Zhengchang Su

22 papers C 1Misc 1Journal 9Unranked 10
YearRankTypeTitle / Venue / Authors
2022 J jnl
PCRMS: a database of predicted cis-regulatory modules and constituent transcription factor binding sites in genomes.
Database J. Biol. Databases Curation
Pengyu Ni, Zhengchang Su
2021 J jnl
Clustering single-cell RNA-seq data by rank constrained similarity learning.
Bioinform.
Qinglin Mei, Guojun Li, Zhengchang Su
2020 J jnl
RecBic: a fast and accurate algorithm recognizing trend-preserving biclusters.
Bioinform.
Xiangyu Liu, Di Li, Juntao Liu, Zhengchang Su, Guojun Li
2019 J jnl
ProSampler: an ultrafast and accurate motif finder in large ChIP-seq datasets for combinatory motif discovery.
Bioinform.
Yang Li, Pengyu Ni, Shaoqiang Zhang, Guojun Li, Zhengchang Su
2015 J jnl
Identification of cell types from single-cell transcriptomes using a novel clustering method.
Bioinform.
Chen Xu, Zhengchang Su
2013 J jnl
SPIC: A novel similarity metric for comparing transcription factor binding site motifs based on information contents.
BMC Syst. Biol.
Shaoqiang Zhang, Xiguo Zhou, Chuanbin Du, Zhengchang Su
2012 — conf
A novel information contents based similarity metric for comparing TFBS motifs.
ISB
Shaoqiang Zhang, Lifen Jiang, Chuanbin Du, Zhengchang Su
2011 — conf
A Simulated Annealing Algorithm for Resource Allocation and Scheduling with Precedence Constraints in the GLECLUBS/eGLECLUBS Pipelines.
CSE
Shaoqiang Zhang, Huazhi Sun, Guojun Li, Zhengchang Su
2011 J jnl
MotifClick: prediction of cis-regulatory binding sites via merging cliques.
BMC Bioinform.
Shaoqiang Zhang, Shan Li, Meng Niu, Phuc T. Pham, Zhengchang Su
2010 J jnl
Simultaneous prediction of transcription factor binding sites in a group of prokaryotic genomes.
BMC Bioinform.
Shaoqiang Zhang, Shan Li, Phuc T. Pham, Zhengchang Su
2006 J jnl
Mapping of orthologous genes in the context of biological pathways: An application of integer programming.
Proc. Natl. Acad. Sci. USA
Fenglou Mao, Zhengchang Su, Victor Olman, PhuongAn Dam, Zhijie Liu, Ying Xu
2006 Misc conf
Understanding microbial genomic structures and applications to biological pathway inference.
GrC
Zhengchang Su, Fenglou Mao, Hongwei Wu, PhuongAn Dam, Xin Chen, Tao Jiang, Victor Olman, Brian Palenik, Ying Xu
2005 — ch.
Computational Reconstruction of the carbon fixation pathway in Synechococcus SP. Wh 8102.
Advances in Bioinformatics and Its Applications
PhuongAn Dam, Zhengchang Su, Victor Olman, Ying Xu
2004 — conf
A Knowledge Base for Computational Pathway Reconstruction.
CSB
Peng Wang, Zhengchang Su, PhuongAn Dam, Ying Xu
2004 — conf
CUBIC: Search for Binding Sites.
CSB
Victor Olman, Jizhu Lu, PhuongAn Dam, Zhengchang Su, Ying Xu
2004 — conf
Computational Construction of Nitrogen Assimilation Pathway in Cyanobacteria Synechococcus sp. WH8102.
CSB
Zhengchang Su, PhuongAn Dam, X. Chen, Victor Olman, Tao Jiang, Ying Xu
2004 C conf
Computational Inference of Transcription Regulation and Response Networks in Synechococcus sp. WH8102.
BIBE
Zhengchang Su, PhuongAn Dam, Victor Olman, Ying Xu
2004 — conf
In Silico Construction of the Carbon Fixation Pathway in Synechococcus sp. WH8102.
CSB
PhuongAn Dam, Zhengchang Su, Victor Olman, Ying Xu
2004 — conf
Mapping of Microbial Pathways through Constrained Mapping of Orthologous Genes.
CSB
Victor Olman, Hanchuan Peng, Zhengchang Su, Ying Xu
2004 — conf
Pathway Mapping with Operon Information: An Integer-Programming Method.
CSB
Fenglou Mao, Zhengchang Su, Victor Olman, David Chuang, Ying Xu
2004 — conf
Structural Analysis of FGFR1 Kinase Activation through Molecular Dynamics Simulation.
CSB
Peng Wang, Zhengchang Su, Jun-tao Guo, Ying Xu
2003 — conf
Computational Inference of Regulatory Pathways in Microbes.
CSB
Zhengchang Su, PhuongAn Dam, Xin Chen, Victor Olman, Tao Jiang, Brian Palenik, Ying Xu