Zhu-Hong You

193 papers A* 2B 2Journal 130Unranked 59
YearRankTypeTitle / Venue / Authors
2026 J jnl
A Dynamic Multi-Scale Hypergraph Learning Framework Driven by Features and Structures for ceRNA-Disease Association Prediction.
IEEE J. Biomed. Health Informatics
Xinfei Wang, Lan Huang, Yan Wang, Ren-Chu Guan, Zhu-Hong You, Fengfeng Zhou, Yu-Qing Li, Yuan Fu
2026 J jnl
A cross-modal graph structure learning prediction model for CircRNA-MiRNA interactions.
Biomed. Signal Process. Control.
Si-Qi Yao, Lei Wang, Chang-Qing Yu, Zhu-Hong You, Chen Jiang, Mengmeng Wei
2026 J jnl
A multimodal information fusion framework for accurate and robust prediction of drug-drug interactions.
Inf. Fusion
Han-Wu Zhu, Hai-Cheng Yi, Zhu-Hong You, Shi-Hui He, Xuequn Shang
2026 A* conf
Dual-Channel Learning Framework for Zero-Shot CircRNA-miRNA Interaction Prediction via State Space Modeling.
AAAI
Mengmeng Wei, Lei Wang, Zhu-Hong You, Pengwei Hu, Bowei Zhao, Zhi-An Huang, Yu-An Huang, Haicheng Yi
2026 J jnl
KA-DDI: A knowledge-adaptive contrastive learning framework for drug-drug interaction prediction.
Expert Syst. Appl.
Yu Li, Jia-Ming Liu, Yue-Chao Li, Hai-Ru You, Zhu-Hong You, Yang Yuan, Chenggang Mi
2026 J jnl
MRGCDDI: Multi-Relation Graph Contrastive Learning Without Data Augmentation for Drug-Drug Interaction Events Prediction.
IEEE J. Biomed. Health Informatics
Yu Li, Lin-Xuan Hou, Zhu-Hong You, Yang Yuan, Cheng-Gang Mi, Yu-An Huang, Hai-Cheng Yi
2026 J jnl
scProGraph: A Cell Bagging Strategy for Cell Type Annotation With Gene Interaction-Aware Explainability.
IEEE Trans. Big Data
Xinyuan Li, Yue-Chao Li, Hai-Ru You, Xuequn Shang, Leon Wong, Zhi-An Huang, Zhu-Hong You, Yu-An Huang
2025 — conf
Bridging Knowledge Gaps: Fine-Tuned RAG Frameworks for Biomedical Evidence-Based Question Answering.
ICIC (23)
Xiang-Yun Wang, Zhu-Hong You, Yu Li, Yun-Hui Yan, Yue-Chao Li
2025 J jnl
Equivariant 3D-Conditional Diffusion Model for De Novo Drug Design.
IEEE J. Biomed. Health Informatics
Jia Zheng, Hai-Cheng Yi, Zhu-Hong You
2025 J jnl
Graph Structure Learning for Tumor Microenvironment with Cell Type Annotation from non-spatial scRNA-seq data.
CoRR
Yu-An Huang, Yue-Chao Li, Hai-Ru You, Jie Pan, Xiyue Cao, Xinyuan Li, Zhi-An Huang, Zhu-Hong You
2025 J jnl
Hither-CMI: Prediction of circRNA-miRNA Interactions Based on a Hybrid Multimodal Network and Higher-Order Neighborhood Information via a Graph Convolutional Network.
J. Chem. Inf. Model.
Chen Jiang, Lei Wang, Chang-Qing Yu, Zhu-Hong You, Xin-Fei Wang, Mengmeng Wei, Tailong Shi, Si-Zhe Liang, Dengwu Wang
2025 J jnl
Integrating Transformer and Graph Attention Network for circRNA-miRNA Interaction Prediction.
IEEE J. Biomed. Health Informatics
Mengmeng Wei, Lei Wang, Bo-Wei Zhao, Xiao-Rui Su, Zhu-Hong You, De-Shuang Huang
2025 J jnl
MOLGAECL: Molecular Graph Contrastive Learning via Graph Auto-Encoder Pretraining and Fine-Tuning Based on Drug-Drug Interaction Prediction.
J. Chem. Inf. Model.
Yu Li, Lin-Xuan Hou, Hai-Cheng Yi, Zhu-Hong You, Shi-Hong Chen, Jia Zheng, Yang Yuan, Cheng-Gang Mi
2025 J jnl
Noise-Consistent Hypergraph Autoencoder Based on Contrastive Learning for Cancer ceRNA Association Prediction in Complex Biological Regulatory Networks.
J. Chem. Inf. Model.
Xin-Fei Wang, Lan Huang, Yan Wang, Ren-Chu Guan, Zhu-Hong You, Fengfeng Zhou, Yuqing Li, Ziqi Zhao
2025 J jnl
Predicting circRNA-Disease Associations through Multisource Domain-Aware Embeddings and Feature Projection Networks.
J. Chem. Inf. Model.
Si-Zhe Liang, Lei Wang, Zhu-Hong You, Chang-Qing Yu, Mengmeng Wei, Yu Wei, Tailong Shi, Chen Jiang
2025 J jnl
Regulation-aware graph learning for drug repositioning over heterogeneous biological network.
Inf. Sci.
Bo-Wei Zhao, Xiao-Rui Su, Yue Yang, Dong-Xu Li, Guo-Dong Li, Peng-Wei Hu, Zhu-Hong You, Xin Luo, Lun Hu
2025 J jnl
Toward Multilabel Classification for Multiple Disease Prediction Using Gut Microbiota Profiles.
IEEE Trans. Neural Networks Learn. Syst.
Zhi-An Huang, Pengwei Hu, Lun Hu, Zhu-Hong You, Kay Chen Tan, Yu-An Huang
2025 — conf
TriM-DTA: a Tri-Modal Fusion Framework for Drug-Target Binding Affinity Prediction.
BIBM
Han-Wu Zhu, Hai-Cheng Yi, Zhu-Hong You
2025 J jnl
UAVSeg: Dual-Encoder Cross-Scale Attention Network for UAV Images' Semantic Segmentation.
IEEE Trans. Geosci. Remote. Sens.
Zhen Wang, Zhu-Hong You, Nan Xu, Chuanlei Zhang, De-Shuang Huang
2025 — conf
Unsupervised Cell Clustering in Single-Cell RNA Sequencing Data Using a Multi-Graph Transformer.
BIBM
Chu-Xuan Zhang, Yue-Chao Li, Xinyuan Li, Zhu-Hong You, Yu-An Huang
2025 J jnl
scBIT: Integrating Single-cell Transcriptomic Data into fMRI-based Prediction for Alzheimer's Disease Diagnosis.
CoRR
Yu-An Huang, Yao Hu, Yue-Chao Li, Xiyue Cao, Xinyuan Li, Kay Chen Tan, Zhu-Hong You, Zhi-An Huang
2025 J jnl
scExGraph: Explainable graph neural network for predicting tumor environment components with single-cell sequencing data.
Knowl. Based Syst.
Zhihua Du, Jiale Yi, Jian-Qiang Li, Hai-Ru You, Zhu-Hong You, Zhi-An Huang, Yu-An Huang
2025 J jnl
scGSDR: Harnessing Gene Semantics for Single-Cell Pharmacological Profiling.
CoRR
Yu-An Huang, Xiyue Cao, Zhu-Hong You, Yue-Chao Li, Xuequn Shang, Zhi-An Huang
2025 J jnl
scTECTA: Asymmetric Deep Transfer Learning for Cross-Patient Tumor Microenvironment Single-Cell Annotation.
IEEE Trans. Comput. Biol. Bioinform.
Zi-Yi Zeng, Xi-Yue Cao, Yue-Chao Li, Hai-Ru You, Zhu-Hong You, Yu-An Huang
2024 J jnl
A PiRNA-disease association model incorporating sequence multi-source information with graph convolutional networks.
Appl. Soft Comput.
Lei Wang, Zheng-Wei Li, Jing Hu, Leon Wong, Bo-Wei Zhao, Zhu-Hong You
2024 J jnl
A multichannel graph neural network based on multisimilarity modality hypergraph contrastive learning for predicting unknown types of cancer biomarkers.
Briefings Bioinform.
Xin-Fei Wang, Lan Huang, Yan Wang, Ren-Chu Guan, Zhu-Hong You, Nan Sheng, Xuping Xie, Qixing Yang
2024 J jnl
AMDECDA: Attention Mechanism Combined With Data Ensemble Strategy for Predicting CircRNA-Disease Association.
IEEE Trans. Big Data
Lei Wang, Leon Wong, Zhu-Hong You, De-Shuang Huang
2024 J jnl
Attention-Based Learning for Predicting Drug-Drug Interactions in Knowledge Graph Embedding Based on Multisource Fusion Information.
Int. J. Intell. Syst.
Yu Li, Zhu-Hong You, Shu-Min Wang, Cheng-Gang Mi, Mei-Neng Wang, Yu-An Huang, Hai-Cheng Yi
2024 J jnl
BEROLECMI: a novel prediction method to infer circRNA-miRNA interaction from the role definition of molecular attributes and biological networks.
BMC Bioinform.
Xin-Fei Wang, Chang-Qing Yu, Zhu-Hong You, Yan Wang, Lan Huang, Yan Qiao, Lei Wang, Zheng-Wei Li
2024 J jnl
Biolinguistic graph fusion model for circRNA-miRNA association prediction.
Briefings Bioinform.
Lu-Xiang Guo, Lei Wang, Zhu-Hong You, Chang-Qing Yu, Meng-Lei Hu, Bo-Wei Zhao, Yang Li
2024 — conf
DNMDA: Deep Non-negative Matrix Factorization with Multi-level Integration for MiRNA-Drug Interaction Prediction.
BIBM
Yujie Qi, Jiaxin Yang, Yu-An Huang, Zhu-Hong You, Zimai Zhang, Lun Hu, Xi Zhou, Pengwei Hu
2024 — conf
Drug-Drug Interaction Prediction Based on Probability Transfer Multi-modal Feature Representation Learning.
BIBM
Yu Wei, Lei Wang, Chang-Qin Yu, Shuo Yang, Mengmeng Wei, Zhu-Hong You
2024 A* conf
Dual-Channel Learning Framework for Drug-Drug Interaction Prediction via Relation-Aware Heterogeneous Graph Transformer.
AAAI
Xiaorui Su, Pengwei Hu, Zhu-Hong You, Philip S. Yu, Lun Hu
2024 — conf
EELMCDA: Combining evolutionary ensemble learning with matrix feature decomposition for predicting circRNA-disease associations.
BIBM
Zheng Wang, Lei Wang, Zhu-Hong You, Lei Wang, Yang Li, Zhenyu Wang
2024 J jnl
Fusing Higher and Lower-Order Biological Information for Drug Repositioning via Graph Representation Learning.
IEEE Trans. Emerg. Top. Comput.
Bo-Wei Zhao, Lei Wang, Pengwei Hu, Leon Wong, Xiao-Rui Su, Bao-Quan Wang, Zhu-Hong You, Lun Hu
2024 — conf
GGANet: A Model for the Prediction of MiRNA-Drug Resistance Based on Contrastive Learning and Global Attention.
ICIC (LNBI 1)
Zimai Zhang, Bo-Wei Zhao, Yu-An Huang, Zhu-Hong You, Lun Hu, Xi Zhou, Pengwei Hu
2024 J jnl
GSLCDA: An Unsupervised Deep Graph Structure Learning Method for Predicting CircRNA-Disease Association.
IEEE J. Biomed. Health Informatics
Lei Wang, Zheng-Wei Li, Zhu-Hong You, De-Shuang Huang, Leon Wong
2024 J jnl
Integrated Knowledge Graph and Drug Molecular Graph Fusion via Adversarial Networks for Drug-Drug Interaction Prediction.
J. Chem. Inf. Model.
Yu Li, Zhu-Hong You, Yang Yuan, Cheng-Gang Mi, Yu-An Huang, Hai-Cheng Yi, Lin-Xuan Hou
2024 J jnl
Likelihood-based feature representation learning combined with neighborhood information for predicting circRNA-miRNA associations.
Briefings Bioinform.
Lu-Xiang Guo, Lei Wang, Zhu-Hong You, Chang-Qing Yu, Meng-Lei Hu, Bo-Wei Zhao, Yang Li
2024 J jnl
MAGCDA: A Multi-Hop Attention Graph Neural Networks Method for CircRNA-Disease Association Prediction.
IEEE J. Biomed. Health Informatics
Lei Wang, Zheng-Wei Li, Zhu-Hong You, De-Shuang Huang, Leon Wong
2024 J jnl
MHESMMR: a multilevel model for predicting the regulation of miRNAs expression by small molecules.
BMC Bioinform.
Yongjian Guan, Chang-Qing Yu, Li-Ping Li, Zhu-Hong You, Weixiao Meng, Xin-Fei Wang, Chen Yang, Lu-Xiang Guo
2024 J jnl
MathEagle: Accurate prediction of drug-drug interaction events via multi-head attention and heterogeneous attribute graph learning.
Comput. Biol. Medicine
Lin-Xuan Hou, Hai-Cheng Yi, Zhu-Hong You, Shi-Hong Chen, Jia Zheng, Chee Keong Kwoh
2024 J jnl
Motif-Aware miRNA-Disease Association Prediction via Hierarchical Attention Network.
IEEE J. Biomed. Health Informatics
Bo-Wei Zhao, Yi-Zhou He, Xiao-Rui Su, Yue Yang, Guo-Dong Li, Yu-An Huang, Peng-Wei Hu, Zhu-Hong You, Lun Hu
2024 J jnl
Multi-view learning framework for predicting unknown types of cancer markers via directed graph neural networks fitting regulatory networks.
Briefings Bioinform.
Xin-Fei Wang, Lan Huang, Yan Wang, Ren-Chu Guan, Zhu-Hong You, Nan Sheng, Xuping Xie, Wenju Hou
2024 J jnl
RBNE-CMI: An Efficient Method for Predicting circRNA-miRNA Interactions via Multiattribute Incomplete Heterogeneous Network Embedding.
J. Chem. Inf. Model.
Chang-Qing Yu, Xin-Fei Wang, Li-Ping Li, Zhu-Hong You, Zhong-Hao Ren, Peng Chu, Feng Guo, Zhen-Yu Wang
2024 J jnl
SiSGC: A Drug Repositioning Prediction Model Based on Heterogeneous Simplifying Graph Convolution.
J. Chem. Inf. Model.
Zhong-Hao Ren, Chang-Qing Yu, Li-Ping Li, Zhu-Hong You, Zheng-Wei Li, Shanwen Zhang, Xiangxiang Zeng, Yi-Fan Shang
2023 — conf
A Novel Graph Representation Learning Model for Drug Repositioning Using Graph Transition Probability Matrix Over Heterogenous Information Networks.
ICIC (3)
Dong-Xu Li, Xun Deng, Bo-Wei Zhao, Xiao-Rui Su, Guo-Dong Li, Zhu-Hong You, Peng-Wei Hu, Lun Hu
2023 J jnl
A feature extraction method based on noise reduction for circRNA-miRNA interaction prediction combining multi-structure features in the association networks.
Briefings Bioinform.
Xin-Fei Wang, Changqing Yu, Zhu-Hong You, Li-Ping Li, Wenzhun Huang, Zhong-Hao Ren, Yue-Chao Li, Weixiao Meng
2023 J jnl
Adversarial dense graph convolutional networks for single-cell classification.
Bioinform.
Kangwei Wang, Zhengwei Li, Zhu-Hong You, Pengyong Han, Ru Nie
2023 J jnl
An efficient circRNA-miRNA interaction prediction model by combining biological text mining and wavelet diffusion-based sparse network structure embedding.
Comput. Biol. Medicine
Xin-Fei Wang, Chang-Qing Yu, Zhu-Hong You, Yan Qiao, Zheng-Wei Li, Wenzhun Huang
2023 J jnl
BCMCMI: A Fusion Model for Predicting circRNA-miRNA Interactions Combining Semantic and Meta-path.
J. Chem. Inf. Model.
Mengmeng Wei, Chang-Qing Yu, Li-Ping Li, Zhu-Hong You, Lei Wang
2023 — conf
CAMPEOD: A Cross Attention-Based Multi-Scale Patch Embedding Organoid Detection Model.
BIBM
Xun Deng, Lun Hu, Zhu-Hong You, Peng-Wei Hu
2023 J jnl
Combining K Nearest Neighbor With Nonnegative Matrix Factorization for Predicting Circrna-Disease Associations.
IEEE ACM Trans. Comput. Biol. Bioinform.
Mei-Neng Wang, Xue-Jun Xie, Zhu-Hong You, Leon Wong, Li-Ping Li, Zhan-Heng Chen
2023 — conf
Deep-USIpred: identifying substrates of ubiquitin protein ligases E3 and deubiquitinases with pretrained protein embedding and bayesian neural network.
BIBM
Jia Wang, Gui-Qing Pan, Jian-Qiang Li, Xue-Qun Shang, Zhu-Hong You, Yu-An Huang
2023 J jnl
GKLOMLI: a link prediction model for inferring miRNA-lncRNA interactions by using Gaussian kernel-based method on network profile and linear optimization algorithm.
BMC Bioinform.
Leon Wong, Lei Wang, Zhu-Hong You, Chang-An Yuan, Yu-An Huang, Mei-Yuan Cao
2023 J jnl
Knowledge graph embedding for profiling the interaction between transcription factors and their target genes.
PLoS Comput. Biol.
Yang-Han Wu, Yu-An Huang, Jian-Qiang Li, Zhu-Hong You, Peng-Wei Hu, Lun Hu, Victor C. M. Leung, Zhihua Du
2023 J jnl
MGRCDA: Metagraph Recommendation Method for Predicting CircRNA-Disease Association.
IEEE Trans. Cybern.
Lei Wang, Zhu-Hong You, De-Shuang Huang, Jianqiang Li
2023 — conf
Multi-level Subgraph Representation Learning for Drug-Disease Association Prediction Over Heterogeneous Biological Information Network.
ICIC (3)
Bo-Wei Zhao, Xiao-Rui Su, Yue Yang, Dong-Xu Li, Peng-Wei Hu, Zhu-Hong You, Lun Hu
2023 J jnl
PPAEDTI: Personalized Propagation Auto-Encoder Model for Predicting Drug-Target Interactions.
IEEE J. Biomed. Health Informatics
Yue-Chao Li, Zhu-Hong You, Changqing Yu, Lei Wang, Leon Wong, Lun Hu, Pengwei Hu, Yu-An Huang
2023 J jnl
Predicting MiRNA-Disease Associations by Graph Representation Learning Based on Jumping Knowledge Networks.
IEEE ACM Trans. Comput. Biol. Bioinform.
Zheng-Wei Li, Qiankun Wang, Chang-An Yuan, Pengyong Han, Zhu-Hong You, Lei Wang
2023 J jnl
Predicting Mirna-Disease Associations Based on Neighbor Selection Graph Attention Networks.
IEEE ACM Trans. Comput. Biol. Bioinform.
Huan Zhao, Zhengwei Li, Zhu-Hong You, Ru Nie, Tangbo Zhong
2023 J jnl
SPRDA: a link prediction approach based on the structural perturbation to infer disease-associated Piwi-interacting RNAs.
Briefings Bioinform.
Kai Zheng, Xin-lu Zhang, Lei Wang, Zhu-Hong You, Bo-Ya Ji, Xiao Liang, Zheng-Wei Li
2023 J jnl
iGRLDTI: an improved graph representation learning method for predicting drug-target interactions over heterogeneous biological information network.
Bioinform.
Bo-Wei Zhao, Xiao-Rui Su, Peng-Wei Hu, Yu-An Huang, Zhu-Hong You, Lun Hu
2022 J jnl
A biomedical knowledge graph-based method for drug-drug interactions prediction through combining local and global features with deep neural networks.
Briefings Bioinform.
Zhong-Hao Ren, Zhu-Hong You, Changqing Yu, Li-Ping Li, Yongjian Guan, Lu-Xiang Guo, Jie Pan
2022 J jnl
A novel circRNA-miRNA association prediction model based on structural deep neural network embedding.
Briefings Bioinform.
Lu-Xiang Guo, Zhu-Hong You, Lei Wang, Changqing Yu, Bo-Wei Zhao, Zhong-Hao Ren, Jie Pan
2022 J jnl
Graph representation learning in bioinformatics: trends, methods and applications.
Briefings Bioinform.
Hai-Cheng Yi, Zhu-Hong You, De-Shuang Huang, Chee Keong Kwoh
2022 J jnl
GraphTGI: an attention-based graph embedding model for predicting TF-target gene interactions.
Briefings Bioinform.
Zhihua Du, Yang-Han Wu, Yu-An Huang, Jie Chen, Gui-Qing Pan, Lun Hu, Zhu-Hong You, Jian-Qiang Li
2022 J jnl
HINGRL: predicting drug-disease associations with graph representation learning on heterogeneous information networks.
Briefings Bioinform.
Bo-Wei Zhao, Lun Hu, Zhu-Hong You, Lei Wang, Xiao-Rui Su
2022 J jnl
Identifying Protein Complexes From Protein-Protein Interaction Networks Based on Fuzzy Clustering and GO Semantic Information.
IEEE ACM Trans. Comput. Biol. Bioinform.
Xiangyu Pan, Lun Hu, Pengwei Hu, Zhu-Hong You
2022 J jnl
Line graph attention networks for predicting disease-associated Piwi-interacting RNAs.
Briefings Bioinform.
Kai Zheng, Xin-lu Zhang, Lei Wang, Zhu-Hong You, Zhaohui Zhan, Hao-Yuan Li
2022 J jnl
MNMDCDA: prediction of circRNA-disease associations by learning mixed neighborhood information from multiple distances.
Briefings Bioinform.
Yang Li, Xue-Gang Hu, Lei Wang, Pei-Pei Li, Zhu-Hong You
2022 — conf
MRLDTI: A Meta-path-Based Representation Learning Model for Drug-Target Interaction Prediction.
ICIC (2)
Bo-Wei Zhao, Lun Hu, Pengwei Hu, Zhu-Hong You, Xiao-Rui Su, Dong-Xu Li, Zhan-Heng Chen, Ping Zhang
2022 J jnl
Multi-view heterogeneous molecular network representation learning for protein-protein interaction prediction.
BMC Bioinform.
Xiao-Rui Su, Lun Hu, Zhu-Hong You, Pengwei Hu, Bo-Wei Zhao
2022 J jnl
NSECDA: Natural Semantic Enhancement for CircRNA-Disease Association Prediction.
IEEE J. Biomed. Health Informatics
Lei Wang, Leon Wong, Zhu-Hong You, De-Shuang Huang, Xiao-Rui Su, Bo-Wei Zhao
2022 — conf
Predicting Drug-Disease Associations via Meta-path Representation Learning based on Heterogeneous Information Net works.
ICIC (2)
Menglong Zhang, Bo-Wei Zhao, Lun Hu, Zhu-Hong You, Zhan-Heng Chen
2022 — conf
Predicting circRNA-disease associations using similarity assessing graph convolution from multi-source information networks.
BIBM
Yang Li, Xue-Gang Hu, Pei-Pei Li, Lei Wang, Zhu-Hong You
2022 J jnl
Predicting miRNA-disease associations based on graph random propagation network and attention network.
Briefings Bioinform.
Tangbo Zhong, Zhengwei Li, Zhu-Hong You, Ru Nie, Huan Zhao
2022 J jnl
Robust and accurate prediction of self-interacting proteins from protein sequence information by exploiting weighted sparse representation based classifier.
BMC Bioinform.
Yang Li, Xuegang Hu, Zhu-Hong You, Li-Ping Li, Pei-Pei Li, Yan-Bin Wang, Yu-An Huang
2022 J jnl
iGRLCDA: identifying circRNA-disease association based on graph representation learning.
Briefings Bioinform.
Hanyuan Zhang, Lei Wang, Zhu-Hong You, Lun Hu, Bo-Wei Zhao, Zheng-Wei Li, Yang-Ming Li
2021 — conf
A Multi-graph Deep Learning Model for Predicting Drug-Disease Associations.
ICIC (3)
Bo-Wei Zhao, Zhu-Hong You, Lun Hu, Leon Wong, Bo-Ya Ji, Ping Zhang
2021 J jnl
A computational approach for predicting drug-target interactions from protein sequence and drug substructure fingerprint information.
Int. J. Intell. Syst.
Yang Li, Xiaozhang Liu, Zhu-Hong You, Li-Ping Li, Jian-Xin Guo, Zheng Wang
2021 J jnl
A graph auto-encoder model for miRNA-disease associations prediction.
Briefings Bioinform.
Zhengwei Li, Jiashu Li, Ru Nie, Zhu-Hong You, Wenzheng Bao
2021 J jnl
A learning-based method to predict LncRNA-disease associations by combining CNN and ELM.
BMC Bioinform.
Zhen-Hao Guo, Zhan-Heng Chen, Zhu-Hong You, Yan-Bin Wang, Hai-Cheng Yi, Mei-Neng Wang
2021 J jnl
A survey on computational models for predicting protein-protein interactions.
Briefings Bioinform.
Lun Hu, Xiaojuan Wang, Yu-An Huang, Pengwei Hu, Zhu-Hong You
2021 — conf
CNNEMS: Using Convolutional Neural Networks to Predict Drug-Target Interactions by Combining Protein Evolution and Molecular Structures Information.
ICIC (3)
Xin Yan, Zhu-Hong You, Lei Wang, Peng-Peng Chen
2021 — conf
Detection of Drug-Drug Interactions Through Knowledge Graph Integrating Multi-attention with Capsule Network.
ICIC (3)
Xiao-Rui Su, Zhu-Hong You, Hai-Cheng Yi, Bo-Wei Zhao
2021 J jnl
Efficient framework for predicting MiRNA-disease associations based on improved hybrid collaborative filtering.
BMC Medical Informatics Decis. Mak.
Ru Nie, Zhengwei Li, Zhu-Hong You, Wenzheng Bao, Jiashu Li
2021 J jnl
FWHT-RF: A Novel Computational Approach to Predict Plant Protein-Protein Interactions via an Ensemble Learning Method.
Sci. Program.
Jie Pan, Li-Ping Li, Changqing Yu, Zhu-Hong You, Zhong-Hao Ren, Jing-Yu Tang
2021 J jnl
HiSCF: leveraging higher-order structures for clustering analysis in biological networks.
Bioinform.
Lun Hu, Jun Zhang, Xiangyu Pan, Hong Yan, Zhu-Hong You
2021 J jnl
IMS-CDA: Prediction of CircRNA-Disease Associations From the Integration of Multisource Similarity Information With Deep Stacked Autoencoder Model.
IEEE Trans. Cybern.
Lei Wang, Zhu-Hong You, Jian-Qiang Li, Yu-An Huang
2021 J jnl
In silico drug repositioning using deep learning and comprehensive similarity measures.
BMC Bioinform.
Hai-Cheng Yi, Zhu-Hong You, Lei Wang, Xiao-Rui Su, Xi Zhou, Tong-Hai Jiang
2021 J jnl
LDGRNMF: LncRNA-disease associations prediction based on graph regularized non-negative matrix factorization.
Neurocomputing
Mei-Neng Wang, Zhu-Hong You, Lei Wang, Li-Ping Li, Kai Zheng
2021 J jnl
Learning Representation of Molecules in Association Network for Predicting Intermolecular Associations.
IEEE ACM Trans. Comput. Biol. Bioinform.
Hai-Cheng Yi, Zhu-Hong You, Zhen-Hao Guo, De-Shuang Huang, Keith C. C. Chan
2021 J jnl
Learning from low-rank multimodal representations for predicting disease-drug associations.
BMC Medical Informatics Decis. Mak.
Pengwei Hu, Yuan Huang, Jing Mei, Henry Leung, Zhanheng Chen, Ze-min Kuang, Zhu-Hong You, Lun Hu
2021 J jnl
MISSIM: An Incremental Learning-Based Model With Applications to the Prediction of miRNA-Disease Association.
IEEE ACM Trans. Comput. Biol. Bioinform.
Kai Zheng, Zhu-Hong You, Lei Wang, Yi-Ran Li, Ji-Ren Zhou, Haitao Zeng
2021 J jnl
MeSHHeading2vec: a new method for representing MeSH headings as vectors based on graph embedding algorithm.
Briefings Bioinform.
Zhen-Hao Guo, Zhu-Hong You, De-Shuang Huang, Hai-Cheng Yi, Kai Zheng, Zhan-Heng Chen, Yan-Bin Wang
2021 J jnl
NMFCDA: Combining randomization-based neural network with non-negative matrix factorization for predicting CircRNA-disease association.
Appl. Soft Comput.
Lei Wang, Zhu-Hong You, Xi Zhou, Xin Yan, Hao-Yuan Li, Yu-An Huang
2021 — conf
Predicting miRNA-Disease Associations via a New MeSH Headings Representation of Diseases and eXtreme Gradient Boosting.
ICIC (3)
Bo-Ya Ji, Zhu-Hong You, Lei Wang, Leon Wong, Xiao-Rui Su, Bo-Wei Zhao
2021 J jnl
Predicting microRNA-disease associations from lncRNA-microRNA interactions via Multiview Multitask Learning.
Briefings Bioinform.
Yu-An Huang, Keith C. C. Chan, Zhu-Hong You, Pengwei Hu, Lei Wang, Zhi-An Huang
2021 — conf
Protein-Protein Interaction Prediction by Integrating Sequence Information and Heterogeneous Network Representation.
ICIC (3)
Xiao-Rui Su, Zhu-Hong You, Zhan-Heng Chen, Hai-Cheng Yi, Zhen-Hao Guo
2021 J jnl
SGANRDA: semi-supervised generative adversarial networks for predicting circRNA-disease associations.
Briefings Bioinform.
Lei Wang, Xin Yan, Zhu-Hong You, Xi Zhou, Hao-Yuan Li, Yu-An Huang
2021 J jnl
Self-Interacting Proteins Prediction from PSSM Based on Evolutionary Information.
Sci. Program.
Zheng Wang, Yang Li, Li-Ping Li, Zhu-Hong You, Wenzhun Huang
2020 — conf
A Gaussian Kernel Similarity-Based Linear Optimization Model for Predicting miRNA-lncRNA Interactions.
ICIC (2)
Leon Wong, Zhu-Hong You, Yu-An Huang, Xi Zhou, Mei-Yuan Cao
2020 — conf
A Highly Efficient Biomolecular Network Representation Model for Predicting Drug-Disease Associations.
ICIC (3)
Han-Jing Jiang, Zhu-Hong You, Lun Hu, Zhen-Hao Guo, Bo-Ya Ji, Leon Wong
2020 — conf
A MapReduce-Based Parallel Random Forest Approach for Predicting Large-Scale Protein-Protein Interactions.
ICIC (3)
Bo-Ya Ji, Zhu-Hong You, Long Yang, Ji-Ren Zhou, Pengwei Hu
2020 — conf
A Network Embedding-Based Method for Predicting miRNA-Disease Associations by Integrating Multiple Information.
ICIC (3)
Hao-Yuan Li, Zhu-Hong You, Zheng-Wei Li, Ji-Ren Zhou, Pengwei Hu
2020 — conf
A Novel Computational Approach for Predicting Drug-Target Interactions via Network Representation Learning.
ICIC (2)
Xiao-Rui Su, Zhu-Hong You, Ji-Ren Zhou, Hai-Cheng Yi, Xiao Li
2020 — conf
A Novel Computational Method for Predicting LncRNA-Disease Associations from Heterogeneous Information Network with SDNE Embedding Model.
ICIC (2)
Ping Zhang, Bo-Wei Zhao, Leon Wong, Zhu-Hong You, Zhen-Hao Guo, Hai-Cheng Yi
2020 — conf
A Unified Deep Biological Sequence Representation Learning with Pretrained Encoder-Decoder Model.
ICIC (2)
Hai-Cheng Yi, Zhu-Hong You, Xiao-Rui Su, De-Shuang Huang, Zhen-Hao Guo
2020 J jnl
A deep learning-based method for drug-target interaction prediction based on long short-term memory neural network.
BMC Medical Informatics Decis. Mak.
Yan-Bin Wang, Zhu-Hong You, Shan Yang, Hai-Cheng Yi, Zhan-Heng Chen, Kai Zheng
2020 J jnl
An efficient approach based on multi-sources information to predict circRNA-disease associations using deep convolutional neural network.
Bioinform.
Lei Wang, Zhu-Hong You, Yu-An Huang, De-Shuang Huang, Keith C. C. Chan
2020 J jnl
Combining High Speed ELM Learning with a Deep Convolutional Neural Network Feature Encoding for Predicting Protein-RNA Interactions.
IEEE ACM Trans. Comput. Biol. Bioinform.
Lei Wang, Zhu-Hong You, De-Shuang Huang, Fengfeng Zhou
2020 — conf
DTIFS: A Novel Computational Approach for Predicting Drug-Target Interactions from Drug Structure and Protein Sequence.
ICIC (2)
Xin Yan, Zhu-Hong You, Lei Wang, Li-Ping Li, Kai Zheng, Mei-Neng Wang
2020 J jnl
GANCDA: a novel method for predicting circRNA-disease associations based on deep generative adversarial network.
Int. J. Data Min. Bioinform.
Xin Yan, Lei Wang, Zhu-Hong You, Li-Ping Li, Kai Zheng
2020 J jnl
GCNCDA: A new method for predicting circRNA-disease associations based on Graph Convolutional Network Algorithm.
PLoS Comput. Biol.
Lei Wang, Zhu-Hong You, Yang-Ming Li, Kai Zheng, Yu-An Huang
2020 — conf
GCNSP: A Novel Prediction Method of Self-Interacting Proteins Based on Graph Convolutional Networks.
ICIC (2)
Lei Wang, Zhu-Hong You, Xin Yan, Kai Zheng, Zheng-Wei Li
2020 J jnl
GNMFLMI: Graph Regularized Nonnegative Matrix Factorization for Predicting LncRNA-MiRNA Interactions.
IEEE Access
Mei-Neng Wang, Zhu-Hong You, Li-Ping Li, Leon Wong, Zhan-Heng Chen, Chengzhi Gan
2020 J jnl
Graph convolution for predicting associations between miRNA and drug resistance.
Bioinform.
Yu-An Huang, Pengwei Hu, Keith C. C. Chan, Zhu-Hong You
2020 — conf
Identification of Autistic Risk Genes Using Developmental Brain Gene Expression Data.
ICIC (2)
Zhi-An Huang, Yu-An Huang, Zhu-Hong You, Shanwen Zhang, Changqing Yu, Wenzhun Huang
2020 J jnl
Incorporating the Coevolving Information of Substrates in Predicting HIV-1 Protease Cleavage Sites.
IEEE ACM Trans. Comput. Biol. Bioinform.
Lun Hu, Pengwei Hu, Xin Luo, Xiaohui Yuan, Zhu-Hong You
2020 — conf
Inferring Disease-Associated Piwi-Interacting RNAs via Graph Attention Networks.
ICIC (2)
Kai Zheng, Zhu-Hong You, Lei Wang, Leon Wong, Zhan-Heng Chen
2020 — conf
Inferring Drug-miRNA Associations by Integrating Drug SMILES and MiRNA Sequence Information.
ICIC (2)
Zhen-Hao Guo, Zhu-Hong You, Li-Ping Li, Zhan-Heng Chen, Hai-Cheng Yi, Yan-Bin Wang
2020 J jnl
Learning Multimodal Networks From Heterogeneous Data for Prediction of lncRNA-miRNA Interactions.
IEEE ACM Trans. Comput. Biol. Bioinform.
Pengwei Hu, Yu-An Huang, Keith C. C. Chan, Zhu-Hong You
2020 J jnl
NEMPD: a network embedding-based method for predicting miRNA-disease associations by preserving behavior and attribute information.
BMC Bioinform.
Bo-Ya Ji, Zhu-Hong You, Zhan-Heng Chen, Leon Wong, Hai-Cheng Yi
2020 — conf
Predicting Drug-Target Interactions by Node2vec Node Embedding in Molecular Associations Network.
ICIC (2)
Zhan-Heng Chen, Zhu-Hong You, Zhen-Hao Guo, Hai-Cheng Yi, Gong-Xu Luo, Yan-Bin Wang
2020 — conf
Predicting Human Disease-Associated piRNAs Based on Multi-source Information and Random Forest.
ICIC (2)
Kai Zheng, Zhu-Hong You, Lei Wang, Hao-Yuan Li, Bo-Ya Ji
2020 — conf
Predicting LncRNA-miRNA Interactions via Network Embedding with Integrated Structure and Attribute Information.
ICIC (2)
Bo-Wei Zhao, Ping Zhang, Zhu-Hong You, Ji-Ren Zhou, Xiao Li
2020 J jnl
Prediction of Drug-Target Interactions by Ensemble Learning Method From Protein Sequence and Drug Fingerprint.
IEEE Access
Xinke Zhan, Zhu-Hong You, Jinfan Cai, Liping Li, Changqing Yu, Jie Pan, Jiangkun Kong
2020 — conf
Prediction of lncRNA-Disease Associations from Heterogeneous Information Network Based on DeepWalk Embedding Model.
ICIC (3)
Xiao-yu Song, Tong Liu, Ze-Yang Qiu, Zhu-Hong You, Yue Sun, Li-Ting Jin, Xiao-Bei Feng, Lin Zhu
2020 — conf
Prediction of lncRNA-miRNA Interactions via an Embedding Learning Graph Factorize Over Heterogeneous Information Network.
ICIC (2)
Ji-Ren Zhou, Zhu-Hong You, Li Cheng, Xi Zhou, Hao-Yuan Li
2020 J jnl
RPI-SE: a stacking ensemble learning framework for ncRNA-protein interactions prediction using sequence information.
BMC Bioinform.
Hai-Cheng Yi, Zhu-Hong You, Mei-Neng Wang, Zhen-Hao Guo, Yan-Bin Wang, Ji-Ren Zhou
2020 J jnl
Using Weighted Extreme Learning Machine Combined With Scale-Invariant Feature Transform to Predict Protein-Protein Interactions From Protein Evolutionary Information.
IEEE ACM Trans. Comput. Biol. Bioinform.
Jianqiang Li, Xiaofeng Shi, Zhu-Hong You, Hai-Cheng Yi, Zhuangzhuang Chen, Qiuzhen Lin, Min Fang
2020 — conf
WGMFDDA: A Novel Weighted-Based Graph Regularized Matrix Factorization for Predicting Drug-Disease Associations.
ICIC (3)
Mei-Neng Wang, Zhu-Hong You, Li-Ping Li, Zhan-Heng Chen, Xue-Jun Xie
2020 J jnl
iCDA-CGR: Identification of circRNA-disease associations based on Chaos Game Representation.
PLoS Comput. Biol.
Kai Zheng, Zhu-Hong You, Jian-Qiang Li, Lei Wang, Zhen-Hao Guo, Yu-An Huang
2019 — conf
A Gated Recurrent Unit Model for Drug Repositioning by Combining Comprehensive Similarity Measures and Gaussian Interaction Profile Kernel.
ICIC (2)
Tao Wang, Hai-Cheng Yi, Zhu-Hong You, Li-Ping Li, Yan-Bin Wang, Lun Hu, Leon Wong
2019 J jnl
An Efficient Ensemble Learning Approach for Predicting Protein-Protein Interactions by Integrating Protein Primary Sequence and Evolutionary Information.
IEEE ACM Trans. Comput. Biol. Bioinform.
Zhu-Hong You, Wenzhun Huang, Shanwen Zhang, Yu-An Huang, Changqing Yu, Li-Ping Li
2019 — conf
An Efficient LightGBM Model to Predict Protein Self-interacting Using Chebyshev Moments and Bi-gram.
ICIC (2)
Zhaohui Zhan, Zhu-Hong You, Yong Zhou, Kai Zheng, Zheng-Wei Li
2019 J jnl
CGMDA: An Approach to Predict and Validate MicroRNA-Disease Associations by Utilizing Chaos Game Representation and LightGBM.
IEEE Access
Kai Zheng, Lei Wang, Zhu-Hong You
2019 — conf
Combining Evolutionary Information and Sparse Bayesian Probability Model to Accurately Predict Self-interacting Proteins.
ICIC (2)
Yan-Bin Wang, Zhu-Hong You, Hai-Cheng Yi, Zhan-Heng Chen, Zhen-Hao Guo, Kai Zheng
2019 — conf
Combining High Speed ELM with a CNN Feature Encoding to Predict LncRNA-Disease Associations.
ICIC (2)
Zhen-Hao Guo, Zhu-Hong You, Li-Ping Li, Yan-Bin Wang, Zhan-Heng Chen
2019 — conf
Combining LSTM Network Model and Wavelet Transform for Predicting Self-interacting Proteins.
ICIC (1)
Zhan-Heng Chen, Zhu-Hong You, Li-Ping Li, Zhen-Hao Guo, Pengwei Hu, Han-Jing Jiang
2019 J jnl
Improved Prediction of Protein-Protein Interactions Using Descriptors Derived From PSSM via Gray Level Co-Occurrence Matrix.
IEEE Access
Hui-Juan Zhu, Zhu-Hong You, Wei-Lei Shi, Shoukun Xu, Tong-Hai Jiang, Li-Hua Zhuang
2019 — conf
In Silico Identification of Anticancer Peptides with Stacking Heterogeneous Ensemble Learning Model and Sequence Information.
ICIC (2)
Hai-Cheng Yi, Zhu-Hong You, Yan-Bin Wang, Zhan-Heng Chen, Zhen-Hao Guo, Hui-Juan Zhu
2019 J jnl
LMTRDA: Using logistic model tree to predict MiRNA-disease associations by fusing multi-source information of sequences and similarities.
PLoS Comput. Biol.
Lei Wang, Zhu-Hong You, Xing Chen, Yang-Ming Li, Ya-Nan Dong, Li-Ping Li, Kai Zheng
2019 — conf
MISSIM: Improved miRNA-Disease Association Prediction Model Based on Chaos Game Representation and Broad Learning System.
ICIC (3)
Kai Zheng, Zhu-Hong You, Lei Wang, Yi-Ran Li, Yan-Bin Wang, Han-Jing Jiang
2019 J jnl
MicroRNAs and complex diseases: from experimental results to computational models.
Briefings Bioinform.
Xing Chen, Di Xie, Qi Zhao, Zhu-Hong You
2019 — conf
Precise Prediction of Pathogenic Microorganisms Using 16S rRNA Gene Sequences.
ICIC (2)
Yu-An Huang, Zhi-An Huang, Zhu-Hong You, Pengwei Hu, Li-Ping Li, Zheng-Wei Li, Lei Wang
2019 — conf
Predicting circRNA-disease associations using deep generative adversarial network based on multi-source fusion information.
BIBM
Lei Wang, Zhu-Hong You, Li-Ping Li, Kai Zheng, Yan-Bin Wang
2019 — conf
Predicting of Drug-Disease Associations via Sparse Auto-Encoder-Based Rotation Forest.
ICIC (3)
Han-Jing Jiang, Zhu-Hong You, Kai Zheng, Zhan-Heng Chen
2018 J jnl
A Computational-Based Method for Predicting Drug-Target Interactions by Using Stacked Autoencoder Deep Neural Network.
J. Comput. Biol.
Lei Wang, Zhu-Hong You, Xing Chen, Shixiong Xia, Feng Liu, Xin Yan, Yong Zhou, Kejian Song
2018 J jnl
A novel approach based on KATZ measure to predict associations of human microbiota with non-infectious diseases.
Bioinform.
Xing Chen, Yu-An Huang, Zhu-Hong You, Guiying Yan, Xuesong Wang
2018 J jnl
An improved efficient rotation forest algorithm to predict the interactions among proteins.
Soft Comput.
Lei Wang, Zhu-Hong You, Shixiong Xia, Xing Chen, Xin Yan, Yong Zhou, Feng Liu
2018 J jnl
BNPMDA: Bipartite Network Projection for MiRNA-Disease Association prediction.
Bioinform.
Xing Chen, Di Xie, Lei Wang, Qi Zhao, Zhu-Hong You, Hongsheng Liu
2018 J jnl
Constructing prediction models from expression profiles for large scale lncRNA-miRNA interaction profiling.
Bioinform.
Yu-An Huang, Keith C. C. Chan, Zhu-Hong You
2018 — conf
Discovering an Integrated Network in Heterogeneous Data for Predicting lncRNA-miRNA Interactions.
ICIC (1)
Pengwei Hu, Yu-An Huang, Keith C. C. Chan, Zhu-Hong You
2018 J jnl
DroidDet: Effective and robust detection of android malware using static analysis along with rotation forest model.
Neurocomputing
Hui-Juan Zhu, Zhu-Hong You, Zexuan Zhu, Wei-Lei Shi, Xing Chen, Li Cheng
2018 — conf
Efficient Framework for Predicting ncRNA-Protein Interactions Based on Sequence Information by Deep Learning.
ICIC (2)
Zhaohui Zhan, Zhu-Hong You, Yong Zhou, Li-Ping Li, Zheng-Wei Li
2018 J jnl
HEMD: a highly efficient random forest-based malware detection framework for Android.
Neural Comput. Appl.
Hui-Juan Zhu, Tonghai Jiang, Bo Ma, Zhu-Hong You, Wei-Lei Shi, Li Cheng
2018 J jnl
Incorporation of Efficient Second-Order Solvers Into Latent Factor Models for Accurate Prediction of Missing QoS Data.
IEEE Trans. Cybern.
Xin Luo, MengChu Zhou, Shuai Li, Yunni Xia, Zhu-Hong You, Qingsheng Zhu, Hareton Leung
2018 — conf
Learning Latent Patterns in Molecular Data for Explainable Drug Side Effects Prediction.
BIBM
Pengwei Hu, Zhu-Hong You, Tiantian He, Shaochun Li, Shuhang Gu, Keith C. C. Chan
2018 J jnl
Prediction of protein self-interactions using stacked long short-term memory from protein sequences information.
BMC Syst. Biol.
Yan-Bin Wang, Zhu-Hong You, Xiao Li, Tong-Hai Jiang, Li Cheng, Zhan-Heng Chen
2018 — conf
RP-FIRF: Prediction of Self-interacting Proteins Using Random Projection Classifier Combining with Finite Impulse Response Filter.
ICIC (2)
Zhan-Heng Chen, Zhu-Hong You, Liping Li, Yan-Bin Wang, Xiao Li
2017 J jnl
A novel approach based on KATZ measure to predict associations of human microbiota with non-infectious diseases.
Bioinform.
Xing Chen, Yu-An Huang, Zhu-Hong You, Guiying Yan, Xuesong Wang
2017 J jnl
An improved sequence-based prediction protocol for protein-protein interactions using amino acids substitution matrix and rotation forest ensemble classifiers.
Neurocomputing
Zhu-Hong You, Xiao Li, Keith C. C. Chan
2017 — conf
Computational Methods for the Prediction of Drug-Target Interactions from Drug Fingerprints and Protein Sequences by Stacked Auto-Encoder Deep Neural Network.
ISBRA
Lei Wang, Zhu-Hong You, Xing Chen, Shixiong Xia, Feng Liu, Xin Yan, Yong Zhou
2017 J jnl
Distributed Winner-Take-All in Dynamic Networks.
IEEE Trans. Autom. Control.
Shuai Li, MengChu Zhou, Xin Luo, Zhu-Hong You
2017 J jnl
Highly Efficient Framework for Predicting Interactions Between Proteins.
IEEE Trans. Cybern.
Zhu-Hong You, MengChu Zhou, Xin Luo, Shuai Li
2017 J jnl
Identifying Spurious Interactions in the Protein-Protein Interaction Networks Using Local Similarity Preserving Embedding.
IEEE ACM Trans. Comput. Biol. Bioinform.
Lin Zhu, Suping Deng, Zhu-Hong You, De-Shuang Huang
2017 J jnl
Long non-coding RNAs and complex diseases: from experimental results to computational models.
Briefings Bioinform.
Xing Chen, Chenggang Clarence Yan, Xu Zhang, Zhu-Hong You
2017 J jnl
NRDTD: a database for clinically or experimentally supported non-coding RNAs and drug targets associations.
Database J. Biol. Databases Curation
Xing Chen, Ya-Zhou Sun, De-Hong Zhang, Jian-Qiang Li, Guiying Yan, Ji-Yong An, Zhu-Hong You
2017 J jnl
PBMDA: A novel and effective path-based computational model for miRNA-disease association prediction.
PLoS Comput. Biol.
Zhu-Hong You, Zhi-An Huang, Zexuan Zhu, Guiying Yan, Zheng-Wei Li, Zhenkun Wen, Xing Chen
2017 J jnl
PSPEL: In Silico Prediction of Self-Interacting Proteins from Amino Acids Sequences Using Ensemble Learning.
IEEE ACM Trans. Comput. Biol. Bioinform.
Jian-Qiang Li, Zhu-Hong You, Xiao Li, Zhong Ming, Xing Chen
2016 J jnl
A Nonnegative Latent Factor Model for Large-Scale Sparse Matrices in Recommender Systems via Alternating Direction Method.
IEEE Trans. Neural Networks Learn. Syst.
Xin Luo, MengChu Zhou, Shuai Li, Zhu-Hong You, Yunni Xia, Qingsheng Zhu
2016 J jnl
An Incremental-and-Static-Combined Scheme for Matrix-Factorization-Based Collaborative Filtering.
IEEE Trans Autom. Sci. Eng.
Xin Luo, MengChu Zhou, Hareton Leung, Yunni Xia, Qingsheng Zhu, Zhu-Hong You, Shuai Li
2016 J jnl
Construction of reliable protein-protein interaction networks using weighted sparse representation based classifier with pseudo substitution matrix representation features.
Neurocomputing
Yu-An Huang, Zhu-Hong You, Xiao Li, Xing Chen, Pengwei Hu, Shuai Li, Xin Luo
2016 J jnl
Improved protein-protein interactions prediction via weighted sparse representation model combining continuous wavelet descriptor and PseAA composition.
BMC Syst. Biol.
Yu-An Huang, Zhu-Hong You, Xing Chen, Guiying Yan
2016 J jnl
Inverse-Free Extreme Learning Machine With Optimal Information Updating.
IEEE Trans. Cybern.
Shuai Li, Zhu-Hong You, Hongliang Guo, Xin Luo, Zhong-Qiu Zhao
2016 B conf
Large-scale prediction of drug-target interactions from deep representations.
IJCNN
Peng-Wei, Keith C. C. Chan, Zhu-Hong You
2016 J jnl
Sequence-based prediction of protein-protein interactions using weighted sparse representation model combined with global encoding.
BMC Bioinform.
Yu-An Huang, Zhu-Hong You, Xing Chen, Keith C. C. Chan, Xin Luo
2015 — conf
Detection of Protein-Protein Interactions from Amino Acid Sequences Using a Rotation Forest Model with a Novel PR-LPQ Descriptor.
ICIC (3)
Leon Wong, Zhu-Hong You, Shuai Li, Yu-An Huang, Gang Liu
2015 — conf
Predicting Protein-Protein Interactions from Amino Acid Sequences Using SaE-ELM Combined with Continuous Wavelet Descriptor and PseAA Composition.
ICIC (2)
Yu-An Huang, Zhu-Hong You, Jianqiang Li, Leon Wong, Shubin Cai
2014 J jnl
A MapReduce based parallel SVM for large-scale predicting protein-protein interactions.
Neurocomputing
Zhu-Hong You, Jian-Zhong Yu, Lin Zhu, Shuai Li, Zhenkun Wen
2014 — conf
Identifying Spurious Interactions in the Protein-Protein Interaction Networks Using Local Similarity Preserving Embedding.
ISBRA
Lin Zhu, Zhu-Hong You, De-Shuang Huang
2014 J jnl
Orthogonal locally discriminant spline embedding for plant leaf recognition.
Comput. Vis. Image Underst.
Ying-Ke Lei, Ji-Wei Zou, Tianbao Dong, Zhu-Hong You, Yuan Yuan, Yihua Hu
2014 J jnl
Prediction of protein-protein interactions from amino acid sequences using a novel multi-scale continuous and discontinuous feature set.
BMC Bioinform.
Zhu-Hong You, Lin Zhu, Chun-Hou Zheng, Hongjie Yu, Suping Deng, Zhen Ji
2014 B conf
Using Chou's amphiphilic Pseudo-Amino Acid Composition and Extreme Learning Machine for prediction of Protein-protein interactions.
IJCNN
Qiao-Ying Huang, Zhu-Hong You, Shuai Li, Zexuan Zhu
2013 J jnl
Increasing reliability of protein interactome by fast manifold embedding.
Pattern Recognit. Lett.
Ying-Ke Lei, Zhu-Hong You, Tianbao Dong, Yun-Xiao Jiang, Jun-an Yang
2013 J jnl
Increasing the reliability of protein-protein interaction networks via non-convex semantic embedding.
Neurocomputing
Lin Zhu, Zhu-Hong You, De-Shuang Huang
2013 — conf
Prediction of protein-protein interactions from amino acid sequences using extreme learning machine combined with auto covariance descriptor.
Memetic Computing
Zhu-Hong You, Liping Li, Zhen Ji, Min Li, Sen Guo
2013 J jnl
Prediction of protein-protein interactions from amino acid sequences with ensemble extreme learning machines and principal component analysis.
BMC Bioinform.
Zhu-Hong You, Ying-Ke Lei, Lin Zhu, Junfeng Xia, Bing Wang
2013 — conf
Research on Signaling Pathways Reconstruction by Integrating High Content RNAi Screening and Functional Gene Network.
ICIC (2)
Zhu-Hong You, Zhong Ming, Liping Li, Qiao-Ying Huang
2010 — conf
Comparison of DNA Truncated Barcodes and Full-Barcodes for Species Identification.
ICIC (2)
Hongjie Yu, Zhu-Hong You
2010 — conf
Increasing Reliability of Protein Interactome by Combining Heterogeneous Data Sources with Weighted Network Topological Metrics.
ICIC (1)
Zhu-Hong You, Liping Li, Hongjie Yu, Sanfeng Chen, Shu-Lin Wang