Yongchun Zuo - RankMe

32 papers Journal 30Unranked 2

Year	Rank	Type	Title / Venue / Authors
2026	J	`jnl`	Refining cell subpopulation identification and cell fate mapping using cell energy. Expert Syst. Appl. Chunshen Long, Hanshuang Li, Zhifang Li, Jia Zhang, Qilemuge Xi, Yongchun Zuo
2025	J	`jnl`	Recent advances in deep learning for protein-protein interaction: a review. BioData Min. Jiafu Cui, Siqi Yang, Litai Yi, Qilemuge Xi, Dezhi Yang, Yongchun Zuo
2024	J	`jnl`	Chromatin region binning of gene expression for improving embryo cell subtype identification. Comput. Biol. Medicine Pengfei Liang, Hanshuang Li, Chunshen Long, Mingzhu Liu, Jian Zhou, Yongchun Zuo
2024	J	`jnl`	Integrated deep learning model for automatic detection and classification of stenosis in coronary angiography. Comput. Biol. Chem. Tao Wang, Xiaojun Su, Yuchao Liang, Xu Luo, Xiao Hu, Ting Xia, Xuebin Ma, Yongchun Zuo, Huilin Xia, Lei Yang
2024	J	`jnl`	Integrating somatic mutation profiles with structural deep clustering network for metabolic stratification in pancreatic cancer: a comprehensive analysis of prognostic and genomic landscapes. Briefings Bioinform. Min Zou, Honghao Li, Dongqing Su, Yuqiang Xiong, Haodong Wei, Shiyuan Wang, Hongmei Sun, Tao Wang, Qilemuge Xi, Yongchun Zuo, Lei Yang
2024	J	`jnl`	SpaNCMG: improving spatial domains identification of spatial transcriptomics using neighborhood-complementary mixed-view graph convolutional network. Briefings Bioinform. Zhihao Si, Hanshuang Li, Wenjing Shang, Yanan Zhao, Lingjiao Kong, Chunshen Long, Yongchun Zuo, Zhenxing Feng
2023	J	`jnl`	A computational framework of routine test data for the cost-effective chronic disease prediction. Briefings Bioinform. Mingzhu Liu, Jian Zhou, Qilemuge Xi, Yuchao Liang, Haicheng Li, Pengfei Liang, Yuting Guo, Ming Liu, Temuqile Temuqile, Lei Yang, Yongchun Zuo
2023	J	`jnl`	A random forest-based metabolic risk model to assess the prognosis and metabolism-related drug targets in ovarian cancer. Comput. Biol. Medicine Haoxin Zhang, Meng Chi, Dongqing Su, Yuqiang Xiong, Haodong Wei, Yao Yu, Yongchun Zuo, Lei Yang
2023	J	`jnl`	EmAtlas: a comprehensive atlas for exploring spatiotemporal activation in mammalian embryogenesis. Nucleic Acids Res. Lei Zheng, Pengfei Liang, Chunshen Long, Haicheng Li, Hanshuang Li, Yuchao Liang, Xiang He, Qilemuge Xi, Yongqiang Xing, Yongchun Zuo
2023	J	`jnl`	Structural deep clustering network for stratification of breast cancer patients through integration of somatic mutation profiles. Comput. Methods Programs Biomed. Dongqing Su, Yuqiang Xiong, Shiyuan Wang, Haodong Wei, Jiawei Ke, Honghao Li, Tao Wang, Yongchun Zuo, Lei Yang
2022	J	`jnl`	RaacFold: a webserver for 3D visualization and analysis of protein structure by using reduced amino acid alphabets. Nucleic Acids Res. Lei Zheng, Dongyang Liu, Yuan Alex Li, Siqi Yang, Yuchao Liang, Yongqiang Xing, Yongchun Zuo
2022	J	`jnl`	iProbiotics: a machine learning platform for rapid identification of probiotic properties from whole-genome primary sequences. Briefings Bioinform. Yu Sun, Haicheng Li, Lei Zheng, Jinzhao Li, Yan Hong, Pengfei Liang, Lai-Yu Kwok, Yongchun Zuo, Wenyi Zhang, Heping Zhang
2021	J	`jnl`	ANPrAod: Identify Antioxidant Proteins by Fusing Amino Acid Clustering Strategy and N -Peptide Combination. Comput. Math. Methods Medicine Qilemuge Xi, Hao Wang, Liuxi Yi, Jian Zhou, Yuchao Liang, Xiaoqing Zhao, Yongchun Zuo
2021	J	`jnl`	Clinical significance and immunogenomic landscape analyses of the immune cell signature based prognostic model for patients with breast cancer. Briefings Bioinform. Shiyuan Wang, Yuqiang Xiong, Qi Zhang, Dongqing Su, Chunlu Yu, Yiyin Cao, Yi Pan, Qianzi Lu, Yongchun Zuo, Lei Yang
2021	J	`jnl`	Dppa2/4 as a trigger of signaling pathways to promote zygote genome activation by binding to CG-rich region. Briefings Bioinform. Hanshuang Li, Chunshen Long, Jinzhu Xiang, Pengfei Liang, Xueling Li, Yongchun Zuo
2021	J	`jnl`	HelPredictor models single-cell transcriptome to predict human embryo lineage allocation. Briefings Bioinform. Pengfei Liang, Lei Zheng, Chunshen Long, Wuritu Yang, Lei Yang, Yongchun Zuo
2021	J	`jnl`	Immune cell infiltration-based signature for prognosis and immunogenomic analysis in breast cancer. Briefings Bioinform. Shiyuan Wang, Qi Zhang, Chunlu Yu, Yiyin Cao, Yongchun Zuo, Lei Yang
2021	J	`jnl`	Modular arrangements of sequence motifs determine the functional diversity of KDM proteins. Briefings Bioinform. Zerong Wang, Dongyang Liu, Baofang Xu, Ruixia Tian, Yongchun Zuo
2021	J	`jnl`	RaacLogo: a new sequence logo generator by using reduced amino acid clusters. Briefings Bioinform. Lei Zheng, Dongyang Liu, Wuritu Yang, Lei Yang, Yongchun Zuo
2021	J	`jnl`	eHSCPr discriminating the cell identity involved in endothelial to hematopoietic transition. Bioinform. Hao Wang, Pengfei Liang, Lei Zheng, Chunshen Long, Hanshuang Li, Yongchun Zuo
2020	J	`jnl`	ICTC-RAAC: An improved web predictor for identifying the types of ion channel-targeted conotoxins by using reduced amino acid cluster descriptors. Comput. Biol. Chem. Zijie Sun, Shenghui Huang, Lei Zheng, Pengfei Liang, Wuritu Yang, Yongchun Zuo
2020	J	`jnl`	Mining Key Regulators of Cell Reprogramming and Prediction Research Based on Deep Learning Neural Networks. IEEE Access Na Ta, Hanshuang Li, Shuai Liu, Yongchun Zuo
2019	J	`jnl`	Function determinants of TET proteins: the arrangements of sequence motifs with specific codes. Briefings Bioinform. Dongyang Liu, Guangpeng Li, Yongchun Zuo
2019	J	`jnl`	RAACBook: a web server of reduced amino acid alphabet for sequence-dependent inference by using Chou's five-step rule. Database J. Biol. Databases Curation Lei Zheng, Shenghui Huang, Nengjiang Mu, Haoyue Zhang, Jiayu Zhang, Yu Chang, Lei Yang, Yongchun Zuo
2019	J	`jnl`	Transcriptome Comparisons of Multi-Species Identify Differential Genome Activation of Mammals Embryogenesis. IEEE Access Chunshen Long, Wei Li, Pengfei Liang, Shuai Liu, Yongchun Zuo
2018	J	`jnl`	Genome-wide analysis of H3K36me3 and its regulations to cancer-related genes expression in human cell lines. Biosyst. Lu-Qiang Zhang, Qian-Zhong Li, Wen Jin, Yongchun Zuo, Shu-Chun Guo
2018	J	`jnl`	Nucleosome Positioning With Fractal Entropy Increment of Diversity in Telemedicine. IEEE Access Mengye Lu, Shuai Liu, Arun Kumar Sangaiah, Yunpeng Zhou, Zheng Pan, Yongchun Zuo
2017	J	`jnl`	Dynamic and modular gene regulatory networks drive the development of gametogenesis. Briefings Bioinform. Dongxue Che, Yang Wang, Weiyang Bai, Leijie Li, Guiyou Liu, Liangcai Zhang, Yongchun Zuo, Shiheng Tao, Jinlian Hua, Mingzhi Liao
2017	J	`jnl`	PseKRAAC: a flexible web server for generating pseudo K-tuple reduced amino acids composition. Bioinform. Yongchun Zuo, Yuan Li, Yingli Chen, Guangpeng Li, Zhenhe Yan, Lei Yang
2013	J	`jnl`	PreDNA: accurate prediction of DNA-binding sites in proteins by integrating sequence and geometric structure information. Bioinform. Tao Li, Qian-Zhong Li, Shuai Liu, Guoliang Fan, Yongchun Zuo, Yong Peng
2009	—	`conf`	Predicting Plant Pol-II Promoter Based on Subsequence Increment of Overlap Content Diversity. BMEI Yongchun Zuo, Qianzhong Li
2009	—	`conf`	Prediction of Presynaptic and Postsynaptic Neurotoxins Using Hybrid Approach and Pseudo Amino Acid Composition. BMEI Lei Yang, Qianzhong Li, Yongchun Zuo