Zhang-Zhi Hu

28 papers A* 1C 1Misc 1Journal 18Unranked 5
YearRankTypeTitle / Venue / Authors
2011 J jnl
dbOGAP - An Integrated Bioinformatics Resource for Protein O-GlcNAcylation.
BMC Bioinform.
Jinlian Wang, Manabu Torii, Hongfang Liu, Gerald W. Hart, Zhang-Zhi Hu
2010 J jnl
Document classification for mining host pathogen protein-protein interactions.
Artif. Intell. Medicine
Lanlan Yin, Guixian Xu, Manabu Torii, Zhendong Niu, José M. Maisog, Cathy H. Wu, Zhang-Zhi Hu, Hongfang Liu
2010 — conf
Evaluating gene/protein name tagging and mapping for article retrieval.
Semantic Mining in Biomedicine
Chong Min Lee, Manabu Torii, Zhang-Zhi Hu, Yi-Ting Tsai, Jinesh Shah, Hongfang Liu
2009 C conf
Generating Abstract Networks Using Multi-relational Biological Data.
IV
Paul Caravelli, Mitchell Beard, Brian Gopalan, Lisa Singh, Zhang-Zhi Hu
2009 — ch.
Information Extraction of Protein Phosphorylation from Biomedical Literature.
Information Retrieval in Biomedicine
Meenakshi Narayanaswamy, K. E. Ravikumar, Zhang-Zhi Hu, K. Vijay-Shanker, Cathy H. Wu
2009 J jnl
Research Paper: BioTagger-GM: A Gene/Protein Name Recognition System.
J. Am. Medical Informatics Assoc.
Manabu Torii, Zhang-Zhi Hu, Cathy H. Wu, Hongfang Liu
2009 Misc conf
Support Vector Machine-Based Mucin-Type O-linked Glycosylation Site Prediction Using Enhanced Sequence Feature Encoding.
AMIA
Manabu Torii, Hongfang Liu, Zhang-Zhi Hu
2008 — ch.
Bioinformatic Databases.
Wiley Encyclopedia of Computer Science and Engineering
Katherine G. Herbert, Junilda Spirollari, Jason Tsong-Li Wang, William H. Piel, John D. Westbrook, Winona C. Barker, Zhang-Zhi Hu, Cathy H. Wu
2008 — conf
Document Classification for Mining Host Pathogen Protein-Protein Interactions.
BIBM
Guixian Xu, Lanlan Yin, Manabu Torii, Zhendong Niu, Cathy H. Wu, Zhang-Zhi Hu, Hongfang Liu
2008 — conf
Learning from Positive and Unlabeled Documents for Retrieval of Bacterial Protein-Protein Interaction Literature.
BioLINK@ISMB/ECCB
Hongfang Liu, Manabu Torii, Guixian Xu, Zhang-Zhi Hu, Johannes Goll
2008 — conf
iProLINK: A Framework for Linking Text Mining with Ontology and Systems Biology.
BIBM
Zhang-Zhi Hu, K. Bretonnel Cohen, Lynette Hirschman, Alfonso Valencia, Hongfang Liu, Michelle G. Giglio, Cathy H. Wu
2007 J jnl
A comparison study on algorithms of detecting long forms for short forms in biomedical text.
BMC Bioinform.
Manabu Torii, Zhang-Zhi Hu, Min Song, Cathy H. Wu, Hongfang Liu
2007 J jnl
Dependence network modeling for biomarker identification.
Bioinform.
Peng Qiu, Z. Jane Wang, K. J. Ray Liu, Zhang-Zhi Hu, Cathy H. Wu
2007 J jnl
Framework for a Protein Ontology.
BMC Bioinform.
Darren A. Natale, Cecilia N. Arighi, Winona C. Barker, Judith A. Blake, Ti-Cheng Chang, Zhang-Zhi Hu, Hongfang Liu, Barry Smith, Cathy H. Wu
2007 — conf
Mapping Gene/Protein Names in Free Text to Biomedical Databases.
ICDM Workshops
Hongfang Liu, Manabu Torii, Zhang-Zhi Hu, Cathy H. Wu
2006 J jnl
An online literature mining tool for protein phosphorylation.
Bioinform.
X. Yuan, Zhang-Zhi Hu, H. T. Wu, Manabu Torii, Meenakshi Narayanaswamy, K. E. Ravikumar, K. Vijay-Shanker, Cathy H. Wu
2006 J jnl
BioThesaurus: a web-based thesaurus of protein and gene names.
Bioinform.
Hongfang Liu, Zhang-Zhi Hu, Jian Zhang, Cathy H. Wu
2006 J jnl
Research Paper: Quantitative Assessment of Dictionary-based Protein Named Entity Tagging.
J. Am. Medical Informatics Assoc.
Hongfang Liu, Zhang-Zhi Hu, Manabu Torii, Cathy H. Wu, Carol Friedman
2006 J jnl
Substring selection for biomedical document classification.
Bioinform.
Bo Han, Zoran Obradovic, Zhang-Zhi Hu, Cathy H. Wu, Slobodan Vucetic
2005 J jnl
DynGO: a tool for visualizing and mining of Gene Ontology and its associations.
BMC Bioinform.
Hongfang Liu, Zhang-Zhi Hu, Cathy H. Wu
2005 A* conf
Dynamically Generating a Protein Entity Dictionary Using Online Resources.
ACL
Hongfang Liu, Zhang-Zhi Hu, Cathy H. Wu
2005 J jnl
Literature mining and database annotation of protein phosphorylation using a rule-based system.
Bioinform.
Zhang-Zhi Hu, Meenakshi Narayanaswamy, K. E. Ravikumar, K. Vijay-Shanker, Cathy H. Wu
2004 J jnl
PIRSF: family classification system at the Protein Information Resource.
Nucleic Acids Res.
Cathy H. Wu, Anastasia N. Nikolskaya, Hongzhan Huang, Lai-Su L. Yeh, Darren A. Natale, Cholanayakanahalli R. Vinayaka, Zhang-Zhi Hu, Raja Mazumder, Sandeep Kumar, Panagiotis Kourtesis, Robert S. Ledley, Baris E. Suzek, Leslie Arminski, Yongxing Chen, Jian Zhang, Jorge Louie Cardenas, Sehee Chung, Jorge Castro-Alvear, Georgi Dinkov, Winona C. Barker
2004 J jnl
The PIR integrated protein databases and data retrieval system.
Data Sci. J.
Hongzhan Huang, Zhang-Zhi Hu, Baris E. Suzek, Cathy H. Wu
2004 J jnl
The iProClass integrated database for protein functional analysis.
Comput. Biol. Chem.
Cathy H. Wu, Hongzhan Huang, Anastasia N. Nikolskaya, Zhang-Zhi Hu, Winona C. Barker
2004 J jnl
iProLINK: an integrated protein resource for literature mining.
Comput. Biol. Chem.
Zhang-Zhi Hu, Inderjeet Mani, Vincent Hermoso, Hongfang Liu, Cathy H. Wu
2003 J jnl
The Protein Information Resource.
Nucleic Acids Res.
Cathy H. Wu, Lai-Su L. Yeh, Hongzhan Huang, Leslie Arminski, Jorge Castro-Alvear, Yongxing Chen, Zhang-Zhi Hu, Panagiotis Kourtesis, Robert S. Ledley, Baris E. Suzek, Cholanayakanahalli R. Vinayaka, Jian Zhang, Winona C. Barker
2002 J jnl
The Protein Information Resource: an integrated public resource of functional annotation of proteins.
Nucleic Acids Res.
Cathy H. Wu, Hongzhan Huang, Leslie Arminski, Jorge Castro-Alvear, Yongxing Chen, Zhang-Zhi Hu, Robert S. Ledley, Kali C. Lewis, Hans-Werner Mewes, Bruce C. Orcutt, Baris E. Suzek, Akira Tsugita, Cholanayakanahalli R. Vinayaka, Lai-Su L. Yeh, Jian Zhang, Winona C. Barker