Zanoni Dias

164 papers B 5C 9Misc 7Journal 70Unranked 72
YearRankTypeTitle / Venue / Authors
2026 C conf
A Comparative Study of Autoencoder Models on Latent Space Organization: An Evaluation with SVHN.
ICPRAM
Wilson Bagni Junior, Gabriel Bianchin de Oliveira, Hélio Pedrini, Zanoni Dias
2026 J jnl
Fair age prediction through ILP-based multi-attribute training subset selection.
Appl. Soft Comput.
Ana Paula dos Santos Dantas, Gabriel Bianchin de Oliveira, Hélio Pedrini, Cid C. de Souza, Zanoni Dias
2026 — conf
From Graphs to Images: Non-Parametric PPI Context Integration for Vision-Based Protein Function Prediction.
VISAPP (1)
Yeonatan Mauhnoom, Gabriel Bianchin de Oliveira, Hélio Pedrini, Zanoni Dias
2026 J jnl
Maximum alternating clean balanced cycle decomposition and applications in rearrangement distance problems.
J. Comb. Optim.
Gabriel Siqueira, Klairton Lima Brito, Alexsandro Oliveira Alexandrino, Andre Rodrigues Oliveira, Ulisses Dias, Zanoni Dias
2025 J jnl
Approximations for the Weighted Reversal, Transposition, and Indel Distance Problem with Intergenic Region Information.
CoRR
Gabriel Siqueira, Alexsandro Oliveira Alexandrino, Zanoni Dias
2025 — conf
Learning Weakly Supervised Semantic Segmentation Through Cross-Supervision and Contrasting of Pixel-Level Pseudo-Labels.
VISIGRAPP (3): VISAPP
Lucas David, Hélio Pedrini, Zanoni Dias
2025 J jnl
Partition Based Algorithms for Rearrangement Distances With Flexible Intergenic Regions.
IEEE Trans. Comput. Biol. Bioinform.
Gabriel Siqueira, Alexsandro Oliveira Alexandrino, Andre Rodrigues Oliveira, Géraldine Jean, Guillaume Fertin, Zanoni Dias
2025 J jnl
SUPERMAGOv2: Protein Function Prediction via Transformer Embeddings and Bitscore-Weighted Features.
IEEE Access
Gabriel Bianchin de Oliveira, Hélio Pedrini, Zanoni Dias
2025 J jnl
Scaling Up ESM2 Architectures for Long Protein Sequences Analysis: Long and Quantized Approaches.
CoRR
Gabriel Bianchin de Oliveira, Hélio Pedrini, Zanoni Dias
2024 J jnl
Assignment of orthologous genes in unbalanced genomes using cycle packing of adjacency graphs.
J. Heuristics
Gabriel Siqueira, Andre Rodrigues Oliveira, Alexsandro Oliveira Alexandrino, Géraldine Jean, Guillaume Fertin, Zanoni Dias
2024 — conf
Heuristics based on Adjacency Graph Packing for DCJ Distance Considering Intergenic Regions.
BSB
Gabriel Siqueira, Alexsandro Oliveira Alexandrino, Andre Rodrigues Oliveira, Zanoni Dias
2024 — conf
Integrating Transformers and AutoML for Protein Function Prediction.
EMBC
Gabriel Bianchin de Oliveira, Hélio Pedrini, Zanoni Dias
2024 — conf
Maximum Alternating Balanced Cycle Decomposition and Applications in Sorting by Intergenic Operations Problems.
RECOMB-CG
Klairton Lima Brito, Alexsandro Oliveira Alexandrino, Gabriel Siqueira, Andre Rodrigues Oliveira, Ulisses Dias, Zanoni Dias
2024 J jnl
P-NOC: Adversarial training of CAM generating networks for robust weakly supervised semantic segmentation priors.
J. Vis. Commun. Image Represent.
Lucas Oliveira David, Hélio Pedrini, Zanoni Dias
2024 J jnl
Rearrangement Distance Problems: An updated survey.
ACM Comput. Surv.
Andre Rodrigues Oliveira, Klairton Lima Brito, Alexsandro Oliveira Alexandrino, Gabriel Siqueira, Ulisses Dias, Zanoni Dias
2024 — conf
Scaling Up ESM2 Architectures for Long Protein Sequences Analysis: Long and Quantized Approaches.
BSB
Gabriel Bianchin de Oliveira, Hélio Pedrini, Zanoni Dias
2023 — conf
Adversarial Feature Hallucination in a Supervised Contrastive Space for Few-Shot Learning of Provenance in Paintings.
LA-CCI
Lucas David, Luis Liborio, Guilherme Paiva, Marianna Severo, Eduardo Valle, Hélio Pedrini, Zanoni Dias
2023 — conf
Algorithmic Fairness Applied to the Multi-Label Classification Problem.
VISIGRAPP (5: VISAPP)
Ana Paula dos Santos Dantas, Gabriel Bianchin de Oliveira, Daiane Mendes de Oliveira, Hélio Pedrini, Cid C. de Souza, Zanoni Dias
2023 — conf
Approximating Rearrangement Distances with Replicas and Flexible Intergenic Regions.
ISBRA
Gabriel Siqueira, Alexsandro Oliveira Alexandrino, Andre Rodrigues Oliveira, Géraldine Jean, Guillaume Fertin, Zanoni Dias
2023 J jnl
Approximation algorithms for sorting by k-cuts on signed permutations.
J. Comb. Optim.
Andre Rodrigues Oliveira, Alexsandro Oliveira Alexandrino, Géraldine Jean, Guillaume Fertin, Ulisses Dias, Zanoni Dias
2023 — conf
Block Interchange and Reversal Distance on Unbalanced Genomes.
BSB
Alexsandro Oliveira Alexandrino, Gabriel Siqueira, Klairton Lima Brito, Andre Rodrigues Oliveira, Ulisses Dias, Zanoni Dias
2023 J jnl
Genome Rearrangement Distance With a Flexible Intergenic Regions Aspect.
IEEE ACM Trans. Comput. Biol. Bioinform.
Klairton Lima Brito, Alexsandro Oliveira Alexandrino, Andre Rodrigues Oliveira, Ulisses Dias, Zanoni Dias
2023 J jnl
P-NOC: Adversarial CAM Generation for Weakly Supervised Semantic Segmentation.
CoRR
Lucas David, Hélio Pedrini, Zanoni Dias
2023 J jnl
Rearrangement distance with reversals, indels, and moves in intergenic regions on signed and unsigned permutations.
J. Bioinform. Comput. Biol.
Klairton Lima Brito, Andre Rodrigues Oliveira, Alexsandro Oliveira Alexandrino, Ulisses Dias, Zanoni Dias
2023 J jnl
Reversal and Indel Distance With Intergenic Region Information.
IEEE ACM Trans. Comput. Biol. Bioinform.
Alexsandro Oliveira Alexandrino, Klairton Lima Brito, Andre Rodrigues Oliveira, Ulisses Dias, Zanoni Dias
2023 J jnl
Reversal and Transposition Distance on Unbalanced Genomes Using Intergenic Information.
J. Comput. Biol.
Alexsandro Oliveira Alexandrino, Andre Rodrigues Oliveira, Géraldine Jean, Guillaume Fertin, Ulisses Dias, Zanoni Dias
2023 J jnl
Signed rearrangement distances considering repeated genes, intergenic regions, and indels.
J. Comb. Optim.
Gabriel Siqueira, Alexsandro Oliveira Alexandrino, Zanoni Dias
2023 — conf
Sleep-Wake Classification using Recurrence Plots from Smartwatch Accelerometer Data.
LA-CCI
Rebeca Padovani Ederli, Didier A. Vega-Oliveros, Aurea Soriano-Vargas, Anderson Rocha, Zanoni Dias
2023 J jnl
TEMPROT: protein function annotation using transformers embeddings and homology search.
BMC Bioinform.
Gabriel Bianchin de Oliveira, Hélio Pedrini, Zanoni Dias
2023 — conf
The Multi-attribute Fairer Cover Problem.
BRACIS (1)
Ana Paula dos Santos Dantas, Gabriel Bianchin de Oliveira, Hélio Pedrini, Cid C. de Souza, Zanoni Dias
2022 — conf
A 1.375-Approximation Algorithm for Sorting by Transpositions with Faster Running Time.
BSB
Alexsandro Oliveira Alexandrino, Klairton Lima Brito, Andre Rodrigues Oliveira, Ulisses Dias, Zanoni Dias
2022 — conf
A New Approach for the Reversal Distance with Indels and Moves in Intergenic Regions.
RECOMB-CG
Klairton Lima Brito, Andre Rodrigues Oliveira, Alexsandro Oliveira Alexandrino, Ulisses Dias, Zanoni Dias
2022 J jnl
A genetic programming approach for searching on nearest neighbors graphs.
Multim. Tools Appl.
Javier Alvaro Vargas Muñoz, Zanoni Dias, Ricardo da Silva Torres
2022 J jnl
A heuristic for the convex recoloring problem in graphs.
Int. Trans. Oper. Res.
Ana Paula dos Santos Dantas, Cid C. de Souza, Zanoni Dias
2022 J jnl
Algorithms for the Maximum Eulerian Cycle Decomposition Problem.
CoRR
Pedro Olímpio Pinheiro, Alexsandro Oliveira Alexandrino, Andre Rodrigues Oliveira, Cid C. de Souza, Zanoni Dias
2022 — conf
Bias Assessment in Medical Imaging Analysis: A Case Study on Retinal OCT Image Classification.
ICAART (3)
Gabriel Bianchin de Oliveira, Lucas David, Rafael Padilha, Ana Paula da Silva, Francine de Paula, Lucas Infante, Lucio Jorge, Patricia Xavier, Zanoni Dias
2022 — conf
Ensemble of Patches for COVID-19 X-Ray Image Classification.
ICAART (3)
Thiago Dong Chen, Gabriel Bianchin de Oliveira, Zanoni Dias
2022 J jnl
Labeled Cycle Graph for Transposition and Indel Distance.
J. Comput. Biol.
Alexsandro Oliveira Alexandrino, Andre Rodrigues Oliveira, Ulisses Dias, Zanoni Dias
2022 — conf
MinMax-CAM: Improving Focus of CAM-based Visualization Techniques in Multi-label Problems.
VISIGRAPP (4: VISAPP)
Lucas Oliveira David, Hélio Pedrini, Zanoni Dias
2022 — conf
MinMax-CAM: Increasing Precision of Explaining Maps by Contrasting Gradient Signals and Regularizing Kernel Usage.
VISIGRAPP (Revised Selected Papers)
Lucas David, Hélio Pedrini, Zanoni Dias
2022 J jnl
On the Complexity of Some Variations of Sorting by Transpositions.
CoRR
Alexsandro Oliveira Alexandrino, Andre Rodrigues Oliveira, Ulisses Dias, Zanoni Dias
2022 — conf
Prediction of Protein Molecular Functions Using Transformers.
ICAISC (2)
Felipe Lopes de Mello, Gabriel Bianchin de Oliveira, Hélio Pedrini, Zanoni Dias
2022 — conf
Protein Molecular Function Annotation Based on Transformer Embeddings.
BRACIS (2)
Gabriel Bianchin de Oliveira, Hélio Pedrini, Zanoni Dias
2022 — conf
Sorting by k-Cuts on Signed Permutations.
RECOMB-CG
Andre Rodrigues Oliveira, Alexsandro Oliveira Alexandrino, Géraldine Jean, Guillaume Fertin, Ulisses Dias, Zanoni Dias
2022 — conf
Transposition Distance Considering Intergenic Regions for Unbalanced Genomes.
ISBRA
Alexsandro Oliveira Alexandrino, Andre Rodrigues Oliveira, Géraldine Jean, Guillaume Fertin, Ulisses Dias, Zanoni Dias
2021 J jnl
An improved approximation algorithm for the reversal and transposition distance considering gene order and intergenic sizes.
Algorithms Mol. Biol.
Klairton Lima Brito, Andre Rodrigues Oliveira, Alexsandro Oliveira Alexandrino, Ulisses Dias, Zanoni Dias
2021 J jnl
Approximation Algorithms for Sorting λ-Permutations by λ-Operations.
Algorithms
Guilherme Henrique Santos Miranda, Alexsandro Oliveira Alexandrino, Carla Negri Lintzmayer, Zanoni Dias
2021 J jnl
Approximation algorithm for rearrangement distances considering repeated genes and intergenic regions.
Algorithms Mol. Biol.
Gabriel Siqueira, Alexsandro Oliveira Alexandrino, Andre Rodrigues Oliveira, Zanoni Dias
2021 — conf
Authentication of Vincent van Gogh's Work.
CAIP (2)
Lucas Oliveira David, Hélio Pedrini, Zanoni Dias, Anderson Rocha
2021 — conf
Connoisseur: Provenance Analysis in Paintings.
SSCI
Lucas Oliveira David, Hélio Pedrini, Zanoni Dias, Anderson Rocha
2021 C conf
Data-Augmented Emoji Approach to Sentiment Classification of Tweets.
CIARP
Tiago Martinho de Barros, Hélio Pedrini, Zanoni Dias
2021 — conf
Deep Learning-Based COVID-19 Diagnostics of Low-Quality CT Images.
BSB
Daniel Ferber, Felipe Vieira, João Dalben, Mariana Ferraz, Nicholas Sato, Gabriel Bianchin de Oliveira, Rafael Padilha, Zanoni Dias
2021 J jnl
Genome Rearrangement Distance with Reversals, Transpositions, and Indels.
J. Comput. Biol.
Alexsandro Oliveira Alexandrino, Andre Rodrigues Oliveira, Ulisses Dias, Zanoni Dias
2021 J jnl
Harnessing high-level concepts, visual, and auditory features for violence detection in videos.
J. Vis. Commun. Image Represent.
Bruno Malveira Peixoto, Bahram Lavi, Zanoni Dias, Anderson Rocha
2021 — conf
Heuristics for Cycle Packing of Adjacency Graphs for Genomes with Repeated Genes.
BSB
Gabriel Siqueira, Andre Rodrigues Oliveira, Alexsandro Oliveira Alexandrino, Zanoni Dias
2021 J jnl
Heuristics for Genome Rearrangement Distance With Replicated Genes.
IEEE ACM Trans. Comput. Biol. Bioinform.
Gabriel Siqueira, Klairton Lima Brito, Ulisses Dias, Zanoni Dias
2021 J jnl
Incorporating intergenic regions into reversal and transposition distances with indels.
J. Bioinform. Comput. Biol.
Alexsandro Oliveira Alexandrino, Andre Rodrigues Oliveira, Ulisses Dias, Zanoni Dias
2021 J jnl
Length-weighted λ-rearrangement distance.
J. Comb. Optim.
Alexsandro Oliveira Alexandrino, Guilherme Henrique Santos Miranda, Carla Negri Lintzmayer, Zanoni Dias
2021 Misc conf
Leveraging emoji to improve sentiment classification of tweets.
SAC
Tiago Martinho de Barros, Hélio Pedrini, Zanoni Dias
2021 — conf
MMEC: Multi-Modal Ensemble Classifier for Protein Secondary Structure Prediction.
CAIP (1)
Gabriel Bianchin de Oliveira, Hélio Pedrini, Zanoni Dias
2021 J jnl
Manifold Learning for Real-World Event Understanding.
IEEE Trans. Inf. Forensics Secur.
Caroline Mazini Rodrigues, Aurea Soriano-Vargas, Bahram Lavi, Anderson Rocha, Zanoni Dias
2021 Misc conf
Protein secondary structure prediction based on fusion of machine learning classifiers.
SAC
Gabriel Bianchin de Oliveira, Hélio Pedrini, Zanoni Dias
2021 — conf
Reversal Distance on Genomes with Different Gene Content and Intergenic Regions Information.
AlCoB
Alexsandro Oliveira Alexandrino, Klairton Lima Brito, Andre Rodrigues Oliveira, Ulisses Dias, Zanoni Dias
2021 C conf
Reversal and Transposition Distance of Genomes Considering Flexible Intergenic Regions.
LAGOS
Klairton Lima Brito, Andre Rodrigues Oliveira, Alexsandro Oliveira Alexandrino, Ulisses Dias, Zanoni Dias
2021 — conf
Reversals Distance Considering Flexible Intergenic Regions Sizes.
AlCoB
Klairton Lima Brito, Alexsandro Oliveira Alexandrino, Andre Rodrigues Oliveira, Ulisses Dias, Zanoni Dias
2021 J jnl
Reversals and transpositions distance with proportion restriction.
J. Bioinform. Comput. Biol.
Klairton Lima Brito, Alexsandro Oliveira Alexandrino, Andre Rodrigues Oliveira, Ulisses Dias, Zanoni Dias
2021 J jnl
Sorting Permutations by Intergenic Operations.
IEEE ACM Trans. Comput. Biol. Bioinform.
Andre Rodrigues Oliveira, Géraldine Jean, Guillaume Fertin, Klairton Lima Brito, Ulisses Dias, Zanoni Dias
2021 J jnl
Sorting Signed Permutations by Intergenic Reversals.
IEEE ACM Trans. Comput. Biol. Bioinform.
Andre Rodrigues Oliveira, Géraldine Jean, Guillaume Fertin, Klairton Lima Brito, Laurent Bulteau, Ulisses Dias, Zanoni Dias
2020 — conf
A 3.5-Approximation Algorithm for Sorting by Intergenic Transpositions.
AlCoB
Andre Rodrigues Oliveira, Géraldine Jean, Guillaume Fertin, Klairton Lima Brito, Ulisses Dias, Zanoni Dias
2020 — conf
COVID-19 X-ray Image Diagnostic with Deep Neural Networks.
BSB
Gabriel Bianchin de Oliveira, Rafael Padilha, André Dorte, Luis Cereda, Luiz Miyazaki, Maurício Lopes, Zanoni Dias
2020 — conf
Classification of Musculoskeletal Abnormalities with Convolutional Neural Networks.
BSB
Guilherme Tiaki Sassai Sato, Leodécio Braz da Silva Segundo, Zanoni Dias
2020 — conf
DuaLAnet: Dual Lesion Attention Network for Thoracic Disease Classification in Chest X-Rays.
IWSSIP
Vinicius Teixeira, Leodécio Braz, Hélio Pedrini, Zanoni Dias
2020 — conf
Ensemble of Bidirectional Recurrent Networks and Random Forests for Protein Secondary Structure Prediction.
IWSSIP
Gabriel Bianchin de Oliveira, Hélio Pedrini, Zanoni Dias
2020 J jnl
Forensic Event Analysis: From Seemingly Unrelated Data to Understanding.
IEEE Secur. Priv.
Rafael Padilha, Caroline Mazini Rodrigues, Fernanda A. Andaló, Gabriel Bertocco, Zanoni Dias, Anderson Rocha
2020 — conf
Fusion of BLAST and Ensemble of Classifiers for Protein Secondary Structure Prediction.
SIBGRAPI
Gabriel Bianchin de Oliveira, Hélio Pedrini, Zanoni Dias
2020 — conf
Heuristics for Breakpoint Graph Decomposition with Applications in Genome Rearrangement Problems.
BSB
Pedro Olímpio Pinheiro, Alexsandro Oliveira Alexandrino, Andre Rodrigues Oliveira, Cid Carvalho de Souza, Zanoni Dias
2020 — conf
Heuristics for Reversal Distance Between Genomes with Duplicated Genes.
AlCoB
Gabriel Siqueira, Klairton Lima Brito, Ulisses Dias, Zanoni Dias
2020 J jnl
Heuristics for the Reversal and Transposition Distance Problem.
IEEE ACM Trans. Comput. Biol. Bioinform.
Klairton Lima Brito, Andre Rodrigues Oliveira, Ulisses Dias, Zanoni Dias
2020 — conf
ImTeNet: Image-Text Classification Network for Abnormality Detection and Automatic Reporting on Musculoskeletal Radiographs.
BSB
Leodécio Braz, Vinicius Teixeira, Hélio Pedrini, Zanoni Dias
2020 Misc conf
Multimodal Violence Detection in Videos.
ICASSP
Bruno Peixoto, Bahram Lavi, Paolo Bestagini, Zanoni Dias, Anderson Rocha
2020 J jnl
On the Complexity of Some Variations of Sorting by Transpositions.
J. Univers. Comput. Sci.
Alexsandro Oliveira Alexandrino, Andre Rodrigues Oliveira, Ulisses Dias, Zanoni Dias
2020 J jnl
Sorting by Genome Rearrangements on Both Gene Order and Intergenic Sizes.
J. Comput. Biol.
Klairton Lima Brito, Géraldine Jean, Guillaume Fertin, Andre Rodrigues Oliveira, Ulisses Dias, Zanoni Dias
2020 — conf
Sorting by Reversals and Transpositions with Proportion Restriction.
BSB
Klairton Lima Brito, Alexsandro Oliveira Alexandrino, Andre Rodrigues Oliveira, Ulisses Dias, Zanoni Dias
2020 J jnl
Sorting permutations by fragmentation-weighted operations.
J. Bioinform. Comput. Biol.
Alexsandro Oliveira Alexandrino, Carla Negri Lintzmayer, Zanoni Dias
2019 C conf
A GRASP for the Convex Recoloring Problem in Graphs.
LAGOS
Ana Paula dos Santos Dantas, Cid Carvalho de Souza, Zanoni Dias
2019 B conf
A Genetic Programming Approach for Searching on Nearest Neighbors Graphs.
ICMR
Javier Alvaro Vargas Muñoz, Zanoni Dias, Ricardo da Silva Torres
2019 C conf
Approximation Algorithms for Sorting Permutations by Length-Weighted Short Rearrangements.
LAGOS
Alexsandro Oliveira Alexandrino, Guilherme Henrique Santos Miranda, Carla Negri Lintzmayer, Zanoni Dias
2019 — conf
Block-Interchange Distance Considering Intergenic Regions.
BSB
Ulisses Dias, Andre Rodrigues Oliveira, Klairton Lima Brito, Zanoni Dias
2019 J jnl
Hierarchical Clustering-Based Graphs for Large Scale Approximate Nearest Neighbor Search.
Pattern Recognit.
Javier Alvaro Vargas Muñoz, Marcos André Gonçalves, Zanoni Dias, Ricardo da Silva Torres
2019 — conf
Image Semantic Representation for Event Understanding.
WIFS
Caroline Mazini Rodrigues, Luís A. M. Pereira, Anderson Rocha, Zanoni Dias
2019 J jnl
On the Complexity of Sorting by Reversals and Transpositions Problems.
J. Comput. Biol.
Andre Rodrigues Oliveira, Klairton Lima Brito, Ulisses Dias, Zanoni Dias
2019 J jnl
Sorting Permutations by λ-Operations.
J. Univers. Comput. Sci.
Guilherme Henrique Santos Miranda, Carla Negri Lintzmayer, Zanoni Dias
2019 — conf
Sorting by Reversals, Transpositions, and Indels on Both Gene Order and Intergenic Sizes.
ISBRA
Klairton Lima Brito, Géraldine Jean, Guillaume Fertin, Andre Rodrigues Oliveira, Ulisses Dias, Zanoni Dias
2019 J jnl
Sorting by Weighted Reversals and Transpositions.
J. Comput. Biol.
Andre Rodrigues Oliveira, Klairton Lima Brito, Zanoni Dias, Ulisses Dias
2019 J jnl
Super short operations on both gene order and intergenic sizes.
Algorithms Mol. Biol.
Andre Rodrigues Oliveira, Géraldine Jean, Guillaume Fertin, Ulisses Dias, Zanoni Dias
2019 Misc conf
Toward Subjective Violence Detection in Videos.
ICASSP
Bruno Peixoto, Bahram Lavi, João Paulo Pereira Martin, Sandra Avila, Zanoni Dias, Anderson Rocha
2018 J jnl
A GRASP-Based Heuristic for the Sorting by Length-Weighted Inversions Problem.
IEEE ACM Trans. Comput. Biol. Bioinform.
Thiago da Silva Arruda, Ulisses Dias, Zanoni Dias
2018 — conf
Approximation Algorithms for Sorting Permutations by Fragmentation-Weighted Operations.
AlCoB
Alexsandro Oliveira Alexandrino, Carla Negri Lintzmayer, Zanoni Dias
2018 B conf
Breaking down violence: A deep-learning strategy to model and classify violence in videos.
ARES
Bruno Malveira Peixoto, Sandra Avila, Zanoni Dias, Anderson Rocha
2018 — conf
Heuristics for the Sorting Signed Permutations by Reversals and Transpositions Problem.
AlCoB
Klairton Lima Brito, Andre Rodrigues Oliveira, Ulisses Dias, Zanoni Dias
2018 — conf
Sorting Permutations by Limited-Size Operations.
AlCoB
Guilherme Henrique Santos Miranda, Carla Negri Lintzmayer, Zanoni Dias
2018 — conf
Sorting by Weighted Reversals and Transpositions.
BSB
Andre Rodrigues Oliveira, Klairton Lima Brito, Zanoni Dias, Ulisses Dias
2018 J jnl
Sorting permutations and binary strings by length-weighted rearrangements.
Theor. Comput. Sci.
Carla Negri Lintzmayer, Guillaume Fertin, Zanoni Dias
2018 J jnl
Sorting signed circular permutations by super short operations.
Algorithms Mol. Biol.
Andre Rodrigues Oliveira, Guillaume Fertin, Ulisses Dias, Zanoni Dias
2018 — conf
Sorting λ-Permutations by λ-Operations.
BSB
Guilherme Henrique Santos Miranda, Alexsandro Oliveira Alexandrino, Carla Negri Lintzmayer, Zanoni Dias
2018 — conf
Super Short Reversals on Both Gene Order and Intergenic Sizes.
BSB
Andre Rodrigues Oliveira, Géraldine Jean, Guillaume Fertin, Ulisses Dias, Zanoni Dias
2017 J jnl
New dissimilarity measures for image phylogeny reconstruction.
Pattern Anal. Appl.
Filipe de Oliveira Costa, Alberto A. de Oliveira, Pasquale Ferrara, Zanoni Dias, Siome Goldenstein, Anderson Rocha
2017 J jnl
On the Sorting by Reversals and Transpositions Problem.
J. Univers. Comput. Sci.
Andre Rodrigues Oliveira, Ulisses Dias, Zanoni Dias
2017 J jnl
Sorting Circular Permutations by Super Short Reversals.
IEEE ACM Trans. Comput. Biol. Bioinform.
Gustavo Rodrigues Galvão, Christian Baudet, Zanoni Dias
2017 J jnl
Sorting permutations by prefix and suffix rearrangements.
J. Bioinform. Comput. Biol.
Carla Negri Lintzmayer, Guillaume Fertin, Zanoni Dias
2016 J jnl
Distances in multimedia phylogeny.
Int. Trans. Oper. Res.
Marina A. Oikawa, Zanoni Dias, Anderson Rocha, Siome Goldenstein
2016 — conf
Hash-based frame selection for video phylogeny.
WIFS
Filipe de Oliveira Costa, Silvia Lameri, Paolo Bestagini, Zanoni Dias, Stefano Tubaro, Anderson Rocha
2016 J jnl
Manifold Learning and Spectral Clustering for Image Phylogeny Forests.
IEEE Trans. Inf. Forensics Secur.
Marina A. Oikawa, Zanoni Dias, Anderson de Rezende Rocha, Siome Goldenstein
2016 J jnl
Multiple Parenting Phylogeny Relationships in Digital Images.
IEEE Trans. Inf. Forensics Secur.
Alberto A. de Oliveira, Pasquale Ferrara, Alessia De Rosa, Alessandro Piva, Mauro Barni, Siome Goldenstein, Zanoni Dias, Anderson Rocha
2015 J jnl
Approximation algorithms for sorting by length-weighted prefix and suffix operations.
Theor. Comput. Sci.
Carla Negri Lintzmayer, Guillaume Fertin, Zanoni Dias
2015 B conf
Phylogeny reconstruction for misaligned and compressed video sequences.
ICIP
Filipe de Oliveira Costa, S. Lameri, Paolo Bestagini, Zanoni Dias, Anderson Rocha, Marco Tagliasacchi, Stefano Tubaro
2015 — conf
Sorting Signed Circular Permutations by Super Short Reversals.
ISBRA
Gustavo Rodrigues Galvão, Christian Baudet, Zanoni Dias
2015 J jnl
Sorting by Prefix Reversals and Prefix Transpositions.
Discret. Appl. Math.
Zanoni Dias, Ulisses Dias
2015 J jnl
Sorting by weighted inversions considering length and symmetry.
BMC Bioinform.
Christian Baudet, Ulisses Dias, Zanoni Dias
2015 J jnl
Sorting signed permutations by short operations.
Algorithms Mol. Biol.
Gustavo Rodrigues Galvão, Orlando Lee, Zanoni Dias
2014 J jnl
A general heuristic for genome rearrangement problems.
J. Bioinform. Comput. Biol.
Ulisses Dias, Gustavo Rodrigues Galvão, Carla Negri Lintzmayer, Zanoni Dias
2014 J jnl
An Audit Tool for Genome Rearrangement Algorithms.
ACM J. Exp. Algorithmics
Gustavo Rodrigues Galvão, Zanoni Dias
2014 — conf
An improved algorithm for the sorting by reversals and transpositions problem.
BCB
Ulisses Dias, Andre Rodrigues Oliveira, Zanoni Dias
2014 — conf
Approximation algorithms for sorting by signed short reversals.
BCB
Gustavo Rodrigues Galvão, Zanoni Dias
2014 — conf
Heuristics for the Sorting by Length-Weighted Inversions Problem on Signed Permutations.
AlCoB
Thiago da Silva Arruda, Ulisses Dias, Zanoni Dias
2014 J jnl
Image Phylogeny Forests Reconstruction.
IEEE Trans. Inf. Forensics Secur.
Filipe de Oliveira Costa, Marina A. Oikawa, Zanoni Dias, Siome Goldenstein, Anderson de Rezende Rocha
2014 — conf
Length and Symmetry on the Sorting by Weighted Inversions Problem.
BSB
Christian Baudet, Ulisses Dias, Zanoni Dias
2014 B conf
Multiple parenting identification in image phylogeny.
ICIP
Alberto A. de Oliveira, Pasquale Ferrara, Alessia De Rosa, Alessandro Piva, Mauro Barni, Siome Goldenstein, Zanoni Dias, Anderson Rocha
2014 J jnl
On Alternative Approaches for Approximating the Transposition Distance.
J. Univers. Comput. Sci.
Gustavo Rodrigues Galvão, Zanoni Dias
2014 — conf
On Sorting of Signed Permutations by Prefix and Suffix Reversals and Transpositions.
AlCoB
Carla Negri Lintzmayer, Zanoni Dias
2014 — conf
On the Diameter of Rearrangement Problems.
AlCoB
Carla Negri Lintzmayer, Zanoni Dias
2014 B conf
Sorting Permutations by Prefix and Suffix Versions of Reversals and Transpositions.
LATIN
Carla Negri Lintzmayer, Zanoni Dias
2013 J jnl
Exploring heuristic and optimum branching algorithms for image phylogeny.
J. Vis. Commun. Image Represent.
Zanoni Dias, Siome Goldenstein, Anderson Rocha
2013 — conf
Greedy Randomized Search Procedure to Sort Genomes using Symmetric, Almost-Symmetric and Unitary Inversions.
BCB
Ulisses Dias, Christian Baudet, Zanoni Dias
2013 — conf
Heuristics for the Sorting by Length-Weighted Inversion Problem.
BCB
Thiago da Silva Arruda, Ulisses Dias, Zanoni Dias
2013 J jnl
Heuristics for the Transposition Distance Problem.
J. Bioinform. Comput. Biol.
Ulisses Dias, Zanoni Dias
2013 J jnl
Large-Scale Image Phylogeny: Tracing Image Ancestral Relationships.
IEEE Multim.
Zanoni Dias, Siome Goldenstein, Anderson Rocha
2012 J jnl
Image Phylogeny by Minimal Spanning Trees.
IEEE Trans. Inf. Forensics Secur.
Zanoni Dias, Anderson Rocha, Siome Goldenstein
2012 — conf
Improvements to a Multiple Protein Sequence Alignment Tool.
BIOINFORMATICS
André Atanasio M. Almeida, Zanoni Dias
2012 — conf
On the Approximation Ratio of Algorithms for Sorting by Transpositions without Using Cycle Graphs.
BSB
Gustavo Rodrigues Galvão, Zanoni Dias
2012 J jnl
SIS: a program to generate draft genome sequence scaffolds for prokaryotes.
BMC Bioinform.
Zanoni Dias, Ulisses Dias, João C. Setubal
2012 J jnl
Sampling solution traces for the problem of sorting permutations by signed reversals.
Algorithms Mol. Biol.
Christian Baudet, Zanoni Dias, Marie-France Sagot
2012 Misc conf
Sorting genomes using almost-symmetric inversions.
SAC
Zanoni Dias, Ulisses Dias, Lenwood S. Heath, João C. Setubal
2011 Misc conf
Computing rearrangement distance of every permutation in the symmetric group.
SAC
Gustavo Rodrigues Galvão, Zanoni Dias
2011 — conf
Partial enumeration of solutions traces for the problem of sorting by signed reversals.
BCB
Christian Baudet, Zanoni Dias
2011 — conf
Using inversion signatures to generate draft genome sequence scaffolds.
BCB
Zanoni Dias, Ulisses Dias, João C. Setubal
2011 — conf
Video Phylogeny: Recovering near-duplicate video relationships.
WIFS
Zanoni Dias, Anderson Rocha, Siome Goldenstein
2010 — conf
A Simulation Tool for the Study of Symmetric Inversions in Bacterial Genomes.
RECOMB-CG
Ulisses Dias, Zanoni Dias, João C. Setubal
2010 — conf
An improved 1.375-approximation algorithm for the transposition distance problem.
BCB
Ulisses Dias, Zanoni Dias
2010 Misc conf
An improved algorithm to enumerate all traces that sort a signed permutation by reversals.
SAC
Christian Baudet, Zanoni Dias
2010 J jnl
Cassis: detection of genomic rearrangement breakpoints.
Bioinform.
Christian Baudet, Claire Lemaitre, Zanoni Dias, Christian Gautier, Eric Tannier, Marie-France Sagot
2010 — conf
First steps toward image phylogeny.
WIFS
Zanoni Dias, Anderson Rocha, Siome Goldenstein
2009 — conf
Constraint Programming Models for Transposition Distance Problem.
BSB
Ulisses Dias, Zanoni Dias
2008 — conf
Transposition Distance Based on the Algebraic Formalism.
BSB
Cleber V. G. Mira, Zanoni Dias, Hederson P. Santos, Guilherme A. Pinto, Maria Emília M. T. Walter
2007 — conf
New EST Trimming Procedure Applied to SUCEST Sequences.
BSB
Christian Baudet, Zanoni Dias
2005 — conf
Comparison of Genomic DNA to cDNA Alignment Methods.
BSB
Miguel Galves, Zanoni Dias
2005 — conf
New EST Trimming Strategy.
BSB
Christian Baudet, Zanoni Dias
2003 — conf
The Syntenic Distance Problem Using Only Fusions and Fussions.
WOB
Zanoni Dias, João Meidanis
2002 J jnl
A Lower Bound on the Reversal and Transposition Diameter.
J. Comput. Biol.
João Meidanis, Maria Emília Telles Walter, Zanoni Dias
2002 — —
Rearranjo de genomas: uma coletanea de artigos.
Zanoni Dias
2002 C conf
Sorting by Prefix Transpositions.
SPIRE
Zanoni Dias, João Meidanis
2001 C conf
Genome Rearrangements Distance by Fusion, Fission, and Transposition is Easy.
SPIRE
Zanoni Dias, João Meidanis
2000 C conf
A New Approach for Approximating the Tranposition Distance.
SPIRE
Maria Emília Telles Walter, Zanoni Dias, João Meidanis
1998 C conf
Reversal and Transposition Distance of Linear Chromosomes.
SPIRE
Maria Emília Telles Walter, Zanoni Dias, João Meidanis