Zhiming Dai

31 papers A* 2Journal 20Unranked 9
YearRankTypeTitle / Venue / Authors
2026 J jnl
EviAgent: Evidence-Driven Agent for Radiology Report Generation.
CoRR
Tuoshi Qi, Shenshen Bu, Yingfei Xiang, Zhiming Dai
2026 A* conf
Informal Embodied Auditing: Exploring Facial Emotion AI (FEAI) through Community Workshops.
CHI
Xingyu Li, Alexandra Teixeira Riggs, Zhiming Dai, Crystal Byrd Farmer, Kalia G. Morrison, Noura Howell
2025 — conf
ACID: Improving Ambiguous Cell Type Annotation in Spatial Transcriptomics.
BIBM
Yang Zhang, Zhipeng Zhou, Zhiming Dai
2025 — conf
Augmenting Continual Learning of Diseases with LLM-Generated Visual Concepts.
BIBM
Jiantao Tan, Peixian Ma, Zhiming Dai, Kanghao Chen, Ruixuan Wang
2025 J jnl
Augmenting Continual Learning of Diseases with LLM-Generated Visual Concepts.
CoRR
Jiantao Tan, Peixian Ma, Kanghao Chen, Zhiming Dai, Ruixuan Wang
2025 J jnl
scE
CoRR
Hegang Chen, Yuyin Lu, Zhiming Dai, Fu Lee Wang, Qing Li, Yanghui Rao
2024 J jnl
A Multiagent Meta-Based Task Offloading Strategy for Mobile-Edge Computing.
IEEE Trans. Cogn. Dev. Syst.
Weichao Ding, Fei Luo, Chunhua Gu, Zhiming Dai, Haifeng Lu
2024 J jnl
Comprehensive single-cell RNA-seq analysis using deep interpretable generative modeling guided by biological hierarchy knowledge.
Briefings Bioinform.
Hegang Chen, Yuyin Lu, Zhiming Dai, Yuedong Yang, Qing Li, Yanghui Rao
2024 J jnl
Detecting novel cell type in single-cell chromatin accessibility data via open-set domain adaptation.
Briefings Bioinform.
Yuefan Lin, Zixiang Pan, Yuansong Zeng, Yuedong Yang, Zhiming Dai
2024 — conf
Dynamic Knowledge Prompt for Chest X-ray Report Generation.
LREC/COLING
Shenshen Bu, Yujie Song, Taiji Li, Zhiming Dai
2024 — conf
Insights into Secondary Mutational Genes in Knockout Strains.
ICBBT
Yuefan Lin, Zhiming Dai
2024 A* conf
Instance-level Expert Knowledge and Aggregate Discriminative Attention for Radiology Report Generation.
CVPR
Shenshen Bu, Taiji Li, Yuedong Yang, Zhiming Dai
2024 J jnl
Subgraph extraction and graph representation learning for single cell Hi-C imputation and clustering.
Briefings Bioinform.
Jiahao Zheng, Yuedong Yang, Zhiming Dai
2023 J jnl
Benchmarking deep learning methods for predicting CRISPR/Cas9 sgRNA on- and off-target activities.
Briefings Bioinform.
Guishan Zhang, Ye Luo, Xianhua Dai, Zhiming Dai
2023 — conf
CSIFNet: Deep multimodal network based on cellular spatial information fusion for survival prediction.
BIBM
Siqi Xiao, Zhiming Dai
2023 — conf
Enhancing Medical Report Generation in Multi-Slice Fusion Scenarios.
BIBM
Shenshen Bu, Taiji Li, Zhiming Dai
2023 — conf
Transcription Factor-target Relationships Complicated by Knockout Analysis.
ICBBT
Zhiming Dai
2020 J jnl
SANPolyA: a deep learning method for identifying Poly(A) signals.
Bioinform.
Haitao Yu, Zhiming Dai
2017 J jnl
pgRNAFinder: a web-based tool to design distance independent paired-gRNA.
Bioinform.
Yuanyan Xiong, Xiaowei Xie, Yanzhi Wang, Wenbin Ma, Puping Liang, Songyang Zhou, Zhiming Dai
2016 J jnl
CCSI: a database providing chromatin-chromatin spatial interaction information.
Database J. Biol. Databases Curation
Xiaowei Xie, Wenbin Ma, Songyang Zhou, Zhenhua Luo, Junfeng Huang, Zhiming Dai, Yuanyan Xiong
2015 J jnl
TeloPIN: a database of telomeric proteins interaction network in mammalian cells.
Database J. Biol. Databases Curation
Zhenhua Luo, Zhiming Dai, Xiaowei Xie, Xuyang Feng, Dan Liu, Songyang Zhou, Yuanyan Xiong
2013 J jnl
BGDB: a database of bivalent genes.
Database J. Biol. Databases Curation
Qingyan Li, Shuabin Lian, Zhiming Dai, Qian Xiang, Xianhua Dai
2012 J jnl
Antisense transcription is coupled to nucleosome occupancy in sense promoters.
Bioinform.
Zhiming Dai, Xianhua Dai
2011 J jnl
Gene Expression Divergence is Coupled to Evolution of DNA Structure in Coding Regions.
PLoS Comput. Biol.
Zhiming Dai, Xianhua Dai
2011 J jnl
Genome-wide DNA sequence polymorphisms facilitate nucleosome positioning in yeast.
Bioinform.
Zhiming Dai, Xianhua Dai, Qian Xiang
2010 J jnl
A simulation model for nucleosome distribution in the yeast genome based on integrated cross-platform positioning datasets.
Math. Comput. Model.
Jihua Feng, Xianhua Dai, Zhiming Dai, Qian Xiang, Jiang Wang, Yangyang Deng, Caisheng He
2010 — conf
Insights into the combinatorial effects of histone modifications in yeast using association rule mining.
BIC-TA
Jiang Wang, Xianhua Dai, Qian Xiang, Yangyang Deng, Jihua Feng, Zhiming Dai, Caisheng He
2009 J jnl
Nucleosomal Context of Binding Sites Influences Transcription Factor Binding Affinity and Gene Regulation.
Genom. Proteom. Bioinform.
Zhiming Dai, Xianhua Dai, Qian Xiang, Jihua Feng
2009 J jnl
Transcriptional interaction-assisted identification of dynamic nucleosome positioning.
BMC Bioinform.
Zhiming Dai, Xianhua Dai, Qian Xiang, Jihua Feng, Yangyang Deng, Jiang Wang, Caisheng He
2008 J jnl
Missing value imputation for microarray gene expression data using histone acetylation information.
BMC Bioinform.
Qian Xiang, Xianhua Dai, Yangyang Deng, Caisheng He, Jiang Wang, Jihua Feng, Zhiming Dai
2006 — conf
Identifying Transcription Factor Binding Sites Based on a Neural Network.
ISNN (2)
Zhiming Dai, Xianhua Dai, Jiang Wang