Zafer Aydin

37 papers C 1Misc 1Journal 25Unranked 9
YearRankTypeTitle / Venue / Authors
2026 J jnl
GraphUnet-SS: A novel deep learning model for protein secondary structure prediction based on U-Net architecture.
Comput. Biol. Medicine
Yasin Görmez, Mostafa Sabzekar, Zafer Aydin
2024 J jnl
An effective colorectal polyp classification for histopathological images based on supervised contrastive learning.
Comput. Biol. Medicine
Sena Busra Yengec Tasdemir, Zafer Aydin, Ebru Akay, Serkan Dogan, Bülent Yilmaz
2024 J jnl
Network intrusion detection based on machine learning strategies: performance comparisons on imbalanced wired, wireless, and software-defined networking (SDN) network traffics.
Turkish J. Electr. Eng. Comput. Sci.
Hilal Hacilar, Zafer Aydin, Vehbi Çagri Güngör
2023 J jnl
IGPRED-MultiTask: A Deep Learning Model to Predict Protein Secondary Structure, Torsion Angles and Solvent Accessibility.
IEEE ACM Trans. Comput. Biol. Bioinform.
Yasin Görmez, Zafer Aydin
2023 J jnl
Improved classification of colorectal polyps on histopathological images with ensemble learning and stain normalization.
Comput. Methods Programs Biomed.
Sena Busra Yengec Tasdemir, Zafer Aydin, Ebru Akay, Serkan Dogan, Bülent Yilmaz
2022 J jnl
Camera-based wildfire smoke detection for foggy environments.
J. Electronic Imaging
Merve Tas, Yusuf Tas, Oguzhan Balki, Zafer Aydin, Kasim Tasdemir
2022 J jnl
The Determination of Distinctive Single Nucleotide Polymorphism Sets for the Diagnosis of Behçet's Disease.
IEEE ACM Trans. Comput. Biol. Bioinform.
Yunus Emre Isik, Yasin Görmez, Zafer Aydin, Burcu Bakir-Gungor
2021 J jnl
A noise-aware feature selection approach for classification.
Soft Comput.
Mostafa Sabzekar, Zafer Aydin
2021 J jnl
Crowdsourcing digital health measures to predict Parkinson's disease severity: the Parkinson's Disease Digital Biomarker DREAM Challenge.
npj Digit. Medicine
Solveig K. Sieberts, Jennifer Schaff, Marlena Duda, Bálint Á Pataki, Ming Sun, Phil Snyder, Jean-Francois Daneault, Federico Parisi, Gianluca Costante, Udi Rubin, Peter Banda, Yooree Chae, Elias Chaibub Neto, Earl Ray Dorsey, Zafer Aydin, Aipeng Chen, Laura L. Elo, Carlos Espino, Enrico Glaab, Ethan Goan, Fatemeh Noushin Golabchi, Yasin Görmez, Maria K. Jaakkola, Jitendra Jonnagaddala, Riku Klén, Dongmei Li, Christian McDaniel, Dimitri Perrin, Thanneer M. Perumal, Nastaran Mohammadian Rad, Erin Rainaldi, Stefano Sapienza, Patrick Schwab, Nikolai Shokhirev, Mikko S. Venäläinen, Gloria Vergara-Diaz, Yuqian Zhang, Avner G. S. Abrami, Aditya Adhikary, Carla Agurto, Sherry Bhalla, Halil Ibrahim Bilgin, Vittorio Caggiano, Jun Cheng, Eden Deng, Qiwei Gan, Rajan Girsa, Zhi Han, Stephen Heisig, Kun Huang, Samad Jahandideh, Wolfgang Kopp, Christoph F. Kurz, Gregor Lichtner, Raquel Norel, G. P. S. Raghava, Tavpritesh Sethi, Nicholas Shawen, Vaibhav Tripathi, Matthew Tsai, Tongxin Wang, Yi Wu, Jie Zhang, Xinyu Zhang, Yuanjia Wang, Yuanfang Guan, Daniela Brunner, Paolo Bonato, Lara M. Mangravite, Larsson Omberg
2021 — conf
Data Mining Techniques in Direct Marketing on Imbalanced Data using Tomek Link Combined with Random Under-sampling.
ICISDM
Ümit Yilmaz, Cengiz Gezer, Zafer Aydin, Vehbi Çagri Güngör
2021 J jnl
Effect of interpolation on specular reflections in texture-based automatic colonic polyp detection.
Int. J. Imaging Syst. Technol.
Rukiye Nur Kaçmaz, Bülent Yilmaz, Zafer Aydin
2020 J jnl
A deep learning approach with Bayesian optimization and ensemble classifiers for detecting denial of service attacks.
Int. J. Commun. Syst.
Yasin Gormez, Zafer Aydin, Ramazan Karademir, Vehbi C. Gungor
2020 J jnl
A review of mammographic region of interest classification.
WIREs Data Mining Knowl. Discov.
Sena Busra Yengec Tasdemir, Kasim Tasdemir, Zafer Aydin
2020 J jnl
Lung cancer subtype differentiation from positron emission tomography images.
Turkish J. Electr. Eng. Comput. Sci.
Oguzhan Ayyildiz, Zafer Aydin, Bülent Yilmaz, Seyhan Karaçavus, Kübra Senkaya, Semra Içer, Arzu Tasdemir, Eser Kaya
2020 J jnl
Metabolic Imaging Based Sub-Classification of Lung Cancer.
IEEE Access
Mustafa Bicakci, Oguzhan Ayyildiz, Zafer Aydin, Alper Bastürk, Seyhan Karaçavus, Bülent Yilmaz
2020 J jnl
Structural profile matrices for predicting structural properties of proteins.
J. Bioinform. Comput. Biol.
Nuh Azginoglu, Zafer Aydin, Mete Celik
2019 J jnl
Developing structural profile matrices for protein secondary structure and solvent accessibility prediction.
Bioinform.
Zafer Aydin, Nuh Azginoglu, Halil Ibrahim Bilgin, Mete Celik
2018 — conf
Comparison of NR and UniClust databases for protein secondary structure prediction.
SIU
Zafer Aydin, Oguz Kaynar, Yasin Gormez
2018 — conf
Comparison of machine learning classifiers for protein secondary structure prediction.
SIU
Zafer Aydin, Oguz Kaynar, Yasin Gormez, Yunus Emre Isik
2018 J jnl
Dimensionality reduction for protein secondary structure and solvent accesibility prediction.
J. Bioinform. Comput. Biol.
Zafer Aydin, Oguz Kaynar, Yasin Gormez
2018 C conf
ROI Detection in Mammogram Images Using Wavelet-Based Haralick and HOG Features.
ICMLA
Sena Busra Yengec Tasdemir, Kasim Tasdemir, Zafer Aydin
2017 J jnl
Protein β-sheet prediction using an efficient dynamic programming algorithm.
Comput. Biol. Chem.
Mostafa Sabzekar, Mahmoud Naghibzadeh, Mahdie Eghdami, Zafer Aydin
2015 J jnl
BAUM-2: a multilingual audio-visual affective face database.
Multim. Tools Appl.
Cigdem Eroglu Erdem, Cigdem Turan, Zafer Aydin
2015 — conf
Constructing Structural Profiles for Protein Torsion Angle Prediction.
BIOINFORMATICS
Zafer Aydin, David Baker, William Stafford Noble
2015 — conf
Template Scoring Methods for Protein Torsion Angle Prediction.
BIOSTEC (Selected Papers)
Zafer Aydin, David Baker, William Stafford Noble
2013 — conf
A method for extraction of affective audio-visual facial clips from movies.
SIU
Cigdem Turan, Can Kansin, Sara Zhalehpour, Zafer Aydin, Cigdem Eroglu Erdem
2011 J jnl
Bayesian Models and Algorithms for Protein β-Sheet Prediction.
IEEE ACM Trans. Comput. Biol. Bioinform.
Zafer Aydin, Yucel Altunbasak, Hakan Erdogan
2011 J jnl
Learning sparse models for a dynamic Bayesian network classifier of protein secondary structure.
BMC Bioinform.
Zafer Aydin, Ajit P. Singh, Jeff A. Bilmes, William Stafford Noble
2010 J jnl
Using machine learning to speed up manual image annotation: application to a 3D imaging protocol for measuring single cell gene expression in the developing
BMC Bioinform.
Zafer Aydin, John I. Murray, Robert H. Waterston, William Stafford Noble
2008 — —
Bayesian models and algoritms for protein secondary structure and beta-sheet prediction.
Zafer Aydin
2007 J jnl
Bayesian Protein Secondary Structure Prediction With Near-Optimal Segmentations.
IEEE Trans. Signal Process.
Zafer Aydin, Yucel Altunbasak, Hakan Erdogan
2007 — conf
Protein Fold Recognition using Residue-Based Alignments of Sequence and Secondary Structure.
ICASSP (1)
Zafer Aydin, Hakan Erdogan, Yucel Altunbasak
2006 J jnl
A signal processing application in genomic research: protein secondary structure prediction.
IEEE Signal Process. Mag.
Zafer Aydin, Yucel Altunbasak
2006 J jnl
Protein secondary structure prediction for a single-sequence using hidden semi-Markov models.
BMC Bioinform.
Zafer Aydin, Yucel Altunbasak, Mark Borodovsky
2005 — conf
A modified stack decoder for protein secondary structure prediction.
ICASSP (4)
Zafer Aydin, Toygar Akgun, Yucel Altunbasak
2004 — conf
Protein secondary structure prediction with semi Markov HMMs.
ICASSP (5)
Zafer Aydin, Yücel Altunbasak, Mark Borodovsky
2002 Misc conf
A new approach to time-frequency localized signal design.
ICASSP
Ahmet Kemal Özdemir, Zafer Aydin, Orhan Arikan