Zhongying Zhao

18 papers A* 1B 2Misc 1Journal 14
YearRankTypeTitle / Venue / Authors
2025 J jnl
An effective method for quantification, visualization, and analysis of 3D cell shape during early embryogenesis.
Quant. Biol.
Zelin Li, Zhaoke Huang, Jianfeng Cao, Guoye Guan, Zhongying Zhao, Hong Yan
2025 A* conf
Volume Tells: Dual Cycle-Consistent Diffusion for 3D Fluorescence Microscopy De-noising and Super-Resolution.
CVPR
Zelin Li, Chenwei Wang, Zhaoke Huang, Yiming Ma, Cunming Zhao, Zhongying Zhao, Hong Yan
2025 J jnl
Volume Tells: Dual Cycle-Consistent Diffusion for 3D Fluorescence Microscopy De-noising and Super-Resolution.
CoRR
Zelin Li, Chenwei Wang, Zhaoke Huang, Yiming Ma, Cunming Zhao, Zhongying Zhao, Hong Yan
2024 J jnl
CShaperApp: Segmenting and analyzing cellular morphologies of the developing
Quant. Biol.
Jianfeng Cao, Lihan Hu, Guoye Guan, Zelin Li, Zhongying Zhao, Chao Tang, Hong Yan
2024 J jnl
Deep learning-based enhancement of fluorescence labeling for accurate cell lineage tracing during embryogenesis.
Bioinform.
Zelin Li, Dongying Xie, Yiming Ma, Cunming Zhao, Sicheng You, Hong Yan, Zhongying Zhao
2024 B conf
Directional And Topological Transformer With Topology Priors For 4D Cellular Image Segmentation.
ICIP
Zelin Li, Zhaoke Huang, Zhen Zhu, Sicheng You, Zhongying Zhao, Hong Yan
2022 J jnl
Computable early Caenorhabditis elegans embryo with a phase field model.
PLoS Comput. Biol.
Xiangyu Kuang, Guoye Guan, Ming-Kin Wong, Lu-Yan Chan, Zhongying Zhao, Chao Tang, Lei Zhang
2019 J jnl
3DMMS: robust 3D Membrane Morphological Segmentation of C. elegans embryo.
BMC Bioinform.
Jianfeng Cao, Ming-Kin Wong, Zhongying Zhao, Hong Yan
2019 J jnl
Bayesian Detection of Abnormal Asynchrony of Division Between Sister Cells in Mutant
J. Comput. Biol.
Wei Liang, Yuxiao Yang, Yusi Fang, Zhongying Zhao, Jie Hu
2018 B conf
Accurate Cell Segmentation Based on Biological Morphology Features.
SMC
Jianfeng Cao, Zhongying Zhao, Hong Yan
2017 J jnl
Inference of cellular level signaling networks using single-cell gene expression data in Caenorhabditis elegans reveals mechanisms of cell fate specification.
Bioinform.
Xiao-Tai Huang, Yuan Zhu, Leanne Lai-Hang Chan, Zhongying Zhao, Hong Yan
2017 J jnl
PlaMoM: a comprehensive database compiles plant mobile macromolecules.
Nucleic Acids Res.
Daogang Guan, Bin Yan, Christoph J. Thieme, Jingmin Hua, Hailong Zhu, Kenneth R. Boheler, Zhongying Zhao, Friedrich Kragler, Yiji Xia, Shoudong Zhang
2016 J jnl
A Probabilistic Relaxation Labeling (PRL) Based Method for C. elegans Cell Tracking in Microscopic Image Sequences.
IEEE J. Sel. Top. Signal Process.
Long Chen, Zhongying Zhao, Hong Yan
2015 Misc conf
C. elegans cell matching and tracking in a 4D imageing system.
ICASSP
Long Chen, Zhongying Zhao, Hong Yan
2014 J jnl
CMGRN: a web server for constructing multilevel gene regulatory networks using ChIP-seq and gene expression data.
Bioinform.
Daogang Guan, Jiaofang Shao, Youping Deng, Panwen Wang, Zhongying Zhao, Yan Liang, Junwen Wang, Bin Yan
2014 J jnl
DDGni: Dynamic delay gene-network inference from high-temporal data using gapped local alignment.
Bioinform.
Hari Krishna Yalamanchili, Bin Yan, Mulin Jun Li, Jing Qin, Zhongying Zhao, Francis Y. L. Chin, Junwen Wang
2014 J jnl
PTHGRN: unraveling post-translational hierarchical gene regulatory networks using PPI, ChIP-seq and gene expression data.
Nucleic Acids Res.
Daogang Guan, Jiaofang Shao, Zhongying Zhao, Panwen Wang, Jing Qin, Youping Deng, Kenneth R. Boheler, Junwen Wang, Bin Yan
2013 J jnl
A novel cell nuclei segmentation method for 3D C. elegans embryonic time-lapse images.
BMC Bioinform.
Long Chen, Leanne Lai Chan, Zhongying Zhao, Hong Yan