Yuanyuan Zhang

46 papers Journal 39Unranked 7
YearRankTypeTitle / Venue / Authors
2026 J jnl
A Semantic Conditional Diffusion Model for Enhanced Personal Privacy Preservation in Medical Images.
IEEE J. Biomed. Health Informatics
Shudong Wang, Zhiyuan Zhao, Yawu Zhao, Luqi Wang, Yuanyuan Zhang, Jiehuan Wang, Sibo Qiao, Zhihan Lyu
2026 J jnl
DPSM-Synergy: A Dual-Path Feature Extraction and Synergy Matrix Enhancement Method for Anti-Cancer Drug Synergy Prediction.
J. Chem. Inf. Model.
Jinlong Wang, Wensheng An, Huaibin Hang, Ciao Zhang, Yuanyuan Zhang
2026 J jnl
Synthetic Assessment of Transfer Learning Method From Cell Lines to Single-Cell on Drug Response Prediction.
IEEE Trans. Comput. Biol. Bioinform.
Yuanyuan Zhang, Wenying Li, Zhennuo Wang, Shuang Du, Shaoqiang Wang
2025 J jnl
Convolution Bridge: An Effective Algorithmic Migration Strategy From CNNs to GNNs.
IEEE Trans. Neural Networks Learn. Syst.
Kuijie Zhang, Shanchen Pang, Huahui Yang, Yuanyuan Zhang, Wenhao Wu, Hengxiao Li, Jerry Chun-Wei Lin
2025 — conf
DBAANet: Dual-Branch Attention Aggregation Network for Medical Image Segmentation.
BIBM
Shichao Li, Qihao Wang, Guiling Shi, Kaihao Zhang, Shaoqiang Wang, Yuanyuan Zhang
2025 J jnl
Deciphering circRNA-drug sensitivity associations via global-local heterogeneous matrix factorization and hypergraph contrastive learning.
Expert Syst. Appl.
Tiyao Liu, Shudong Wang, Yuanyuan Zhang, Shanchen Pang, Wenjing Yin, Wenhao Wu, Yingye Liu
2025 J jnl
Dual Encoder Cross-Shape Transformer Network for Medical Image Segmentation in Internet of Medical Things for Consumer Health.
IEEE Trans. Consumer Electron.
Yawu Zhao, Shudong Wang, Yulin Zhang, Yande Ren, Yuanyuan Zhang, Shanchen Pang
2025 J jnl
Dynamic scheduling in flexible and hybrid disassembly systems with manual and automated workstations using reward-shaping enhanced reinforcement learning.
Eng. Appl. Artif. Intell.
Jinlong Wang, Qihuiyang Liang, Min Li, Zelin Qu, Yuanyuan Zhang
2025 J jnl
FedLMA: A Federated Learning Framework Integrating LLM-Based Multi-Agent Reasoning With Knowledge Distillation.
IEEE Trans. Consumer Electron.
Jinlong Wang, Yunting Wu, Xiaoyun Xiong, Yuanyuan Zhang, Zhihan Lyu, Ahmed Ghoneim, Haoran Zhao
2025 J jnl
IRPCA: An Interpretable Robust Principal Component Analysis Framework for Inferring miRNA-Drug Associations.
J. Chem. Inf. Model.
Yunyin Li, Shudong Wang, Yuanyuan Zhang, Chuanru Ren, Tiyao Liu, Yingye Liu, Shanchen Pang
2025 J jnl
MOCapsNet: Multiomics Data Integration for Cancer Subtype Analysis Based on Dynamic Self-Attention Learning and Capsule Networks.
J. Chem. Inf. Model.
Yuanyuan Zhang, Haoyu Zheng, Xiaokun Meng, Qihao Wang, Zimin Li, Wenhao Wu
2025 J jnl
MOHGCN: A trustworthy multi-omics data integration framework based on specificity-aware heterogeneous graph convolutional neural networks for disease diagnosis.
Expert Syst. Appl.
Wenhao Wu, Shudong Wang, Yuanyuan Zhang, Kuijie Zhang, Wenjing Yin, Shanchen Pang
2025 J jnl
MPSO-CD: A Multi-Objective Particle Swarm Optimization Community Detection Method for Identifying Disease Modules.
IEEE Trans. Comput. Biol. Bioinform.
Xuhui Zhu, Mingyuan Bi, Junliang Shang, Yan Sun, Feng Li, Yuanyuan Zhang, Ling-Yun Dai, Shengjun Li, Jinxing Liu
2025 J jnl
Multi-echelon inventory optimization of waste electrical and electronic equipment closed-loop supply chain based on reinforcement learning under carbon tax policy.
Eng. Appl. Artif. Intell.
Jinlong Wang, Shangzhuo Zhou, Min Li, Guanyu Ren, Xianquan Ren, Xiaoyun Xiong, Yuanyuan Zhang
2025 J jnl
Risk identification of listed companies violation by integrating knowledge graph and multi-source risk factors.
Eng. Appl. Artif. Intell.
Jinlong Wang, Pengjun Li, Yingmin Liu, Xiaoyun Xiong, Yuanyuan Zhang, Zhihan Lv
2025 J jnl
scMDCL: A Deep Collaborative Contrastive Learning Framework for Matched Single-Cell Multiomics Data Clustering.
J. Chem. Inf. Model.
Wenhao Wu, Shudong Wang, Kuijie Zhang, Hengxiao Li, Sibo Qiao, Yuanyuan Zhang, Shanchen Pang
2025 J jnl
scSFCL:Deep clustering of scRNA-seq data with subspace feature confidence learning.
Comput. Biol. Chem.
Xiaokun Meng, Yuanyuan Zhang, Xiaoyu Xu, Kaihao Zhang, Baoming Feng
2024 — conf
A Particle Swarm Optimization Algorithm Based on Multi-Population Mutual Learning for SNP-SNP Interaction Detection.
BIBM
Linqian Zhao, Yahan Li, Junliang Shang, Qianqian Ren, Yuanyuan Zhang, Jin-Xing Liu
2024 — conf
A multi-objective genetic algorithm based on neighborhood coevolution for community detection.
BIBM
Mingyuan Bi, Junliang Shang, Xiaotong Kong, Feng Li, Yuanyuan Zhang, Jin-Xing Liu
2024 J jnl
Application of Artificial Intelligence in Drug-Drug Interactions Prediction: A Review.
J. Chem. Inf. Model.
Yuanyuan Zhang, Zengqian Deng, Xiaoyu Xu, Yinfei Feng, Junliang Shang
2024 — conf
CPSORCL: A Cooperative Particle Swarm Optimization Method with Random Contrastive Learning for Interactive Feature Selection.
ISBRA (2)
Junliang Shang, Yahan Li, Xiaohan Zhang, Feng Li, Yuanyuan Zhang, Jin-Xing Liu
2024 J jnl
Collaborative Construction Method of Biomedical Knowledge Graph Based on Multi-Blockchain.
Distributed Ledger Technol. Res. Pract.
Jinlong Wang, Zhenxi Xie, Hui Xin, Pengjun Li, Yuanyuan Zhang, Xiaoyun Xiong, Jerry Chun-Wei Lin
2024 J jnl
DualA-Net: A generalizable and adaptive network with dual-branch encoder for medical image segmentation.
Comput. Methods Programs Biomed.
Yuanyuan Zhang, Ziyi Han, Lin Liu, Shudong Wang
2024 J jnl
Graph attention autoencoder model with dual decoder for clustering single-cell RNA sequencing data.
Appl. Intell.
Shudong Wang, Yu Zhang, Yuanyuan Zhang, Yulin Zhang, Shanchen Pang, Jionglong Su, Yingye Liu
2024 J jnl
Heterogeneous graph inference with range constrainted L2,1-collaborative matrix factorization for small molecule-miRNA association prediction.
Comput. Biol. Chem.
Shudong Wang, Tiyao Liu, Chuanru Ren, Yawu Zhao, Sibo Qiao, Yuanyuan Zhang, Shanchen Pang
2024 — conf
IEARACDA: Predicting circRNA-disease associations based on information enhancement and arctangent rank approximation.
BIBM
Shanchen Pang, Zheqi Song, Tiyao Liu, Wenhao Wu, Yuanyuan Zhang, Shudong Wang
2024 J jnl
MOSGAT: Uniting Specificity-Aware GATs and Cross Modal-Attention to Integrate Multi-Omics Data for Disease Diagnosis.
IEEE J. Biomed. Health Informatics
Wenhao Wu, Shudong Wang, Yuanyuan Zhang, Wenjing Yin, Yawu Zhao, Shanchen Pang
2024 J jnl
Multi-resolution sequence and structure feature extraction for binding site prediction.
Eng. Appl. Artif. Intell.
Wenjing Yin, Shudong Wang, Sibo Qiao, Yuanyuan Zhang, Shanchen Pang
2024 J jnl
Multirelational Hypergraph Representation Learning for Predicting circRNA-miRNA Associations.
J. Chem. Inf. Model.
Wenjing Yin, Shudong Wang, Yuanyuan Zhang, Sibo Qiao, Wenhao Wu, Hengxiao Li
2024 J jnl
SimHOEPI: A resampling simulator for generating single nucleotide polymorphism data with a high-order epistasis model.
Quant. Biol.
Yahan Li, Xinrui Cai, Junliang Shang, Yuanyuan Zhang, Jin-Xing Liu
2024 J jnl
TIWMFLP: Two-Tier Interactive Weighted Matrix Factorization and Label Propagation Based on Similarity Matrix Fusion for Drug-Disease Association Prediction.
J. Chem. Inf. Model.
Tiyao Liu, Shudong Wang, Yuanyuan Zhang, Yunyin Li, Yingye Liu, Shiyuan Huang
2024 J jnl
TSCNet: Topology and semantic co-mining node representation learning based on direct perception strategy.
Knowl. Based Syst.
Kuijie Zhang, Shanchen Pang, Yuanyuan Zhang, Wenhao Wu, Xiao He, Haiyuan Gui
2023 J jnl
AF-GCN: Completing various graph tasks efficiently via adaptive quadratic frequency response function in graph spectral domain.
Inf. Sci.
Shanchen Pang, Kuijie Zhang, Gan Wang, Jerry Chun-Wei Lin, Fuyu Wang, Xiangyu Meng, Shudong Wang, Yuanyuan Zhang
2023 J jnl
Generative Adversarial Matrix Completion Network based on Multi-Source Data Fusion for miRNA-Disease Associations Prediction.
Briefings Bioinform.
Shudong Wang, Yunyin Li, Yuanyuan Zhang, Shanchen Pang, Sibo Qiao, Yu Zhang, Fuyu Wang
2023 J jnl
Predicting potential small molecule-miRNA associations utilizing truncated schatten p-norm.
Briefings Bioinform.
Shudong Wang, Tiyao Liu, Chuanru Ren, Wenhao Wu, Zhiyuan Zhao, Shanchen Pang, Yuanyuan Zhang
2023 J jnl
TranSEFusionNet: Deep fusion network for colorectal polyp segmentation.
Biomed. Signal Process. Control.
Yuanyuan Zhang, Lin Liu, Ziyi Han, Fanyun Meng, Yulin Zhang, Yawu Zhao
2023 J jnl
VGAEDTI: drug-target interaction prediction based on variational inference and graph autoencoder.
BMC Bioinform.
Yuanyuan Zhang, Yinfei Feng, Mengjie Wu, Zengqian Deng, Shudong Wang
2021 — conf
HGDD: A Drug-Disease High-Order Association Information Extraction Method for Drug Repurposing via Hypergraph.
ISBRA
Shanchen Pang, Kuijie Zhang, Shudong Wang, Yuanyuan Zhang, Sicheng He, Wenhao Wu, Sibo Qiao
2021 J jnl
MOPIO: A Multi-Objective Pigeon-Inspired Optimization Algorithm for Community Detection.
Symmetry
Junliang Shang, Yiting Li, Yan Sun, Feng Li, Yuanyuan Zhang, Jin-Xing Liu
2021 J jnl
TagSNP-set selection for genotyping using integrated data.
Future Gener. Comput. Syst.
Shudong Wang, Gaowei Liu, Xinzeng Wang, Yuanyuan Zhang, Sicheng He, Yulin Zhang
2020 J jnl
Identification of Critical Core Genes of Sarcoma Based on Centrality Analysis of Networks Nodes.
J. Medical Imaging Health Informatics
Shudong Wang, Jixiao Wang, Xinzeng Wang, Yuanyuan Zhang, Tao Yi
2020 J jnl
PESM: A novel approach of tumor purity estimation based on sample specific methylation sites.
J. Bioinform. Comput. Biol.
Shanchen Pang, Lihua Wang, Shudong Wang, Yuanyuan Zhang, Xinzeng Wang
2020 J jnl
SINE: Second-Order Information Network Embedding.
IEEE Access
Ziqi Wang, Yuanyuan Zhang, Shudong Wang, Junliang Shang
2019 J jnl
Identification of PIWI-interacting RNA modules by weighted correlation network analysis.
Clust. Comput.
Yajun Liu, Junying Zhang, Aimin Li, Yuanyuan Zhang, Yaoyao Li, Xiguo Yuan, Zhongzhen He, Zhaowen Liu, Shouheng Tuo
2019 — conf
Inferring Communities and Key Genes of Triple Negative Breast Cancer Based on Robust Principal Component Analysis and Network Analysis.
IDMB
Qian Ding, Yan Sun, Junliang Shang, Yuanyuan Zhang, Feng Li, Jin-Xing Liu
2019 J jnl
PEIS: a novel approach of tumor purity estimation by identifying information sites through integrating signal based on DNA methylation data.
BMC Bioinform.
Shudong Wang, Lihua Wang, Yuanyuan Zhang, Shanchen Pang, Xinzeng Wang