Yukihiro Murakami

27 papers C 2Misc 1Journal 20Unranked 3
YearRankTypeTitle / Venue / Authors
2026 J jnl
Metrics for classes of semi-binary phylogenetic networks using μ-representations.
Adv. Appl. Math.
Christopher Reichling, Leo van Iersel, Yukihiro Murakami
2025 J jnl
Fence Decompositions and Cherry Covers in Non-Binary Phylogenetic Networks.
IEEE Trans. Comput. Biol. Bioinform.
Joan Carles Pons, Pau Vives López, Yukihiro Murakami, Leo van Iersel
2024 J jnl
A Wild Sheep Chase Through an Orchard.
CoRR
Jordan Dempsey, Leo van Iersel, Mark Jones, Yukihiro Murakami, Norbert Zeh
2024 J jnl
A near-linear kernel for bounded-state parsimony distance.
J. Comput. Syst. Sci.
Elise Deen, Leo van Iersel, Remie Janssen, Mark Jones, Yukihiro Murakami, Norbert Zeh
2024 J jnl
Orienting undirected phylogenetic networks.
J. Comput. Syst. Sci.
Katharina T. Huber, Leo van Iersel, Remie Janssen, Mark Jones, Vincent Moulton, Yukihiro Murakami, Charles Semple
2024 C conf
Resolving Unresolved Resolved and Unresolved Triplets Consistency Problems.
IWOCA
Daniel J. Harvey, Jesper Jansson, Mikolaj Marciniak, Yukihiro Murakami
2024 J jnl
The Burning Number Conjecture is True for Trees without Degree-2 Vertices.
Graphs Comb.
Yukihiro Murakami
2023 C conf
Making a Network Orchard by Adding Leaves.
WABI
Leo van Iersel, Mark Jones, Esther Julien, Yukihiro Murakami
2023 J jnl
Making a Network Orchard by Adding Leaves.
CoRR
Leo van Iersel, Mark Jones, Esther Julien, Yukihiro Murakami
2023 J jnl
Orienting undirected phylogenetic networks to tree-child network.
CoRR
Shunsuke Maeda, Yusuke Kaneko, Hideaki Muramatsu, Yukihiro Murakami, Momoko Hayamizu
2023 J jnl
Polynomial invariants for cactuses.
Inf. Process. Lett.
Leo van Iersel, Vincent Moulton, Yukihiro Murakami
2022 J jnl
A Practical Fixed-Parameter Algorithm for Constructing Tree-Child Networks from Multiple Binary Trees.
Algorithmica
Leo van Iersel, Remie Janssen, Mark Jones, Yukihiro Murakami, Norbert Zeh
2022 J jnl
Level-2 networks from shortest and longest distances.
Discret. Appl. Math.
Katharina T. Huber, Leo van Iersel, Remie Janssen, Mark Jones, Vincent Moulton, Yukihiro Murakami
2021 J jnl
A unifying characterization of tree-based networks and orchard networks using cherry covers.
Adv. Appl. Math.
Leo van Iersel, Remie Janssen, Mark Jones, Yukihiro Murakami, Norbert Zeh
2021 — —
On Phylogenetic Encodings and Orchard Networks.
Yukihiro Murakami
2021 J jnl
On cherry-picking and network containment.
Theor. Comput. Sci.
Remie Janssen, Yukihiro Murakami
2020 — conf
Combining Networks Using Cherry Picking Sequences.
AlCoB
Remie Janssen, Mark Jones, Yukihiro Murakami
2020 — conf
Linear Time Algorithm for Tree-Child Network Containment.
AlCoB
Remie Janssen, Yukihiro Murakami
2020 J jnl
Polynomial-Time Algorithms for Phylogenetic Inference Problems Involving Duplication and Reticulation.
IEEE ACM Trans. Comput. Biol. Bioinform.
Leo van Iersel, Remie Janssen, Mark Jones, Yukihiro Murakami, Norbert Zeh
2020 J jnl
Recognizing and realizing cactus metrics.
Inf. Process. Lett.
Momoko Hayamizu, Katharina T. Huber, Vincent Moulton, Yukihiro Murakami
2020 J jnl
Reconstructibility of unrooted level-
Adv. Appl. Math.
Leo van Iersel, Vincent Moulton, Yukihiro Murakami
2019 J jnl
A Practical Fixed-Parameter Algorithm for Constructing Tree-Child Networks from Multiple Binary Trees.
CoRR
Leo van Iersel, Remie Janssen, Mark Jones, Yukihiro Murakami, Norbert Zeh
2019 J jnl
Combining Networks using Cherry Picking Sequences.
CoRR
Remie Janssen, Mark Jones, Yukihiro Murakami
2019 J jnl
Recognizing and realizing cactus metrics.
CoRR
Momoko Hayamizu, Katharina T. Huber, Vincent Moulton, Yukihiro Murakami
2019 J jnl
Rooting for phylogenetic networks.
CoRR
Katharina T. Huber, Leo van Iersel, Remie Janssen, Mark Jones, Vincent Moulton, Yukihiro Murakami, Charles Semple
2018 — conf
Polynomial-Time Algorithms for Phylogenetic Inference Problems.
AlCoB
Leo van Iersel, Remie Janssen, Mark Jones, Yukihiro Murakami, Norbert Zeh
2010 Misc conf
A sparse adaptive filtering using time-varying soft-thresholding techniques.
ICASSP
Yukihiro Murakami, Masao Yamagishi, Masahiro Yukawa, Isao Yamada