ZiaurRehman Tanoli

16 papers Journal 16
YearRankTypeTitle / Venue / Authors
2025 J jnl
Data-driven strategies for drug repurposing: insights, recommendations, and case studies.
Briefings Bioinform.
Susanna Savander, Nurettin Nusret Curabaz, Amna Mumtaz Abbasi, Asifullah Khan, Khalid Saeed, ZiaurRehman Tanoli
2025 J jnl
From library to landscape: integrative annotation workflows for compound libraries in drug repurposing.
Database J. Biol. Databases Curation
Jeanette Reinshagen, Brinton Seashore-Ludlow, Yojana Gadiya, Anna-Lena Gustavsson, ZiaurRehman Tanoli, Tero Aittokallio, Johanna Huchting, Annika Jenmalm-Jensen, Philip Gribbon, Andrea Zaliani, Flavio Ballante
2024 J jnl
A Survey of the Self Supervised Learning Mechanisms for Vision Transformers.
CoRR
Asifullah Khan, Anabia Sohail, Mustansar Fiaz, Mehdi Hassan, Tariq Habib Afridi, Sibghat Ullah Marwat, Farzeen Munir, Safdar Ali, Hannan Naseem, Muhammad Zaigham Zaheer, Kamran Ali, Tangina Sultana, ZiaurRehman Tanoli, Naeem Akhter
2024 J jnl
Attention-based approach to predict drug-target interactions across seven target superfamilies.
Bioinform.
Aron Schulman, Juho Rousu, Tero Aittokallio, ZiaurRehman Tanoli
2024 J jnl
Peptriever: a Bi-Encoder approach for large-scale protein-peptide binding search.
Bioinform.
Roni Gurvich, Gal Markel, ZiaurRehman Tanoli, Tomer Meirson
2024 J jnl
RepurposeDrugs: an interactive web-portal and predictive platform for repurposing mono- and combination therapies.
Briefings Bioinform.
Aleksandr Ianevski, Aleksandr Kushnir, Kristen Nader, Mitro Miihkinen, Henri Xhaard, Tero Aittokallio, ZiaurRehman Tanoli
2023 J jnl
Breeze 2.0: an interactive web-tool for visual analysis and comparison of drug response data.
Nucleic Acids Res.
Potdar Swapnil, Filipp Ianevski, Aleksandr Ianevski, ZiaurRehman Tanoli, Krister Wennerberg, Brinton Seashore-Ludlow, Olli-P. Kallioniemi, Päivi Östling, Tero Aittokallio, Saarela Jani
2022 J jnl
Minimal information for chemosensitivity assays (MICHA): a next-generation pipeline to enable the FAIRification of drug screening experiments.
Briefings Bioinform.
ZiaurRehman Tanoli, Jehad Aldahdooh, Farhan Alam, Yinyin Wang, Umair Seemab, Maddalena Fratelli, Petr Pavlis, Marián Hajdúch, Florence Bietrix, Philip Gribbon, Andrea Zaliani, Matthew D. Hall, Min Shen, Kyle R. Brimacombe, Evgeny Kulesskiy, Saarela Jani, Krister Wennerberg, Markus Vähä-Koskela, Jing Tang
2022 J jnl
SynergyFinder Plus: Toward Better Interpretation and Annotation of Drug Combination Screening Datasets.
Genom. Proteom. Bioinform.
Shuyu Zheng, Wenyu Wang, Jehad Aldahdooh, Alina Malyutina, Tolou Shadbahr, ZiaurRehman Tanoli, Alberto Pessia, Jing Tang
2022 J jnl
Using BERT to identify drug-target interactions from whole PubMed.
BMC Bioinform.
Jehad Aldahdooh, Markus Vähä-Koskela, Jing Tang, ZiaurRehman Tanoli
2021 J jnl
Exploration of databases and methods supporting drug repurposing: a comprehensive survey.
Briefings Bioinform.
ZiaurRehman Tanoli, Umair Seemab, Andreas Scherer, Krister Wennerberg, Jing Tang, Markus Vähä-Koskela
2021 J jnl
R-BERT-CNN: Drug-target interactions extraction from biomedical literature.
CoRR
Jehad Aldahdooh, ZiaurRehman Tanoli, Jing Tang
2020 J jnl
Interactive visual analysis of drug-target interaction networks using Drug Target Profiler, with applications to precision medicine and drug repurposing.
Briefings Bioinform.
ZiaurRehman Tanoli, Zaid Alam, Aleksandr Ianevski, Krister Wennerberg, Markus Vähä-Koskela, Tero Aittokallio
2019 J jnl
DrugComb: an integrative cancer drug combination data portal.
Nucleic Acids Res.
Bulat Zagidullin, Jehad Aldahdooh, Shuyu Zheng, Wenyu Wang, Yinyin Wang, Joseph Saad, Alina Malyutina, Mohieddin Jafari, ZiaurRehman Tanoli, Alberto Pessia, Jing Tang
2018 J jnl
Drug Target Commons 2.0: a community platform for systematic analysis of drug-target interaction profiles.
Database J. Biol. Databases Curation
ZiaurRehman Tanoli, Zaid Alam, Markus Vähä-Koskela, Balaguru Ravikumar, Alina Malyutina, Alok Jaiswal, Jing Tang, Krister Wennerberg, Tero Aittokallio
2017 J jnl
MediSyn: uncertainty-aware visualization of multiple biomedical datasets to support drug treatment selection.
BMC Bioinform.
Chen He, Luana Micallef, ZiaurRehman Tanoli, Samuel Kaski, Tero Aittokallio, Giulio Jacucci