Yuxuan Pang

14 papers Journal 13Unranked 1
YearRankTypeTitle / Venue / Authors
2025 J jnl
PharaCon: a new framework for identifying bacteriophages via conditional representation learning.
Bioinform.
Zeheng Bai, Yao-Zhong Zhang, Yuxuan Pang, Seiya Imoto
2025 J jnl
STForte: tissue context-specific encoding and consistency-aware spatial imputation for spatially resolved transcriptomics.
Briefings Bioinform.
Yuxuan Pang, Chunxuan Wang, Yao-Zhong Zhang, Zhuo Wang, Seiya Imoto, Tzong-Yi Lee
2024 J jnl
A novel hypergraph model for identifying and prioritizing personalized drivers in cancer.
PLoS Comput. Biol.
Naiqian Zhang, Fubin Ma, Dong Guo, Yuxuan Pang, Chenye Wang, Yusen Zhang, Xiaoqi Zheng, Mingyi Wang
2024 J jnl
CapsEnhancer: An Effective Computational Framework for Identifying Enhancers Based on Chaos Game Representation and Capsule Network.
J. Chem. Inf. Model.
Lantian Yao, Peilin Xie, Jiahui Guan, Chia-Ru Chung, Yixian Huang, Yuxuan Pang, Huacong Wu, Ying-Chih Chiang, Tzong-Yi Lee
2023 J jnl
A risk assessment framework for multidrug-resistant
Briefings Bioinform.
Zhuo Wang, Yuxuan Pang, Chia-Ru Chung, Hsin-Yao Wang, Haiyan Cui, Ying-Chih Chiang, Jorng-Tzong Horng, Jang-Jih Lu, Tzong-Yi Lee
2023 J jnl
Extraction of microRNA-target interaction sentences from biomedical literature by deep learning approach.
Briefings Bioinform.
Mengqi Luo, Shangfu Li, Yuxuan Pang, Lantian Yao, Renfei Ma, Hsi-Yuan Huang, Hsien-Da Huang, Tzong-Yi Lee
2022 J jnl
Integrating transformer and imbalanced multi-label learning to identify antimicrobial peptides and their functional activities.
Bioinform.
Yuxuan Pang, Lantian Yao, Jingyi Xu, Zhuo Wang, Tzong-Yi Lee
2022 J jnl
dbAMP 2.0: updated resource for antimicrobial peptides with an enhanced scanning method for genomic and proteomic data.
Nucleic Acids Res.
Jhih-Hua Jhong, Lantian Yao, Yuxuan Pang, Zhongyan Li, Chia-Ru Chung, Rulan Wang, Shangfu Li, Wenshuo Li, Mengqi Luo, Renfei Ma, Yuqi Huang, Xiaoning Zhu, Jiahong Zhang, Hexiang Feng, Qifan Cheng, Chunxuan Wang, Kun Xi, Li-Ching Wu, Tzu-Hao Chang, Jorng-Tzong Horng, Lizhe Zhu, Ying-Chih Chiang, Zhuo Wang, Tzong-Yi Lee
2022 J jnl
dbPTM in 2022: an updated database for exploring regulatory networks and functional associations of protein post-translational modifications.
Nucleic Acids Res.
Zhongyan Li, Shangfu Li, Mengqi Luo, Jhih-Hua Jhong, Wenshuo Li, Lantian Yao, Yuxuan Pang, Zhuo Wang, Rulan Wang, Renfei Ma, Jinhan Yu, Yuqi Huang, Xiaoning Zhu, Qifan Cheng, Hexiang Feng, Jiahong Zhang, Chunxuan Wang, Justin Bo-Kai Hsu, Wen-Chi Chang, Feng-Xiang Wei, Hsien-Da Huang, Tzong-Yi Lee
2021 J jnl
AVPIden: a new scheme for identification and functional prediction of antiviral peptides based on machine learning approaches.
Briefings Bioinform.
Yuxuan Pang, Lantian Yao, Jhih-Hua Jhong, Zhuo Wang, Tzong-Yi Lee
2021 J jnl
Identifying anti-coronavirus peptides by incorporating different negative datasets and imbalanced learning strategies.
Briefings Bioinform.
Yuxuan Pang, Zhuo Wang, Jhih-Hua Jhong, Tzong-Yi Lee
2021 J jnl
UbiNet 2.0: a verified, classified, annotated and updated database of E3 ubiquitin ligase-substrate interactions.
Database J. Biol. Databases Curation
Zhongyan Li, Siyu Chen, Jhih-Hua Jhong, Yuxuan Pang, Kai-Yao Huang, Shangfu Li, Tzong-Yi Lee
2019 — conf
A 3D Multi-scale Virtual Adversarial Network for False Positive Reduction in Pulmonary Nodule Detection.
ICIAI
Yunheng Wu, Yuxuan Pang, Peng Cao
2018 J jnl
Improved bounds for the RIP of Subsampled Circulant matrices.
CoRR
Meng Huang, Yuxuan Pang, Zhiqiang Xu