Yuan Zhu

16 papers B 1Misc 2Journal 12Unranked 1
YearRankTypeTitle / Venue / Authors
2025 J jnl
D3Impute: Dropout-aware discrimination, distribution-aware modeling, and density-guide imputation for scRNA-seq data.
PLoS Comput. Biol.
Siyi Huang, Linfeng Jiang, Ming Yi, Yuan Zhu
2025 J jnl
Preoperative Prediction of Microvascular Invasion in Hepatocellular Carcinoma From Multi-Sequence Magnetic Resonance Imaging Based on Deep Fusion Representation Learning.
IEEE J. Biomed. Health Informatics
Haishu Ma, Lili Wang, Lingzhi Sun, Shinan Wang, Lulu Lu, Chaoyang Zhang, Yong He, Yuan Zhu
2025 — conf
TPLN: Cell-Type-Specific Gene Regulatory Network Inference Based on Poisson Log-Normal Model.
BIBM
Siyi Huang, Wenfei Fu, Ming Yi, Yuan Zhu
2024 Misc conf
Prediction of gene regulatory networks based on graph attention mechanisms.
ICMLC
Shi Huang Fei, Yuan Zhu
2022 Misc conf
Variational Autoencoder Based Network Embedding Algorithm For Protein Function Prediction.
ICMLC
Guansong Cao, Yuan Zhu, Ming Yi
2022 J jnl
scDEA: differential expression analysis in single-cell RNA-sequencing data via ensemble learning.
Briefings Bioinform.
Hui-Sheng Li, Le Ou-Yang, Yuan Zhu, Hong Yan, Xiao-Fei Zhang
2021 J jnl
Differential network analysis by simultaneously considering changes in gene interactions and gene expression.
Bioinform.
Jia-Juan Tu, Le Ou-Yang, Yuan Zhu, Hong Yan, Hong Qin, Xiao-Fei Zhang
2019 J jnl
A unified formulation of a class of graph matching techniques.
Pattern Recognit.
Yuan Zhu, Jiufeng Zhou, Hong Yan
2017 J jnl
AMOBH: Adaptive Multiobjective Black Hole Algorithm.
Comput. Intell. Neurosci.
Chong Wu, Tao Wu, Kaiyuan Fu, Yuan Zhu, Yongbo Li, Wangyong He, Shengwen Tang
2017 J jnl
Inference of cellular level signaling networks using single-cell gene expression data in Caenorhabditis elegans reveals mechanisms of cell fate specification.
Bioinform.
Xiao-Tai Huang, Yuan Zhu, Leanne Lai-Hang Chan, Zhongying Zhao, Hong Yan
2016 J jnl
Comparative analysis of housekeeping and tissue-specific driver nodes in human protein interaction networks.
BMC Bioinform.
Xiao-Fei Zhang, Le Ou-Yang, Dao-Qing Dai, Meng-Yun Wu, Yuan Zhu, Hong Yan
2016 J jnl
Protein complex detection based on partially shared multi-view clustering.
BMC Bioinform.
Le Ou-Yang, Xiao-Fei Zhang, Dao-Qing Dai, Meng-Yun Wu, Yuan Zhu, Zhiyong Liu, Hong Yan
2016 J jnl
Regularized logistic regression with network-based pairwise interaction for biomarker identification in breast cancer.
BMC Bioinform.
Meng-Yun Wu, Xiao-Fei Zhang, Dao-Qing Dai, Le Ou-Yang, Yuan Zhu, Hong Yan
2015 J jnl
Determining minimum set of driver nodes in protein-protein interaction networks.
BMC Bioinform.
Xiao-Fei Zhang, Le Ou-Yang, Yuan Zhu, Meng-Yun Wu, Dao-Qing Dai
2015 B conf
Local Topology Preserved Tensor Models for Graph Matching.
SMC
Jiufeng Zhou, Hong Yan, Yuan Zhu
2013 J jnl
Identification of DNA-Binding and Protein-Binding Proteins Using Enhanced Graph Wavelet Features.
IEEE ACM Trans. Comput. Biol. Bioinform.
Yuan Zhu, Weiqiang Zhou, Dao-Qing Dai, Hong Yan