Zaida Luthey-Schulten

16 papers A 1Journal 12Unranked 3
YearRankTypeTitle / Venue / Authors
2021 J jnl
Multiscale modeling and cinematic visualization of photosynthetic energy conversion processes from electronic to cell scales.
Parallel Comput.
Melih Sener, Stuart Levy, John E. Stone, A. J. Christensen, Barry Isralewitz, Robert Patterson, Kalina Borkiewicz, Jeffrey Carpenter, C. Neil Hunter, Zaida Luthey-Schulten, Donna J. Cox
2020 J jnl
An in-silico human cell model reveals the influence of spatial organization on RNA splicing.
PLoS Comput. Biol.
Zhaleh Ghaemi, Joseph R. Peterson, Martin Gruebele, Zaida Luthey-Schulten
2017 J jnl
Population FBA predicts metabolic phenotypes in yeast.
PLoS Comput. Biol.
Piyush Labhsetwar, Marcelo C. R. Melo, John A. Cole, Zaida Luthey-Schulten
2016 — conf
Evaluation of Emerging Energy-Efficient Heterogeneous Computing Platforms for Biomolecular and Cellular Simulation Workloads.
IPDPS Workshops
John E. Stone, Michael J. Hallock, James C. Phillips, Joseph R. Peterson, Zaida Luthey-Schulten, Klaus Schulten
2016 — conf
Improving Reaction Kernel Performance in Lattice Microbes: Particle-Wise Propensities and Run-Time Generated Code.
IPDPS Workshops
Michael J. Hallock, Zaida Luthey-Schulten
2015 J jnl
Spatially-resolved metabolic cooperativity within dense bacterial colonies.
BMC Syst. Biol.
John A. Cole, Lars Kohler, Jamila Hedhli, Zaida Luthey-Schulten
2014 J jnl
Simulation of reaction diffusion processes over biologically relevant size and time scales using multi-GPU workstations.
Parallel Comput.
Michael J. Hallock, John E. Stone, Elijah Roberts, Corey Fry, Zaida Luthey-Schulten
2013 J jnl
Lattice microbes: High-performance stochastic simulation method for the reaction-diffusion master equation.
J. Comput. Chem.
Elijah Roberts, John E. Stone, Zaida Luthey-Schulten
2011 J jnl
Noise Contributions in an Inducible Genetic Switch: A Whole-Cell Simulation Study.
PLoS Comput. Biol.
Elijah Roberts, Andrew T. Magis, Julio O. Ortiz, Wolfgang Baumeister, Zaida Luthey-Schulten
2009 A conf
Long time-scale simulations of in vivo diffusion using GPU hardware.
IPDPS
Elijah Roberts, John E. Stone, Leonardo Sepulveda, Wen-mei W. Hwu, Zaida Luthey-Schulten
2006 J jnl
MultiSeq: unifying sequence and structure data for evolutionary analysis.
BMC Bioinform.
Elijah Roberts, John Eargle, Dan Wright, Zaida Luthey-Schulten
2006 J jnl
Visualizing the dual space of biological molecules.
Comput. Biol. Chem.
John Eargle, Zaida Luthey-Schulten
2004 J jnl
Classical force field parameters for the heme prosthetic group of cytochrome c.
J. Comput. Chem.
Felix Autenrieth, Emad Tajkhorshid, Jérôme Baudry, Zaida Luthey-Schulten
2002 J jnl
Folding funnels: The key to robust protein structure prediction.
J. Comput. Chem.
Corey Hardin, Michael P. Eastwood, Michael C. Prentiss, Zaida Luthey-Schulten, Peter G. Wolynes
2001 J jnl
Evaluating protein structure-prediction schemes using energy landscape theory.
IBM J. Res. Dev.
Michael P. Eastwood, Corey Hardin, Zaida Luthey-Schulten, Peter G. Wolynes
1994 — conf
A Bayesian Approach to Sequence Alignment Algorithms for Protein Structure Recognition.
HICSS (5)
Richard A. Goldstein, Zaida Luthey-Schulten, Peter G. Wolynes