Yutaka Maruyama

11 papers A 1C 1Journal 7Unranked 2

Year	Rank	Type	Title / Venue / Authors
2024	J	`jnl`	RISMiCal: A software package to perform fast RISM/3D-RISM calculations. J. Comput. Chem. Yutaka Maruyama, Norio Yoshida
2023	J	`jnl`	Analysis of Protein Folding Simulation with Moving Root Mean Square Deviation. J. Chem. Inf. Model. Yutaka Maruyama, Ryo Igarashi, Yoshitaka Ushiku, Ayori Mitsutake
2022	J	`jnl`	Computational Analysis of the SARS-CoV-2 RBD-ACE2-Binding Process Based on MD and the 3D-RISM Theory. J. Chem. Inf. Model. Norio Yoshida, Yutaka Maruyama, Ayori Mitsutake, Akiyoshi Kuroda, Ryo Fujiki, Kodai Kanemaru, Daisuke Okamoto, Alexander E. Kobryn, Sergey Gusarov, Haruyuki Nakano
2020	C	`conf`	Preliminary Performance Evaluation of the Fujitsu A64FX Using HPC Applications. CLUSTER Tetsuya Odajima, Yuetsu Kodama, Miwako Tsuji, Motohiko Matsuda, Yutaka Maruyama, Mitsuhisa Sato
2018	J	`jnl`	Application of reference-modified density functional theory: Temperature and pressure dependences of solvation free energy. J. Comput. Chem. Tomonari Sumi, Yutaka Maruyama, Ayori Mitsutake, Kenji Mochizuki, Kenichiro Koga
2016	—	`conf`	Automatic generation of efficient codes from mathematical descriptions of stencil computation. FHPC@ICFP Takayuki Muranushi, Seiya Nishizawa, Hirofumi Tomita, Keigo Nitadori, Masaki Iwasawa, Yutaka Maruyama, Hisashi Yashiro, Yoshifumi Nakamura, Hideyuki Hotta, Junichiro Makino, Natsuki Hosono, Hikaru Inoue
2016	A	`conf`	Simulations of below-ground dynamics of fungi: 1.184 pflops attained by automated generation and autotuning of temporal blocking codes. SC Takayuki Muranushi, Hideyuki Hotta, Junichiro Makino, Seiya Nishizawa, Hirofumi Tomita, Keigo Nitadori, Masaki Iwasawa, Natsuki Hosono, Yutaka Maruyama, Hikaru Inoue, Hisashi Yashiro, Yoshifumi Nakamura
2015	J	`jnl`	A solvation-free-energy functional: A reference-modified density functional formulation. J. Comput. Chem. Tomonari Sumi, Ayori Mitsutake, Yutaka Maruyama
2015	J	`jnl`	Erratum: "A solvation-free-energy functional: A reference-modified density functional formulation" [J. Comput. Chem 36, 1359-1369]. J. Comput. Chem. Tomonari Sumi, Ayori Mitsutake, Yutaka Maruyama
2014	J	`jnl`	Massively parallel implementation of 3D-RISM calculation with volumetric 3D-FFT. J. Comput. Chem. Yutaka Maruyama, Norio Yoshida, Hiroto Tadano, Daisuke Takahashi, Mitsuhisa Sato, Fumio Hirata
2012	—	`conf`	High performance 3-D FFT using multiple CUDA GPUs. GPGPU@ASPLOS Akira Nukada, Yutaka Maruyama, Satoshi Matsuoka