu, Zijing Liu, He Cao, Hao Li, Bin Feng, Zishan Shu, Ke Yu, Li Yuan, Yu Li
2024 J jnl
CFViSA: A comprehensive and free platform for visualization and statistics in omics-data.
Comput. Biol. Medicine
Ningqi Wang, Yarong Li, Shuwen Han, Yaozhong Zhang, Jun Yang, Zheng Yin, Cong Deng, Zijing Liu, Yinhang Wu, Wei Wu, Wei Xue, Tianjie Yang, Yangchun Xu, Qirong Shen, Gaofei Jiang, Zhong Wei
2024 J jnl
ControlMol: Adding Substruture Control To Molecule Diffusion Models.
CoRR
Zhengyang Qi, Zijing Liu, Jiying Zhang, He Cao, Yu Li
2024 — conf
Efficient Antibody Structure Refinement Using Energy-Guided SE(3) Flow Matching.
BIBM
Jiying Zhang, Zijing Liu, Shengyuan Bai, He Cao, Yu Li, Lei Zhang
2024 J jnl
Efficient Antibody Structure Refinement Using Energy-Guided SE(3) Flow Matching.
CoRR
Jiying Zhang, Zijing Liu, Shengyuan Bai, He Cao, Yu Li, Lei Zhang
2024 J jnl
Guide for Defense (G4D): Dynamic Guidance for Robust and Balanced Defense in Large Language Models.
CoRR
He Cao, Weidi Luo, Yu Wang, Zijing Liu, Bing Feng, Yuan Yao, Yu Li
2024 — conf
ImmuFold: High-Accuracy Antibody Structure Prediction with Efficient Network.
BIBM
Shengyuan Bai, Zijing Liu, Jiying Zhang, Yu Li
2024 J jnl
Increasing irrigation-triggered landslide activity caused by intensive farming in deserts on three continents.
Int. J. Appl. Earth Obs. Geoinformation
Zijing Liu, Haijun Qiu, Yaru Zhu, Wenchao Huangfu, Bingfeng Ye, Yingdong Wei, Bingzhe Tang, Ulrich Kamp
2024 — conf
MoleculeQA: A Dataset to Evaluate Factual Accuracy in Molecular Comprehension.
EMNLP (Findings)
Xingyu Lu, He Cao, Zijing Liu, Shengyuan Bai, Leqing Chen, Yuan Yao, Hai-Tao Zheng, Yu Li
2024 J jnl
MoleculeQA: A Dataset to Evaluate Factual Accuracy in Molecular Comprehension.
CoRR
Xingyu Lu, He Cao, Zijing Liu, Shengyuan Bai, Leqing Chen, Yuan Yao, Hai-Tao Zheng, Yu Li
2024 — conf
PRESTO: Progressive Pretraining Enhances Synthetic Chemistry Outcomes.
EMNLP (Findings)
He Cao, Yanjun Shao, Zhiyuan Liu, Zijing Liu, Xiangru Tang, Yuan Yao, Yu Li
2024 J jnl
PRESTO: Progressive Pretraining Enhances Synthetic Chemistry Outcomes.
CoRR
He Cao, Yanjun Shao, Zhiyuan Liu, Zijing Liu, Xiangru Tang, Yuan Yao, Yu Li
2024 J jnl
Parameter-Efficient Fine-Tuning via Circular Convolution.
CoRR
Aochuan Chen, Ziqi Gao, Zijing Liu, Yu Li, Jia Li
2024 A* conf
Parameter-Efficient Fine-Tuning with Discrete Fourier Transform.
ICML
Ziqi Gao, Qichao Wang, Aochuan Chen, Zijing Liu, Bingzhe Wu, Liang Chen, Jia Li
2024 J jnl
Parameter-Efficient Fine-Tuning with Discrete Fourier Transform.
CoRR
Ziqi Gao, Qichao Wang, Aochuan Chen, Zijing Liu, Bingzhe Wu, Liang Chen, Jia Li
2024 A* conf
Protein Multimer Structure Prediction via Prompt Learning.
ICLR
Ziqi Gao, Xiangguo Sun, Zijing Liu, Yu Li, Hong Cheng, Jia Li
2024 J jnl
Protein Multimer Structure Prediction via Prompt Learning.
CoRR
Ziqi Gao, Xiangguo Sun, Zijing Liu, Yu Li, Hong Cheng, Jia Li
2024 J jnl
SMILES-Prompting: A Novel Approach to LLM Jailbreak Attacks in Chemical Synthesis.
CoRR
Aidan Wong, He Cao, Zijing Liu, Yu Li
2024 J jnl
Stray Light Correction and Enhancement of Nocturnal Low-Light Image of Early-Morning-Orbiting Fengyun-3E Satellite.
IEEE Trans. Geosci. Remote. Sens.
Yongen Liang, Min Min, Hanlie Xu, Na Xu, Danyu Qing, Xiuqing Hu, Peng Zhang, Jing Li, Xiaoxuan Mou, Zijing Liu
2024 J jnl
SubGDiff: A Subgraph Diffusion Model to Improve Molecular Representation Learning.
CoRR
Jiying Zhang, Zijing Liu, Yu Wang, Yu Li
2024 A* conf
SubgDiff: A Subgraph Diffusion Model to Improve Molecular Representation Learning.
NeurIPS
Jiying Zhang, Zijing Liu, Yu Wang, Bin Feng, Yu Li
2024 J jnl
Survival Analysis of High-Dimensional Data With Graph Convolutional Networks and Geometric Graphs.
IEEE Trans. Neural Networks Learn. Syst.
Yurong Ling, Zijing Liu, Jing-Hao Xue
2024 A* conf
Towards Stable Representations for Protein Interface Prediction.
NeurIPS
Ziqi Gao, Zijing Liu, Yu Li, Jia Li
2023 J jnl
InstructMol: Multi-Modal Integration for Building a Versatile and Reliable Molecular Assistant in Drug Discovery.
CoRR
He Cao, Zijing Liu, Xingyu Lu, Yuan Yao, Yu Li
2023 J jnl
Representativeness of Two Global Gridded Precipitation Data Sets in the Intensity of Surface Short-Term Precipitation over China.
Remote. Sens.
Xiaocheng Wei, Yu Yu, Bo Li, Zijing Liu
2023 — conf
Research on Fuzzy Iterative Learning Control of Pneumatic Artificial Muscle.
ICIRA (2)
Huiru Duan, Shenglong Xie, Zijing Liu, Yanjian Wan
2023 J jnl
Retrieval of Atmospheric Water Vapor Content in the Environment from AHI/H8 Using Both Physical and Random Forest Methods - A Case Study for Typhoon Maria (201808).
Remote. Sens.
Linyan Zhu, Ronglian Zhou, Di Di, Wenguang Bai, Zijing Liu
2022 J jnl
Accelerating Effect of Vegetation on the Instability of Rainfall-Induced Shallow Landslides.
Remote. Sens.
Juanjuan Zhang, Haijun Qiu, Bingzhe Tang, Dongdong Yang, Ya Liu, Zijing Liu, Bingfeng Ye, Wenqi Zhou, Yaru Zhu
2022 J jnl
DTSyn: a dual-transformer-based neural network to predict synergistic drug combinations.
Briefings Bioinform.
Jing Hu, Jie Gao, Xiaomin Fang, Zijing Liu, Fan Wang, Weili Huang, Hua Wu, Guodong Zhao
2022 J jnl
Efficient Identification and Monitoring of Landslides by Time-Series InSAR Combining Single- and Multi-Look Phases.
Remote. Sens.
Zijing Liu, Haijun Qiu, Yaru Zhu, Ya Liu, Dongdong Yang, Shuyue Ma, Juanjuan Zhang, Yuyao Wang, Luyao Wang, Bingzhe Tang
2022 J jnl
Robust Bayesian optimization with reinforcement learned acquisition functions.
CoRR
Zijing Liu, Xiyao Qu, Xuejun Liu, Hongqiang Lyu
2022 J jnl
The Post-Failure Spatiotemporal Deformation of Certain Translational Landslides May Follow the Pre-Failure Pattern.
Remote. Sens.
Luyao Wang, Haijun Qiu, Wenqi Zhou, Yaru Zhu, Zijing Liu, Shuyue Ma, Dongdong Yang, Bingzhe Tang
2022 B conf
Unsteady Flow Field Prediction: Understanding the Dynamics in an Intuitive Physics Way.
ICPR
Xiyao Qu, Zijing Liu, Wei An, Hongqiang Lyu, Xuejun Liu
2021 J jnl
A new approach for generation of generalized basic probability assignment in the evidence theory.
Pattern Anal. Appl.
Yongchuan Tang, Dongdong Wu, Zijing Liu
2021 J jnl
Detecting Long-Term Deformation of a Loess Landslide from the Phase and Amplitude of Satellite SAR Images: A Retrospective Analysis for the Closure of a Tunnel Event.
Remote. Sens.
Yaru Zhu, Haijun Qiu, Zijing Liu, Jiading Wang, Dongdong Yang, Yanqian Pei, Shuyue Ma, Chi Du, Hesheng Sun, Luyao Wang
2021 J jnl
Dimension Reduction for Data with Heterogeneous Missingness.
CoRR
Yurong Ling, Zijing Liu, Jing-Hao Xue
2021 A conf
Dimension reduction for data with heterogeneous missingness.
UAI
Yurong Ling, Zijing Liu, Jing-Hao Xue
2021 — conf
Docking-based Virtual Screening with Multi-Task Learning.
BIBM
Zijing Liu, Xianbin Ye, Xiaoming Fang, Fan Wang, Hua Wu, Haifeng Wang
2021 J jnl
Docking-based Virtual Screening with Multi-Task Learning.
CoRR
Zijing Liu, Xianbin Ye, Xiaoming Fang, Fan Wang, Hua Wu, Haifeng Wang
2021 J jnl
Landslide Characteristics and Evolution: What We Can Learn from Three Adjacent Landslides.
Remote. Sens.
Dongdong Yang, Haijun Qiu, Yaru Zhu, Zijing Liu, Yanqian Pei, Shuyue Ma, Chi Du, Hesheng Sun, Ya Liu, Mingming Cao
2021 J jnl
Multi-objective optimization strategies for radiation shielding design with genetic algorithm.
Comput. Phys. Commun.
Zhenping Chen, Zhenyu Zhang, Jinsen Xie, Qian Guo, Tao Yu, Pengcheng Zhao, Zijing Liu, Chao Xie
2021 — conf
Multimodal Pre-Training Model for Sequence-based Prediction of Protein-Protein Interaction.
MLBC
Yang Xue, Zijing Liu, Xiaomin Fang, Fan Wang
2021 J jnl
Multimodal Pre-Training Model for Sequence-based Prediction of Protein-Protein Interaction.
CoRR
Yang Xue, Zijing Liu, Xiaomin Fang, Fan Wang
2021 A conf
Similarity measure for sparse time course data based on Gaussian processes.
UAI
Zijing Liu, Mauricio Barahona
2021 J jnl
Similarity measure for sparse time course data based on Gaussian processes.
CoRR
Zijing Liu, Mauricio Barahona
2021 — conf
Visualization of Zero Energy Bus Implementation Through Effective Computer Interaction.
HCI (30)
Jeremy Bowes, Sara Diamond, Greice C. Mariano, Mona Ghafouri-Azar, Sara Mozafari-Lorestani, Olufunbi Disu-Sule, Jacob Cram, Zijing Liu, Zuriel Tonatiuh Ceja De La Cruz
2020 J jnl
A new approach for generation of generalized basic probability assignment in the evidence theory.
CoRR
Dongdong Wu, Zijing Liu, Yongchuan Tang
2020 J jnl
A new classification method based on the negation of a basic probability assignment in the evidence theory.
Eng. Appl. Artif. Intell.
Dongdong Wu, Zijing Liu, Yongchuan Tang
2020 J jnl
Graph-based data clustering via multiscale community detection.
Appl. Netw. Sci.
Zijing Liu, Mauricio Barahona
2020 J jnl
Spatial and Temporal Evolution of the Infiltration Characteristics of a Loess Landslide.
ISPRS Int. J. Geo Inf.
Dongdong Yang, Haijun Qiu, Yanqian Pei, Sheng Hu, Shuyue Ma, Zijing Liu, Yan Zhang, Mingming Cao
2019 J jnl
Graph-based data clustering via multiscale community detection.
CoRR
Zijing Liu, Mauricio Barahona
2019 J jnl
Local Severe Storm Tracking and Warning in Pre-Convection Stage from the New Generation Geostationary Weather Satellite Measurements.
Remote. Sens.
Zijing Liu, Min Min, Jun Li, Fenglin Sun, Di Di, Yufei Ai, Zhenglong Li, Danyu Qin, Guicai Li, Yinjing Lin, Xiaolin Zhang
2019 J jnl
Physics-oriented optimization strategy for the energy lookup algorithm in continuous energy Monte Carlo neutron transport simulation.
Comput. Phys. Commun.
Zhenping Chen, Jinsen Xie, Qian Guo, Qin Xie, Zijing Liu, Wenjie Zeng, Chao Xie, Pengcheng Zhao, Tao Yu
2019 J jnl
Spatiotemporal Distribution of Nonseismic Landslides during the Last 22 Years in Shaanxi Province, China.
ISPRS Int. J. Geo Inf.
Haijun Qiu, Yifei Cui, Dongdong Yang, Yanqian Pei, Sheng Hu, Shuyue Ma, Junqing Hao, Zijing Liu
2018 J jnl
Geometric multiscale community detection: Markov stability and vector partitioning.
J. Complex Networks
Zijing Liu, Mauricio Barahona
2017 J jnl
Geometric Multiscale Community Detection: Markov Stability and Vector Partitioning.
CoRR
Zijing Liu, Mauricio Barahona