Yipeng Hu - RankMe

214 papers A* 2A 1B 2Journal 134Unranked 72

Year	Rank	Type	Title / Venue / Authors
2026	J	`jnl`	Deep EM with Hierarchical Latent Label Modelling for Multi-Site Prostate Lesion Segmentation. CoRR Wen Yan, Yipei Wang, Shiqi Huang, Natasha Thorley, Mark Emberton, Vasilis Stavrinides, Yipeng Hu, Dean C. Barratt
2026	J	`jnl`	Flow Matching-enabled Test-Time Refinement for Unsupervised Cardiac MR Registration. CoRR Yunguan Fu, Wenjia Bai, Wen Yan, Matthew J. Clarkson, Rhodri H. Davies, Yipeng Hu
2026	J	`jnl`	Interpretability and Individuality in Knee MRI: Patient-Specific Radiomic Fingerprint with Reconstructed Healthy Personas. CoRR Yaxi Chen, Simin Ni, Shuai Li, Shaheer U. Saeed, Aleksandra Ivanova, Rikin Hargunani, Jie Huang, Chaozong Liu, Yipeng Hu
2026	J	`jnl`	Mixture of Distributions Matters: Dynamic Sparse Attention for Efficient Video Diffusion Transformers. CoRR Yuxi Liu, Yipeng Hu, Zekun Zhang, Kunze Jiang, Kun Yuan
2026	J	`jnl`	On the Degrees of Freedom of Gridded Control Points in Learning-Based Medical Image Registration. CoRR Wen Yan, Qianye Yang, Yipei Wang, Shonit Punwani, Mark Emberton, Vasilis Stavrinides, Yipeng Hu, Dean C. Barratt
2026	J	`jnl`	ProFound: A moderate-sized vision foundation model for multi-task prostate imaging. CoRR Yipei Wang, Yinsong Xu, Weixi Yi, Shaheer Ullah Saeed, Natasha Thorley, Alexander Ng, Yukun Zhou, Wen Yan, Dean C. Barratt, Shonit Punwani, Veeru Kasivisvanathan, Mark Emberton, Daniel C. Alexander, Yipeng Hu
2026	J	`jnl`	Promptable segmentation with region exploration enables minimal-effort expert-level prostate cancer delineation. CoRR Junqing Yang, Natasha Thorley, Ahmed Nadeem Abbasi, Shonit Punwani, Zion Tse, Yipeng Hu, Shaheer U. Saeed
2026	J	`jnl`	Radiomics-Integrated Deep Learning with Hierarchical Loss for Osteosarcoma Histology Classification. CoRR Yaxi Chen, Zi Ye, Shaheer U. Saeed, Oliver Yu, Simin Ni, Jie Huang, Yipeng Hu
2026	J	`jnl`	Retrieving Patient-Specific Radiomic Feature Sets for Transparent Knee MRI Assessment. CoRR Yaxi Chen, Simin Ni, Jingjing Zhang, Shaheer U. Saeed, Yipei Wang, Aleksandra Ivanova, Rikin Hargunani, Chaozong Liu, Jie Huang, Yipeng Hu
2026	J	`jnl`	SEQUAL: Self-refining and effective querying active learning with pseudo label divergence score for carotid intima-media segmentation in ultrasound. Medical Image Anal. Yucheng Tang, Yipeng Hu, Jing Li, Hu Lin, Chao Rong, Ciyuan Feng, Xiuzhen Yang, Xiang Xu, Ke Huang, Hongxiang Lin
2026	J	`jnl`	Understanding the Transfer Limits of Vision Foundation Models. CoRR Shiqi Huang, Yipei Wang, Natasha Thorley, Alexander Ng, Shaheer U. Saeed, Mark Emberton, Shonit Punwani, Veeru Kasivisvanathan, Dean C. Barratt, Daniel C. Alexander, Yipeng Hu
2025	—	`conf`	A Deep Learning Framework for Fetal Heart Tracking in Ultrasound Videos: Toward Enhanced Congenital Heart Defects Detection. FIMH (2) Qianye Yang, Kangning Cui, Yipeng Hu, Can Peng, Netzahualcoyotl Hernandez-Cruz, Rahul Ahuja, Elena D'Alberti, Raymond Chan, Olga Patey, Aris T. Papageorghiou, J. Alison Noble
2025	J	`jnl`	A computationally frugal open-source foundation model for thoracic disease detection in lung cancer screening programs. CoRR Niccolò McConnell, Pardeep Vasudev, Daisuke Yamada, Daryl Cheng, Mehran Azimbagirad, John McCabe, Shahab Aslani, Ahmed H. Shahin, Yukun Zhou, SUMMIT Consortium, André Altmann, Yipeng Hu, Paul Taylor, Sam M. Janes, Daniel C. Alexander, Joseph Jacob
2025	—	`conf`	Analysis of Image-and-Text Uncertainty Propagation in Multimodal Large Language Models with Cardiac MR-Based Applications. MICCAI (4) Yucheng Tang, Yunguan Fu, Weixi Yi, Yipei Wang, Daniel C. Alexander, Rhodri H. Davies, Yipeng Hu
2025	J	`jnl`	Analysis of Image-and-Text Uncertainty Propagation in Multimodal Large Language Models with Cardiac MR-Based Applications. CoRR Yucheng Tang, Yunguan Fu, Weixi Yi, Yipei Wang, Daniel C. Alexander, Rhodri H. Davies, Yipeng Hu
2025	J	`jnl`	CE-LoRA: Computation-Efficient LoRA Fine-Tuning for Language Models. CoRR Guanduo Chen, Yutong He, Yipeng Hu, Kun Yuan, Binhang Yuan
2025	J	`jnl`	CineMA: A Foundation Model for Cine Cardiac MRI. CoRR Yunguan Fu, Weixi Yi, Charlotte Manisty, Anish N. Bhuva, Thomas A. Treibel, James C. Moon, Matthew J. Clarkson, Rhodri H. Davies, Yipeng Hu
2025	J	`jnl`	Competing for Pixels: A Self-Play Algorithm for Weakly-Supervised Semantic Segmentation. IEEE Trans. Pattern Anal. Mach. Intell. Shaheer U. Saeed, Shiqi Huang, João Ramalhinho, Iani J. M. B. Gayo, Nina Montaña Brown, Ester Bonmati, Stephen P. Pereira, Brian R. Davidson, Dean C. Barratt, Matthew J. Clarkson, Yipeng Hu
2025	J	`jnl`	Cryo-RL: automating prostate cancer cryoablation planning with reinforcement learning. CoRR Trixia Simangan, Ahmed Nadeem Abbasi, Yipeng Hu, Shaheer U. Saeed
2025	—	`conf`	Det-SAMReg: Few-Shot Medical Image Registration Using Vision Foundation Models. ASMUS@MICCAI Mengting Yang, Qilin Wang, Shiqi Huang, Wen Yan, Yipeng Hu, Zhe Min
2025	—	`conf`	Impact of Clinical Image Quality on Efficient Foundation Model Finetuning. EMA4MICCAI Yucheng Tang, Pawel Rajwa, Alexander Ng, Yipei Wang, Wen Yan, Natasha Thorley, Aqua Asif, Clare Allen, Louise Dickinson, Francesco Giganti, Shonit Punwani, Daniel C. Alexander, Veeru Kasivisvanathan, Yipeng Hu
2025	J	`jnl`	Impact of Clinical Image Quality on Efficient Foundation Model Finetuning. CoRR Yucheng Tang, Pawel Rajwa, Alexander Ng, Yipei Wang, Wen Yan, Natasha Thorley, Aqua Asif, Clare Allen, Louise Dickinson, Francesco Giganti, Shonit Punwani, Daniel C. Alexander, Veeru Kasivisvanathan, Yipeng Hu
2025	J	`jnl`	Learning to learn skill assessment for fetal ultrasound scanning. CoRR Yipei Wang, Qianye Yang, Lior Drukker, Aris T. Papageorghiou, Yipeng Hu, J. Alison Noble
2025	—	`conf`	Patient-Specific Radiomic Feature Selection with Reconstructed Healthy Persona of Knee MR Images. MICCAI (14) Yaxi Chen, Simin Ni, Shaheer U. Saeed, Aleksandra Ivanova, Rikin Hargunani, Jie Huang, Chaozong Liu, Yipeng Hu
2025	J	`jnl`	Patient-specific radiomic feature selection with reconstructed healthy persona of knee MR images. CoRR Yaxi Chen, Simin Ni, Aleksandra Ivanova, Shaheer U. Saeed, Rikin Hargunani, Jie Huang, Chaozong Liu, Yipeng Hu
2025	—	`conf`	Policy to Assist Iteratively Local Segmentation: Optimising Modality and Location Selection for Prostate Cancer Localisation. MLMI@MICCAI Xiangcen Wu, Shaheer U. Saeed, Yipei Wang, Ester Bonmati Coll, Yipeng Hu
2025	J	`jnl`	Policy to Assist Iteratively Local Segmentation: Optimising Modality and Location Selection for Prostate Cancer Localisation. CoRR Xiangcen Wu, Shaheer U. Saeed, Yipei Wang, Ester Bonmati Coll, Yipeng Hu
2025	—	`conf`	Promptable Cancer Segmentation Using Minimal Expert-Curated Data. MIUA (3) Lynn Karam, Yipei Wang, Veeru Kasivisvanathan, Mirabela Rusu, Yipeng Hu, Shaheer U. Saeed
2025	J	`jnl`	Promptable cancer segmentation using minimal expert-curated data. CoRR Lynn Karam, Yipei Wang, Veeru Kasivisvanathan, Mirabela Rusu, Yipeng Hu, Shaheer U. Saeed
2025	—	`conf`	Radiomic Fingerprints for Knee MR Image Assessment. iMIMIC@MICCAI Yaxi Chen, Simin Ni, Shaheer U. Saeed, Aleksandra Ivanova, Rikin Hargunani, Jie Huang, Chaozong Liu, Yipeng Hu
2025	J	`jnl`	Radiomic fingerprints for knee MR images assessment. CoRR Yaxi Chen, Simin Ni, Shaheer U. Saeed, Aleksandra Ivanova, Rikin Hargunani, Jie Huang, Chaozong Liu, Yipeng Hu
2025	J	`jnl`	Reasoning in machine vision: learning to think fast and slow. CoRR Shaheer U. Saeed, Yipei Wang, Veeru Kasivisvanathan, Brian R. Davidson, Matthew J. Clarkson, Yipeng Hu, Daniel C. Alexander
2025	—	`conf`	Register Anything: Estimating "Corresponding Prompts" for Segment Anything Model. MICCAI (4) Shiqi Huang, Tingfa Xu, Wen Yan, Dean C. Barratt, Yipeng Hu
2025	J	`jnl`	Register Anything: Estimating "Corresponding Prompts" for Segment Anything Model. CoRR Shiqi Huang, Tingfa Xu, Wen Yan, Dean C. Barratt, Yipeng Hu
2025	—	`conf`	SPARS: Self-Play Adversarial Reinforcement Learning for Segmentation of Liver Tumours. MIUA (3) Catalina Tan, Yipeng Hu, Shaheer U. Saeed
2025	J	`jnl`	SPARS: Self-Play Adversarial Reinforcement Learning for Segmentation of Liver Tumours. CoRR Catalina Tan, Yipeng Hu, Shaheer U. Saeed
2025	J	`jnl`	Segmentation versus detection: Development and evaluation of deep learning models for prostate imaging reporting and data system lesions localisation on Bi-parametric prostate magnetic resonance imaging. CAAI Trans. Intell. Technol. Zhe Min, Fernando J. Bianco, Qianye Yang, Wen Yan, Ziyi Shen, David Cohen, Rachael Rodell, Dean C. Barratt, Yipeng Hu
2025	A*	`conf`	Subspace Optimization for Large Language Models with Convergence Guarantees. ICML Yutong He, Pengrui Li, Yipeng Hu, Chuyan Chen, Kun Yuan
2025	—	`conf`	T2-Only Prostate Cancer Prediction by Meta-Learning from BI-Parametric MR Imaging. ISBI Weixi Yi, Yipei Wang, Natasha Thorley, Alexander Ng, Shonit Punwani, Veeru Kasivisvanathan, Dean C. Barratt, Shaheer U. Saeed, Yipeng Hu
2025	J	`jnl`	TUS-REC2024: A Challenge to Reconstruct 3D Freehand Ultrasound Without External Tracker. CoRR Qi Li, Shaheer U. Saeed, Yuliang Huang, Mingyuan Luo, Zhongnuo Yan, Jiongquan Chen, Xin Yang, Dong Ni, Nektarios Winter, Phuc Nguyen, Lucas Steinberger, Caelan Haney, Yuan Zhao, Mingjie Jiang, Bowen Ren, SiYeoul Lee, Seonho Kim, Minkyung Seo, Minwoo Kim, Yimeng Dou, Zhiwei Zhang, Yin Li, Tomy Varghese, Dean C. Barratt, Matthew J. Clarkson, Tom Vercauteren, Yipeng Hu
2025	—	`conf`	Tell2Reg: Establishing Spatial Correspondence between Images by the Same Language Prompts. ISBI Wen Yan, Qianye Yang, Shiqi Huang, Yipei Wang, Shonit Punwani, Mark Emberton, Vasilis Stavrinides, Yipeng Hu, Dean C. Barratt
2025	J	`jnl`	Tell2Reg: Establishing spatial correspondence between images by the same language prompts. CoRR Wen Yan, Qianye Yang, Shiqi Huang, Yipei Wang, Shonit Punwani, Mark Emberton, Vasilis Stavrinides, Yipeng Hu, Dean C. Barratt
2025	—	`conf`	The Impact of Biomechanical Quantities on PINNs-Based Medical Image Registration. ASMUS@MICCAI Shixing Ma, Zhaoxi Lin, Xinzhe Du, Yipeng Hu, Zhe Min
2025	J	`jnl`	Turbulence control in memristive neural network via adaptive magnetic flux based on DLS-ADMM technique. Neural Networks Qianming Ding, Yong Wu, Ying Xie, Yipeng Hu, Weifang Huang, Ya Jia
2024	J	`jnl`	AI-assisted prostate cancer detection and localisation on biparametric MR by classifying radiologist-positives. CoRR Xiangcen Wu, Yipei Wang, Qianye Yang, Natasha Thorley, Shonit Punwani, Veeru Kasivisvanathan, Ester Bonmati, Yipeng Hu
2024	J	`jnl`	Active learning using adaptable task-based prioritisation. Medical Image Anal. Shaheer U. Saeed, João Ramalhinho, Mark A. Pinnock, Ziyi Shen, Yunguan Fu, Nina Montaña Brown, Ester Bonmati, Dean C. Barratt, Stephen P. Pereira, Brian R. Davidson, Matthew J. Clarkson, Yipeng Hu
2024	—	`conf`	Biomechanics-Informed Non-rigid Medical Image Registration and its Inverse Material Property Estimation with Linear and Nonlinear Elasticity. MICCAI (2) Zhe Min, Zachary M. C. Baum, Shaheer U. Saeed, Mark Emberton, Dean C. Barratt, Zeike A. Taylor, Yipeng Hu
2024	J	`jnl`	Biomechanics-informed Non-rigid Medical Image Registration and its Inverse Material Property Estimation with Linear and Nonlinear Elasticity. CoRR Zhe Min, Zachary M. C. Baum, Shaheer U. Saeed, Mark Emberton, Dean C. Barratt, Zeike A. Taylor, Yipeng Hu
2024	J	`jnl`	CF-Loss: Clinically-relevant feature optimised loss function for retinal multi-class vessel segmentation and vascular feature measurement. Medical Image Anal. Yukun Zhou, Moucheng Xu, Yipeng Hu, Stefano B. Blumberg, An Zhao, Siegfried K. Wagner, Pearse A. Keane, Daniel C. Alexander
2024	J	`jnl`	Combiner and HyperCombiner networks: Rules to combine multimodality MR images for prostate cancer localisation. Medical Image Anal. Wen Yan, Bernard Chiu, Ziyi Shen, Qianye Yang, Tom Syer, Zhe Min, Shonit Punwani, Mark Emberton, David Atkinson, Dean C. Barratt, Yipeng Hu
2024	J	`jnl`	Competing for pixels: a self-play algorithm for weakly-supervised segmentation. CoRR Shaheer U. Saeed, Shiqi Huang, João Ramalhinho, Iani J. M. B. Gayo, Nina Montaña Brown, Ester Bonmati, Stephen P. Pereira, Brian R. Davidson, Dean C. Barratt, Matthew J. Clarkson, Yipeng Hu
2024	J	`jnl`	Evaluation of automated airway morphological quantification for assessing fibrosing lung disease. Comput. methods Biomech. Biomed. Eng. Imaging Vis. Ashkan Pakzad, Wing Keung Cheung, Coline H. M. Van Moorsel, Kin Quan, Nesrin Mogulkoc, Brian J. Bartholmai, H. W. Van Es, Alper Ezircan, Frouke Van Beek, Marcel Veltkamp, Ronald A. Karwoski, T. Peikert, R. D. Clay, Finbar Foley, Cassandra Braun, Recep Savas, Carole H. Sudre, Tom Doel, Daniel C. Alexander, Peter A. Wijeratne, Dave Hawkes, Yipeng Hu, John R. Hurst, Joseph Jacob
2024	J	`jnl`	Expectation maximisation pseudo labels. Medical Image Anal. Moucheng Xu, Yukun Zhou, Chen Jin, Marius de Groot, Daniel C. Alexander, Neil P. Oxtoby, Yipeng Hu, Joseph Jacob
2024	J	`jnl`	Interpolation-split: a data-centric deep learning approach with big interpolated data to boost airway segmentation performance. J. Big Data Wing Keung Cheung, Ashkan Pakzad, Nesrin Mogulkoc, Sarah Needleman, Bojidar Rangelov, Eyjolfur Gudmundsson, An Zhao, Mariam Abbas, Davina McLaverty, Dimitrios Asimakopoulos, Robert Chapman, Recep Savas, Sam M. Janes, Yipeng Hu, Daniel C. Alexander, John R. Hurst, Joseph Jacob
2024	J	`jnl`	Long-Term Dependency for 3D Reconstruction of Freehand Ultrasound Without External Tracker. IEEE Trans. Biomed. Eng. Qi Li, Ziyi Shen, Qian Li, Dean C. Barratt, Thomas Dowrick, Matthew J. Clarkson, Tom Vercauteren, Yipeng Hu
2024	—	`conf`	Nonrigid Reconstruction of Freehand Ultrasound Without a Tracker. MICCAI (4) Qi Li, Ziyi Shen, Qianye Yang, Dean C. Barratt, Matthew J. Clarkson, Tom Vercauteren, Yipeng Hu
2024	J	`jnl`	Nonrigid Reconstruction of Freehand Ultrasound without a Tracker. CoRR Qi Li, Ziyi Shen, Qianye Yang, Dean C. Barratt, Matthew J. Clarkson, Tom Vercauteren, Yipeng Hu
2024	—	`conf`	One Registration is Worth Two Segmentations. MICCAI (12) Shiqi Huang, Tingfa Xu, Ziyi Shen, Shaheer Ullah Saeed, Wen Yan, Dean C. Barratt, Yipeng Hu
2024	J	`jnl`	One registration is worth two segmentations. CoRR Shiqi Huang, Tingfa Xu, Ziyi Shen, Shaheer Ullah Saeed, Wen Yan, Dean C. Barratt, Yipeng Hu
2024	—	`conf`	Poisson Ordinal Network for Gleason Group Estimation Using Bi-Parametric MRI. MICCAI (5) Yinsong Xu, Yipei Wang, Ziyi Shen, Iani J. M. B. Gayo, Natasha Thorley, Shonit Punwani, Aidong Men, Dean C. Barratt, Qingchao Chen, Yipeng Hu
2024	J	`jnl`	Poisson Ordinal Network for Gleason Group Estimation Using Bi-Parametric MRI. CoRR Yinsong Xu, Yipei Wang, Ziyi Shen, Iani J. M. B. Gayo, Natasha Thorley, Shonit Punwani, Aidong Men, Dean C. Barratt, Qingchao Chen, Yipeng Hu
2024	J	`jnl`	SAMReg: SAM-enabled Image Registration with ROI-based Correspondence. CoRR Shiqi Huang, Tingfa Xu, Ziyi Shen, Shaheer Ullah Saeed, Wen Yan, Dean C. Barratt, Yipeng Hu
2024	—	`conf`	Segmentation by Registration-Enabled SAM Prompt Engineering Using Five Reference Images. WBIR Yaxi Chen, Aleksandra Ivanova, Shaheer U. Saeed, Rikin Hargunani, Jie Huang, Chaozong Liu, Yipeng Hu
2024	J	`jnl`	Segmentation by registration-enabled SAM prompt engineering using five reference images. CoRR Yaxi Chen, Aleksandra Ivanova, Shaheer U. Saeed, Rikin Hargunani, Jie Huang, Chaozong Liu, Yipeng Hu
2024	J	`jnl`	Semi-weakly-supervised neural network training for medical image registration. CoRR Yiwen Li, Yunguan Fu, Iani J. M. B. Gayo, Qianye Yang, Zhe Min, Shaheer U. Saeed, Wen Yan, Yipei Wang, J. Alison Noble, Mark Emberton, Matthew J. Clarkson, Dean C. Barratt, Victor Adrian Prisacariu, Yipeng Hu
2024	J	`jnl`	Subspace Optimization for Large Language Models with Convergence Guarantees. CoRR Yutong He, Pengrui Li, Yipeng Hu, Chuyan Chen, Kun Yuan
2024	J	`jnl`	T2-Only Prostate Cancer Prediction by Meta-Learning from Bi-Parametric MR Imaging. CoRR Weixi Yi, Yipei Wang, Natasha Thorley, Alexander Ng, Shonit Punwani, Veeru Kasivisvanathan, Dean C. Barratt, Shaheer Ullah Saeed, Yipeng Hu
2024	J	`jnl`	The distinct roles of reinforcement learning between pre-procedure and intra-procedure planning for prostate biopsy. Int. J. Comput. Assist. Radiol. Surg. Iani J. M. B. Gayo, Shaheer U. Saeed, Ester Bonmati, Dean C. Barratt, Matthew J. Clarkson, Yipeng Hu
2024	—	`conf`	Weakly Supervised Localisation of Prostate Cancer Using Reinforcement Learning for Bi-Parametric MR Images. ISBI Martynas Pocius, Wen Yan, Dean C. Barratt, Mark Emberton, Matthew J. Clarkson, Yipeng Hu, Shaheer U. Saeed
2024	J	`jnl`	Weakly supervised localisation of prostate cancer using reinforcement learning for bi-parametric MR images. CoRR Martynas Pocius, Wen Yan, Dean C. Barratt, Mark Emberton, Matthew J. Clarkson, Yipeng Hu, Shaheer U. Saeed
2023	J	`jnl`	A Recycling Training Strategy for Medical Image Segmentation with Diffusion Denoising Models. CoRR Yunguan Fu, Yiwen Li, Shaheer U. Saeed, Matthew J. Clarkson, Yipeng Hu
2023	J	`jnl`	A data-centric deep learning approach to airway segmentation. CoRR Wing Keung Cheung, Ashkan Pakzad, Nesrin Mogulkoc, Sarah Needleman, Bojidar Rangelov, Eyjolfur Gudmundsson, An Zhao, Mariam Abbas, Davina McLaverty, Dimitrios Asimakopoulos, Robert Chapman, Recep Savas, Sam M. Janes, Yipeng Hu, Daniel C. Alexander, John R. Hurst, Joseph Jacob
2023	—	`conf`	Bi-parametric prostate MR image synthesis using pathology and sequence-conditioned stable diffusion. MIDL Shaheer U. Saeed, Tom Syer, Wen Yan, Qianye Yang, Mark Emberton, Shonit Punwani, Matthew John Clarkson, Dean C. Barratt, Yipeng Hu
2023	J	`jnl`	Bi-parametric prostate MR image synthesis using pathology and sequence-conditioned stable diffusion. CoRR Shaheer U. Saeed, Tom Syer, Wen Yan, Qianye Yang, Mark Emberton, Shonit Punwani, Matthew J. Clarkson, Dean C. Barratt, Yipeng Hu
2023	—	`conf`	Boundary-RL: Reinforcement Learning for Weakly-Supervised Prostate Segmentation in TRUS Images. MLMI@MICCAI (1) Weixi Yi, Vasilis Stavrinides, Zachary M. C. Baum, Qianye Yang, Dean C. Barratt, Matthew J. Clarkson, Yipeng Hu, Shaheer U. Saeed
2023	J	`jnl`	Boundary-RL: Reinforcement Learning for Weakly-Supervised Prostate Segmentation in TRUS Images. CoRR Weixi Yi, Vasilis Stavrinides, Zachary M. C. Baum, Qianye Yang, Dean C. Barratt, Matthew J. Clarkson, Yipeng Hu, Shaheer U. Saeed
2023	J	`jnl`	Combiner and HyperCombiner Networks: Rules to Combine Multimodality MR Images for Prostate Cancer Localisation. CoRR Wen Yan, Bernard Chiu, Ziyi Shen, Qianye Yang, Tom Syer, Zhe Min, Shonit Punwani, Mark Emberton, David Atkinson, Dean C. Barratt, Yipeng Hu
2023	J	`jnl`	Expectation Maximization Pseudo Labelling for Segmentation with Limited Annotations. CoRR Mou-Cheng Xu, Yukun Zhou, Chen Jin, Marius de Groot, Daniel C. Alexander, Neil P. Oxtoby, Yipeng Hu, Joseph Jacob
2023	—	`conf`	Importance of Aligning Training Strategy with Evaluation for Diffusion Models in 3D Multiclass Segmentation. DGM4MICCAI Yunguan Fu, Yiwen Li, Shaheer U. Saeed, Matthew J. Clarkson, Yipeng Hu
2023	J	`jnl`	Importance of Aligning Training Strategy with Evaluation for Diffusion Models in 3D Multiclass Segmentation. CoRR Yunguan Fu, Yiwen Li, Shaheer U. Saeed, Matthew J. Clarkson, Yipeng Hu
2023	J	`jnl`	Long-term Dependency for 3D Reconstruction of Freehand Ultrasound Without External Tracker. CoRR Qi Li, Ziyi Shen, Qian Li, Dean C. Barratt, Thomas Dowrick, Matthew J. Clarkson, Tom Vercauteren, Yipeng Hu
2023	J	`jnl`	Meta-Learning Initializations for Interactive Medical Image Registration. IEEE Trans. Medical Imaging Zachary M. C. Baum, Yipeng Hu, Dean C. Barratt
2023	J	`jnl`	Multi-phase synthetic contrast enhancement in interventional computed tomography for guiding renal cryotherapy. Int. J. Comput. Assist. Radiol. Surg. Mark A. Pinnock, Yipeng Hu, Steve Bandula, Dean C. Barratt
2023	—	`conf`	Non-rigid Medical Image Registration using Physics-informed Neural Networks. IPMI Zhe Min, Zachary M. C. Baum, Shaheer U. Saeed, Mark Emberton, Dean C. Barratt, Zeike A. Taylor, Yipeng Hu
2023	J	`jnl`	Non-rigid Medical Image Registration using Physics-informed Neural Networks. CoRR Zhe Min, Zachary M. C. Baum, Shaheer U. Saeed, Mark Emberton, Dean C. Barratt, Zeike A. Taylor, Yipeng Hu
2023	—	`conf`	PLD-AL: Pseudo-label Divergence-Based Active Learning in Carotid Intima-Media Segmentation for Ultrasound Images. MICCAI (2) Yucheng Tang, Yipeng Hu, Jing Li, Hu Lin, Xiang Xu, Ke Huang, Hongxiang Lin
2023	—	`conf`	Privileged Anatomical and Protocol Discrimination in Trackerless 3D Ultrasound Reconstruction. ASMUS@MICCAI Qi Li, Ziyi Shen, Qian Li, Dean C. Barratt, Thomas Dowrick, Matthew J. Clarkson, Tom Vercauteren, Yipeng Hu
2023	J	`jnl`	Privileged Anatomical and Protocol Discrimination in Trackerless 3D Ultrasound Reconstruction. CoRR Qi Li, Ziyi Shen, Qian Li, Dean C. Barratt, Thomas Dowrick, Matthew J. Clarkson, Tom Vercauteren, Yipeng Hu
2023	J	`jnl`	Prototypical few-shot segmentation for cross-institution male pelvic structures with spatial registration. Medical Image Anal. Yiwen Li, Yunguan Fu, Iani J. M. B. Gayo, Qianye Yang, Zhe Min, Shaheer U. Saeed, Wen Yan, Yipei Wang, J. Alison Noble, Mark Emberton, Matthew J. Clarkson, Henkjan Huisman, Dean C. Barratt, Victor Adrian Prisacariu, Yipeng Hu
2023	A*	`conf`	SARAMIS: Simulation Assets for Robotic Assisted and Minimally Invasive Surgery. NeurIPS Nina Montaña Brown, Shaheer U. Saeed, Ahmed Abdulaal, Thomas Dowrick, Yakup Kilic, Sophie Wilkinson, Jack Gao, Meghavi Mashar, Chloe He, Alkisti Stavropoulou, Emma Thomson, Zachary M. C. Baum, Simone Foti, Brian R. Davidson, Yipeng Hu, Matthew J. Clarkson
2023	—	`conf`	Spatial Correspondence between Graph Neural Network-Segmented Images. MIDL Qian Li, Yunguan Fu, Qianye Yang, Zhijiang Du, Hongjian Yu, Yipeng Hu
2023	J	`jnl`	Spatial Correspondence between Graph Neural Network-Segmented Images. CoRR Qian Li, Yunguan Fu, Qianye Yang, Zhijiang Du, Hongjian Yu, Yipeng Hu
2023	—	`conf`	Trackerless Freehand Ultrasound with Sequence Modelling and Auxiliary Transformation Over Past and Future Frames. ISBI Qi Li, Ziyi Shen, Qian Li, Dean C. Barratt, Thomas Dowrick, Matthew J. Clarkson, Tom Vercauteren, Yipeng Hu
2022	J	`jnl`	Active learning using adaptable task-based prioritisation. CoRR Shaheer U. Saeed, João Ramalhinho, Mark A. Pinnock, Ziyi Shen, Yunguan Fu, Nina Montaña Brown, Ester Bonmati, Dean C. Barratt, Stephen P. Pereira, Brian R. Davidson, Matthew J. Clarkson, Yipeng Hu
2022	J	`jnl`	Bayesian Pseudo Labels: Expectation Maximization for Robust and Efficient Semi-Supervised Segmentation. CoRR Mou-Cheng Xu, Yukun Zhou, Chen Jin, Marius de Groot, Daniel C. Alexander, Neil P. Oxtoby, Yipeng Hu, Joseph Jacob
2022	—	`conf`	Bayesian Pseudo Labels: Expectation Maximization for Robust and Efficient Semi-supervised Segmentation. MICCAI (5) Mou-Cheng Xu, Yukun Zhou, Chen Jin, Marius de Groot, Daniel C. Alexander, Neil P. Oxtoby, Yipeng Hu, Joseph Jacob
2022	J	`jnl`	Collaborative Quantization Embeddings for Intra-Subject Prostate MR Image Registration. CoRR Ziyi Shen, Qianye Yang, Yuming Shen, Francesco Giganti, Vasilis Stavrinides, Richard E. Fan, Caroline M. Moore, Mirabela Rusu, Geoffrey A. Sonn, Philip H. S. Torr, Dean C. Barratt, Yipeng Hu
2022	—	`conf`	Collaborative Quantization Embeddings for Intra-subject Prostate MR Image Registration. MICCAI (6) Ziyi Shen, Qianye Yang, Yuming Shen, Francesco Giganti, Vasilis Stavrinides, Richard E. Fan, Caroline M. Moore, Mirabela Rusu, Geoffrey A. Sonn, Philip H. S. Torr, Dean C. Barratt, Yipeng Hu
2022	J	`jnl`	Cross-Modality Image Registration Using a Training-Time Privileged Third Modality. IEEE Trans. Medical Imaging Qianye Yang, David Atkinson, Yunguan Fu, Tom Syer, Wen Yan, Shonit Punwani, Matthew J. Clarkson, Dean C. Barratt, Tom Vercauteren, Yipeng Hu
2022	J	`jnl`	Cross-Modality Image Registration using a Training-Time Privileged Third Modality. CoRR Qianye Yang, David Atkinson, Yunguan Fu, Tom Syer, Wen Yan, Shonit Punwani, Matthew J. Clarkson, Dean C. Barratt, Tom Vercauteren, Yipeng Hu
2022	J	`jnl`	Deep hashing for global registration of untracked 2D laparoscopic ultrasound to CT. Int. J. Comput. Assist. Radiol. Surg. João Ramalhinho, Bongjin Koo, Nina Montaña Brown, Shaheer U. Saeed, Ester Bonmati, Kurinchi Gurusamy, Stephen P. Pereira, Brian R. Davidson, Yipeng Hu, Matthew J. Clarkson
2022	J	`jnl`	Domain Generalization for Prostate Segmentation in Transrectal Ultrasound Images: A Multi-center Study. CoRR Sulaiman Vesal, Iani J. M. B. Gayo, Indrani Bhattacharya, Shyam Natarajan, Leonard S. Marks, Dean C. Barratt, Richard E. Fan, Yipeng Hu, Geoffrey A. Sonn, Mirabela Rusu
2022	J	`jnl`	Domain generalization for prostate segmentation in transrectal ultrasound images: A multi-center study. Medical Image Anal. Sulaiman Vesal, Iani J. M. B. Gayo, Indrani Bhattacharya, Shyam Natarajan, Leonard S. Marks, Dean C. Barratt, Richard E. Fan, Yipeng Hu, Geoffrey A. Sonn, Mirabela Rusu
2022	—	`conf`	FEW-SHOT Image Segmentation for Cross-Institution Male Pelvic Organs Using Registration-Assisted Prototypical Learning. ISBI Yiwen Li, Yunguan Fu, Qianye Yang, Zhe Min, Wen Yan, Henkjan J. Huisman, Dean C. Barratt, Victor Adrian Prisacariu, Yipeng Hu
2022	J	`jnl`	Few-shot image segmentation for cross-institution male pelvic organs using registration-assisted prototypical learning. CoRR Yiwen Li, Yunguan Fu, Qianye Yang, Zhe Min, Wen Yan, Henkjan J. Huisman, Dean C. Barratt, Victor Adrian Prisacariu, Yipeng Hu
2022	J	`jnl`	Image quality assessment by overlapping task-specific and task-agnostic measures: application to prostate multiparametric MR images for cancer segmentation. CoRR Shaheer U. Saeed, Wen Yan, Yunguan Fu, Francesco Giganti, Qianye Yang, Zachary M. C. Baum, Mirabela Rusu, Richard E. Fan, Geoffrey A. Sonn, Mark Emberton, Dean C. Barratt, Yipeng Hu
2022	J	`jnl`	Image quality assessment for machine learning tasks using meta-reinforcement learning. CoRR Shaheer U. Saeed, Yunguan Fu, Vasilis Stavrinides, Zachary M. C. Baum, Qianye Yang, Mirabela Rusu, Richard E. Fan, Geoffrey A. Sonn, J. Alison Noble, Dean C. Barratt, Yipeng Hu
2022	J	`jnl`	Image quality assessment for machine learning tasks using meta-reinforcement learning. Medical Image Anal. Shaheer U. Saeed, Yunguan Fu, Vasilis Stavrinides, Zachary M. C. Baum, Qianye Yang, Mirabela Rusu, Richard E. Fan, Geoffrey A. Sonn, J. Alison Noble, Dean C. Barratt, Yipeng Hu
2022	J	`jnl`	Learning Generalized Non-Rigid Multimodal Biomedical Image Registration from Generic Point Set Data. CoRR Zachary M. C. Baum, Tamas Ungi, Christopher Schlenger, Yipeng Hu, Dean C. Barratt
2022	—	`conf`	Learning Generalized Non-rigid Multimodal Biomedical Image Registration from Generic Point Set Data. ASMUS@MICCAI Zachary M. C. Baum, Tamas Ungi, Christopher Schlenger, Yipeng Hu, Dean C. Barratt
2022	J	`jnl`	MONAI: An open-source framework for deep learning in healthcare. CoRR M. Jorge Cardoso, Wenqi Li, Richard Brown, Nic Ma, Eric Kerfoot, Yiheng Wang, Benjamin Murray, Andriy Myronenko, Can Zhao, Dong Yang, Vishwesh Nath, Yufan He, Ziyue Xu, Ali Hatamizadeh, Wentao Zhu, Yun Liu, Mingxin Zheng, Yucheng Tang, Isaac Yang, Michael Zephyr, Behrooz Hashemian, Sachidanand Alle, Mohammad Zalbagi Darestani, Charlie Budd, Marc Modat, Tom Vercauteren, Guotai Wang, Yiwen Li, Yipeng Hu, Yunguan Fu, Benjamin Gorman, Hans J. Johnson, Brad W. Genereaux, Barbaros S. Erdal, Vikash Gupta, Andres Diaz-Pinto, Andre Dourson, Lena Maier-Hein, Paul F. Jaeger, Michael Baumgartner, Jayashree Kalpathy-Cramer, Mona Flores, Justin S. Kirby, Lee A. D. Cooper, Holger R. Roth, Daguang Xu, David Bericat, Ralf Floca, S. Kevin Zhou, Haris Shuaib, Keyvan Farahani, Klaus H. Maier-Hein, Stephen R. Aylward, Prerna Dogra, Sébastien Ourselin, Andrew Feng
2022	J	`jnl`	Meta-Learning Initializations for Interactive Medical Image Registration. CoRR Zachary M. C. Baum, Yipeng Hu, Dean C. Barratt
2022	J	`jnl`	Meta-Registration: Learning Test-Time Optimization for Single-Pair Image Registration. CoRR Zachary M. C. Baum, Yipeng Hu, Dean C. Barratt
2022	—	`conf`	Meta-registration: Learning Test-Time Optimization for Single-Pair Image Registration. ASMUS@MICCAI Zachary M. C. Baum, Yipeng Hu, Dean C. Barratt
2022	—	`conf`	Optimising Chest X-Rays for Image Analysis by Identifying and Removing Confounding Factors. MICAD Shahab Aslani, Watjana Lilaonitkul, Vaishnavi Gnanananthan, Divya Raj, Bojidar Rangelov, Alexandra L. Young, Yipeng Hu, Paul Taylor, Daniel C. Alexander, Joseph Jacob
2022	J	`jnl`	Optimising Chest X-Rays for Image Analysis by Identifying and Removing Confounding Factors. CoRR Shahab Aslani, Watjana Lilaonitkul, Vaishnavi Gnanananthan, Divya Raj, Bojidar Rangelov, Alexandra L. Young, Yipeng Hu, Paul Taylor, Daniel C. Alexander, Joseph Jacob
2022	J	`jnl`	Prototypical few-shot segmentation for cross-institution male pelvic structures with spatial registration. CoRR Yiwen Li, Yunguan Fu, Iani J. M. B. Gayo, Qianye Yang, Zhe Min, Shaheer U. Saeed, Wen Yan, Yipei Wang, J. Alison Noble, Mark Emberton, Matthew J. Clarkson, Henkjan J. Huisman, Dean C. Barratt, Victor Adrian Prisacariu, Yipeng Hu
2022	—	`conf`	Rapid Lung Ultrasound COVID-19 Severity Scoring with Resource-Efficient Deep Feature Extraction. ASMUS@MICCAI Pierre Raillard, Lorenzo Cristoni, Andrew Walden, Roberto Lazzari, Thomas Pulimood, Louis Grandjean, Claudia A. M. Gandini Wheeler-Kingshott, Yipeng Hu, Zachary M. C. Baum
2022	J	`jnl`	Rapid Lung Ultrasound COVID-19 Severity Scoring with Resource-Efficient Deep Feature Extraction. CoRR Pierre Raillard, Lorenzo Cristoni, Andrew Walden, Roberto Lazzari, Thomas Pulimood, Louis Grandjean, Claudia A. M. Gandini Wheeler-Kingshott, Yipeng Hu, Zachary M. C. Baum
2022	—	`ed.`	Simplifying Medical Ultrasound - Third International Workshop, ASMUS 2022, Held in Conjunction with MICCAI 2022, Singapore, September 18, 2022, Proceedings ASMUS@MICCAI Stephen R. Aylward, J. Alison Noble, Yipeng Hu, Su-Lin Lee, Zachary Baum, Zhe Min
2022	—	`conf`	Strategising Template-Guided Needle Placement for MR-targeted Prostate Biopsy. CaPTion@MICCAI Iani J. M. B. Gayo, Shaheer U. Saeed, Dean C. Barratt, Matthew J. Clarkson, Yipeng Hu
2022	J	`jnl`	Strategising template-guided needle placement for MR-targeted prostate biopsy. CoRR Iani J. M. B. Gayo, Shaheer U. Saeed, Dean C. Barratt, Matthew J. Clarkson, Yipeng Hu
2022	J	`jnl`	Task model-specific operator skill assessment in routine fetal ultrasound scanning. Int. J. Comput. Assist. Radiol. Surg. Yipei Wang, Qianye Yang, Lior Drukker, Aris T. Papageorghiou, Yipeng Hu, J. Alison Noble
2022	—	`conf`	The Impact of Using Voxel-Level Segmentation Metrics on Evaluating Multifocal Prostate Cancer Localisation. AMAI@MICCAI Wen Yan, Qianye Yang, Tom Syer, Zhe Min, Shonit Punwani, Mark Emberton, Dean C. Barratt, Bernard Chiu, Yipeng Hu
2022	J	`jnl`	The impact of using voxel-level segmentation metrics on evaluating multifocal prostate cancer localisation. CoRR Wen Yan, Qianye Yang, Tom Syer, Zhe Min, Shonit Punwani, Mark Emberton, Dean C. Barratt, Bernard Chiu, Yipeng Hu
2022	—	`conf`	Towards Multi-modal Self-supervised Video and Ultrasound Pose Estimation for Laparoscopic Liver Surgery. ASMUS@MICCAI Nina Montaña Brown, João Ramalhinho, Bongjin Koo, Moustafa Allam, Brian R. Davidson, Kurinchi Gurusamy, Yipeng Hu, Matthew J. Clarkson
2022	J	`jnl`	Trackerless freehand ultrasound with sequence modelling and auxiliary transformation over past and future frames. CoRR Qi Li, Ziyi Shen, Qian Li, Dean C. Barratt, Thomas Dowrick, Matthew J. Clarkson, Tom Vercauteren, Yipeng Hu
2022	J	`jnl`	VAFO-Loss: VAscular Feature Optimised Loss Function for Retinal Artery/Vein Segmentation. CoRR Yukun Zhou, Moucheng Xu, Yipeng Hu, Stefano B. Blumberg, An Zhao, Siegfried K. Wagner, Pearse A. Keane, Daniel C. Alexander
2022	J	`jnl`	Voice-Assisted Image Labeling for Endoscopic Ultrasound Classification Using Neural Networks. IEEE Trans. Medical Imaging Ester Bonmati, Yipeng Hu, Alexander Grimwood, Gavin J. Johnson, George Goodchild, Margaret G. Keane, Kurinchi Gurusamy, Brian R. Davidson, Matthew J. Clarkson, Stephen P. Pereira, Dean C. Barratt
2021	J	`jnl`	AI reflections in 2020. Nat. Mach. Intell. Anna Jobin, Kingson Man, Antonio Damasio, Georgios Kaissis, Rickmer Braren, Julia Stoyanovich, Jay J. Van Bavel, Tessa V. West, Brent D. Mittelstadt, Jason Eshraghian, Marta R. Costa-jussà, Asaf Tzachor, Aimun A. B. Jamjoom, Mariarosaria Taddeo, Edoardo Sinibaldi, Yipeng Hu, Miguel A. Luengo-Oroz
2021	—	`conf`	Adaptable Image Quality Assessment Using Meta-Reinforcement Learning of Task Amenability. ASMUS@MICCAI Shaheer U. Saeed, Yunguan Fu, Vasilis Stavrinides, Zachary M. C. Baum, Qianye Yang, Mirabela Rusu, Richard E. Fan, Geoffrey A. Sonn, J. Alison Noble, Dean C. Barratt, Yipeng Hu
2021	J	`jnl`	Adaptable image quality assessment using meta-reinforcement learning of task amenability. CoRR Shaheer U. Saeed, Yunguan Fu, Vasilis Stavrinides, Zachary M. C. Baum, Qianye Yang, Mirabela Rusu, Richard E. Fan, Geoffrey A. Sonn, J. Alison Noble, Dean C. Barratt, Yipeng Hu
2021	B	`conf`	Combined 3D super-resolution, de-noising and partial volume correction for percutaneous ablation. Image Processing Mark A. Pinnock, Yipeng Hu, Steve Bandula, Dean C. Barratt
2021	—	`conf`	Controlling False Positive/Negative Rates for Deep-Learning-Based Prostate Cancer Detection on Multiparametric MR Images. MIUA Zhe Min, Fernando J. Bianco, Qianye Yang, Rachael Rodell, Wen Yan, Dean C. Barratt, Yipeng Hu
2021	J	`jnl`	Controlling False Positive/Negative Rates for Deep-Learning-Based Prostate Cancer Detection on Multiparametric MR images. CoRR Zhe Min, Fernando J. Bianco, Qianye Yang, Rachael Rodell, Wen Yan, Dean C. Barratt, Yipeng Hu
2021	—	`conf`	Development and Evaluation of Intraoperative Ultrasound Segmentation with Negative Image Frames and Multiple Observer Labels. ASMUS@MICCAI Liam F. Chalcroft, Jiongqi Qu, Sophie A. Martin, Iani J. M. B. Gayo, Giulio V. Minore, Imraj R. D. Singh, Shaheer U. Saeed, Qianye Yang, Zachary M. C. Baum, André Altmann, Yipeng Hu
2021	J	`jnl`	Development and evaluation of intraoperative ultrasound segmentation with negative image frames and multiple observer labels. CoRR Liam F. Chalcroft, Jiongqi Qu, Sophie A. Martin, Iani J. M. B. Gayo, Giulio V. Minore, Imraj R. D. Singh, Shaheer U. Saeed, Qianye Yang, Zachary M. C. Baum, André Altmann, Yipeng Hu
2021	—	`conf`	End-to-end forecasting of needle trajectory in percutaneous ablation. Image-Guided Procedures Mark A. Pinnock, Yipeng Hu, Steve Bandula, Dean C. Barratt
2021	—	`conf`	Endoscopic Ultrasound Image Synthesis Using a Cycle-Consistent Adversarial Network. ASMUS@MICCAI Alexander Grimwood, João Ramalhinho, Zachary M. C. Baum, Nina Montaña Brown, Gavin J. Johnson, Yipeng Hu, Matthew J. Clarkson, Stephen P. Pereira, Dean C. Barratt, Ester Bonmati
2021	J	`jnl`	Evaluation of automated airway morphological quantification for assessing fibrosing lung disease. CoRR Ashkan Pakzad, Wing Keung Cheung, Kin Quan, Nesrin Mogulkoc, Coline H. M. Van Moorsel, Brian J. Bartholmai, Hendrik W. Van Es, Alper Ezircan, Frouke Van Beek, Marcel Veltkamp, Ronald A. Karwoski, Tobias Peikert, Ryan D. Clay, Finbar Foley, Cassandra Braun, Recep Savas, Carole H. Sudre, Tom Doel, Daniel C. Alexander, Peter A. Wijeratne, David J. Hawkes, Yipeng Hu, John R. Hurst, Joseph Jacob
2021	A	`conf`	Few-shot Semantic Segmentation with Self-supervision from Pseudo-classes. BMVC Yiwen Li, Gratianus Wesley Putra Data, Yunguan Fu, Yipeng Hu, Victor Adrian Prisacariu
2021	J	`jnl`	Few-shot Semantic Segmentation with Self-supervision from Pseudo-classes. CoRR Yiwen Li, Gratianus Wesley Putra Data, Yunguan Fu, Yipeng Hu, Victor Adrian Prisacariu
2021	—	`conf`	Image quality assessment for closed-loop computer-assisted lung ultrasound. Image-Guided Procedures Zachary M. C. Baum, Ester Bonmati, Lorenzo Cristoni, Andrew Walden, Ferran Prados, Baris Kanber, Dean C. Barratt, David J. Hawkes, Geoff J. M. Parker, Claudia A. M. Gandini Wheeler-Kingshott, Yipeng Hu
2021	—	`conf`	Learning Image Quality Assessment by Reinforcing Task Amenable Data Selection. IPMI Shaheer U. Saeed, Yunguan Fu, Zachary M. C. Baum, Qianye Yang, Mirabela Rusu, Richard E. Fan, Geoffrey A. Sonn, Dean C. Barratt, Yipeng Hu
2021	J	`jnl`	Learning image quality assessment by reinforcing task amenable data selection. CoRR Shaheer U. Saeed, Yunguan Fu, Zachary M. C. Baum, Qianye Yang, Mirabela Rusu, Richard E. Fan, Geoffrey A. Sonn, Dean C. Barratt, Yipeng Hu
2021	—	`conf`	Learning to Address Intra-segment Misclassification in Retinal Imaging. MICCAI (1) Yukun Zhou, Moucheng Xu, Yipeng Hu, Hongxiang Lin, Joseph Jacob, Pearse A. Keane, Daniel C. Alexander
2021	J	`jnl`	Learning to Address Intra-segment Misclassification in Retinal Imaging. CoRR Yukun Zhou, Moucheng Xu, Yipeng Hu, Hongxiang Lin, Joseph Jacob, Pearse A. Keane, Daniel C. Alexander
2021	—	`conf`	Lung Ultrasound Segmentation and Adaptation Between COVID-19 and Community-Acquired Pneumonia. ASMUS@MICCAI Harry Mason, Lorenzo Cristoni, Andrew Walden, Roberto Lazzari, Thomas Pulimood, Louis Grandjean, Claudia A. M. Gandini Wheeler-Kingshott, Yipeng Hu, Zachary M. C. Baum
2021	J	`jnl`	Lung Ultrasound Segmentation and Adaptation between COVID-19 and Community-Acquired Pneumonia. CoRR Harry Mason, Lorenzo Cristoni, Andrew Walden, Roberto Lazzari, Thomas Pulimood, Louis Grandjean, Claudia A. M. Gandini Wheeler-Kingshott, Yipeng Hu, Zachary M. C. Baum
2021	—	`conf`	Morphological Change Forecasting For Prostate Glands Using Feature-Based Registration And Kernel Density Extrapolation. ISBI Qianye Yang, Tom Vercauteren, Yunguan Fu, Francesco Giganti, Nooshin Ghavami, Vasilis Stavrinides, Caroline M. Moore, Matthew J. Clarkson, Dean C. Barratt, Yipeng Hu
2021	J	`jnl`	Morphological Change Forecasting for Prostate Glands using Feature-based Registration and Kernel Density Extrapolation. CoRR Qianye Yang, Tom Vercauteren, Yunguan Fu, Francesco Giganti, Nooshin Ghavami, Vasilis Stavrinides, Caroline M. Moore, Matthew J. Clarkson, Dean C. Barratt, Yipeng Hu
2021	J	`jnl`	Real-time multimodal image registration with partial intraoperative point-set data. CoRR Zachary M. C. Baum, Yipeng Hu, Dean C. Barratt
2021	J	`jnl`	Real-time multimodal image registration with partial intraoperative point-set data. Medical Image Anal. Zachary M. C. Baum, Yipeng Hu, Dean C. Barratt
2021	—	`ed.`	Simplifying Medical Ultrasound - Second International Workshop, ASMUS 2021, Held in Conjunction with MICCAI 2021, Strasbourg, France, September 27, 2021, Proceedings ASMUS@MICCAI J. Alison Noble, Stephen R. Aylward, Alexander Grimwood, Zhe Min, Su-Lin Lee, Yipeng Hu
2021	J	`jnl`	Vessel segmentation for automatic registration of untracked laparoscopic ultrasound to CT of the liver. Int. J. Comput. Assist. Radiol. Surg. Nina Montaña Brown, João Ramalhinho, Moustafa Allam, Brian R. Davidson, Yipeng Hu, Matthew J. Clarkson
2021	J	`jnl`	Voice-assisted Image Labelling for Endoscopic Ultrasound Classification using Neural Networks. CoRR Ester Bonmati, Yipeng Hu, Alexander Grimwood, Gavin J. Johnson, George Goodchild, Margaret G. Keane, Kurinchi Gurusamy, Brian R. Davidson, Matthew J. Clarkson, Stephen P. Pereira, Dean C. Barratt
2020	—	`conf`	An Unsupervised Approach to Ultrasound Elastography with End-to-end Strain Regularisation. MICCAI (3) Rémi Delaunay, Yipeng Hu, Tom Vercauteren
2020	—	`conf`	Assisted Probe Positioning for Ultrasound Guided Radiotherapy Using Image Sequence Classification. MICCAI (3) Alex Grimwood, Helen McNair, Yipeng Hu, Ester Bonmati, Dean C. Barratt, Emma J. Harris
2020	J	`jnl`	Assisted Probe Positioning for Ultrasound Guided Radiotherapy Using Image Sequence Classification. CoRR Alexander Grimwood, Helen McNair, Yipeng Hu, Ester Bonmati, Dean C. Barratt, Emma J. Harris
2020	—	`conf`	Cross-Device Cross-Anatomy Adaptation Network for Ultrasound Video Analysis. ASMUS/PIPPI@MICCAI Qingchao Chen, Yang Liu, Yipeng Hu, Alice Self, Aris T. Papageorghiou, J. Alison Noble
2020	J	`jnl`	DeepReg: a deep learning toolkit for medical image registration. CoRR Yunguan Fu, Nina Montaña Brown, Shaheer U. Saeed, Adrià Casamitjana, Zachary M. C. Baum, Rémi Delaunay, Qianye Yang, Alexander Grimwood, Zhe Min, Stefano B. Blumberg, Juan Eugenio Iglesias, Dean C. Barratt, Ester Bonmati, Daniel C. Alexander, Matthew J. Clarkson, Tom Vercauteren, Yipeng Hu
2020	J	`jnl`	DeepReg: a deep learning toolkit for medical image registration. J. Open Source Softw. Yunguan Fu, Nina Montaña Brown, Shaheer U. Saeed, Adrià Casamitjana, Zachary Baum, Rémi Delaunay, Qianye Yang, Alexander Grimwood, Zhe Min, Stefano B. Blumberg, Juan Eugenio Iglesias, Dean C. Barratt, Ester Bonmati, Daniel C. Alexander, Matthew J. Clarkson, Tom Vercauteren, Yipeng Hu
2020	J	`jnl`	Image quality assessment for closed-loop computer-assisted lung ultrasound. CoRR Zachary M. C. Baum, Ester Bonmati, Lorenzo Cristoni, Andrew Walden, Ferran Prados, Baris Kanber, Dean C. Barratt, David J. Hawkes, Geoffrey J. M. Parker, Claudia A. M. Gandini Wheeler-Kingshott, Yipeng Hu
2020	J	`jnl`	Introduction to Medical Image Registration with DeepReg, Between Old and New. CoRR Nina Montaña Brown, Yunguan Fu, Shaheer U. Saeed, Adrià Casamitjana, Zachary M. C. Baum, Rémi Delaunay, Qianye Yang, Alex Grimwood, Zhe Min, Ester Bonmati, Tom Vercauteren, Matthew J. Clarkson, Yipeng Hu
2020	—	`conf`	Longitudinal Image Registration with Temporal-Order and Subject-Specificity Discrimination. MICCAI (3) Qianye Yang, Yunguan Fu, Francesco Giganti, Nooshin Ghavami, Qingchao Chen, J. Alison Noble, Tom Vercauteren, Dean C. Barratt, Yipeng Hu
2020	J	`jnl`	Longitudinal Image Registration with Temporal-order and Subject-specificity Discrimination. CoRR Qianye Yang, Yunguan Fu, Francesco Giganti, Nooshin Ghavami, Qingchao Chen, J. Alison Noble, Tom Vercauteren, Dean C. Barratt, Yipeng Hu
2020	—	`ed.`	Medical Ultrasound, and Preterm, Perinatal and Paediatric Image Analysis - First International Workshop, ASMUS 2020, and 5th International Workshop, PIPPI 2020, Held in Conjunction with MICCAI 2020, Lima, Peru, October 4-8, 2020, Proceedings ASMUS/PIPPI@MICCAI Yipeng Hu, Roxane Licandro, J. Alison Noble, Jana Hutter, Stephen R. Aylward, Andrew Melbourne, Esra Abaci Turk, Jordina Torrents-Barrena
2020	—	`conf`	Multimodality Biomedical Image Registration Using Free Point Transformer Networks. ASMUS/PIPPI@MICCAI Zachary M. C. Baum, Yipeng Hu, Dean C. Barratt
2020	J	`jnl`	Multimodality Biomedical Image Registration using Free Point Transformer Networks. CoRR Zachary M. C. Baum, Yipeng Hu, Dean C. Barratt
2020	—	`conf`	Prostate Motion Modelling Using Biomechanically-Trained Deep Neural Networks on Unstructured Nodes. MICCAI (4) Shaheer U. Saeed, Zeike A. Taylor, Mark A. Pinnock, Mark Emberton, Dean C. Barratt, Yipeng Hu
2020	J	`jnl`	Prostate motion modelling using biomechanically-trained deep neural networks on unstructured nodes. CoRR Shaheer U. Saeed, Zeike A. Taylor, Mark A. Pinnock, Mark Emberton, Dean C. Barratt, Yipeng Hu
2020	J	`jnl`	The challenges of deploying artificial intelligence models in a rapidly evolving pandemic. CoRR Yipeng Hu, Joseph Jacob, Geoffrey J. M. Parker, David J. Hawkes, John R. Hurst, Danail Stoyanov
2020	J	`jnl`	The challenges of deploying artificial intelligence models in a rapidly evolving pandemic. Nat. Mach. Intell. Yipeng Hu, Joseph Jacob, Geoffrey J. M. Parker, David J. Hawkes, John R. Hurst, Danail Stoyanov
2019	J	`jnl`	Automatic segmentation of prostate MRI using convolutional neural networks: Investigating the impact of network architecture on the accuracy of volume measurement and MRI-ultrasound registration. Medical Image Anal. Nooshin Ghavami, Yipeng Hu, Eli Gibson, Ester Bonmati, Mark Emberton, Caroline M. Moore, Dean C. Barratt
2019	—	`conf`	Conditional Segmentation in Lieu of Image Registration. MICCAI (2) Yipeng Hu, Eli Gibson, Dean C. Barratt, Mark Emberton, J. Alison Noble, Tom Vercauteren
2019	J	`jnl`	Conditional Segmentation in Lieu of Image Registration. CoRR Yipeng Hu, Eli Gibson, Dean C. Barratt, Mark Emberton, J. Alison Noble, Tom Vercauteren
2019	—	`conf`	More Unlabelled Data or Label More Data? A Study on Semi-supervised Laparoscopic Image Segmentation. DART/MIL3ID@MICCAI Yunguan Fu, Maria R. Robu, Bongjin Koo, Crispin Schneider, Stijn van Laarhoven, Danail Stoyanov, Brian R. Davidson, Matthew J. Clarkson, Yipeng Hu
2019	J	`jnl`	More unlabelled data or label more data? A study on semi-supervised laparoscopic image segmentation. CoRR Yunguan Fu, Maria R. Robu, Bongjin Koo, Crispin Schneider, Stijn van Laarhoven, Danail Stoyanov, Brian R. Davidson, Matthew J. Clarkson, Yipeng Hu
2018	—	`conf`	Adversarial Deformation Regularization for Training Image Registration Neural Networks. MICCAI (1) Yipeng Hu, Eli Gibson, Nooshin Ghavami, Ester Bonmati, Caroline M. Moore, Mark Emberton, Tom Vercauteren, J. Alison Noble, Dean C. Barratt
2018	J	`jnl`	Adversarial Deformation Regularization for Training Image Registration Neural Networks. CoRR Yipeng Hu, Eli Gibson, Nooshin Ghavami, Ester Bonmati, Caroline M. Moore, Mark Emberton, Tom Vercauteren, J. Alison Noble, Dean C. Barratt
2018	J	`jnl`	Automatic Multi-Organ Segmentation on Abdominal CT With Dense V-Networks. IEEE Trans. Medical Imaging Eli Gibson, Francesco Giganti, Yipeng Hu, Ester Bonmati, Steve Bandula, Kurinchi Gurusamy, Brian R. Davidson, Stephen P. Pereira, Matthew J. Clarkson, Dean C. Barratt
2018	—	`conf`	Automatic slice segmentation of intraoperative transrectal ultrasound images using convolutional neural networks. Image-Guided Procedures Nooshin Ghavami, Yipeng Hu, Ester Bonmati, Rachael Rodell, Eli Gibson, Caroline M. Moore, Dean C. Barratt
2018	J	`jnl`	Determination of optimal ultrasound planes for the initialisation of image registration during endoscopic ultrasound-guided procedures. Int. J. Comput. Assist. Radiol. Surg. Ester Bonmati, Yipeng Hu, Eli Gibson, Laura Uribarri, Geri Keane, Kurinchi Gurusamy, Brian R. Davidson, Stephen P. Pereira, Matthew J. Clarkson, Dean C. Barratt
2018	—	`conf`	Inter-site Variability in Prostate Segmentation Accuracy Using Deep Learning. MICCAI (4) Eli Gibson, Yipeng Hu, Nooshin Ghavami, Hashim Uddin Ahmed, Caroline M. Moore, Mark Emberton, Henkjan J. Huisman, Dean C. Barratt
2018	—	`conf`	Label-driven weakly-supervised learning for multimodal deformarle image registration. ISBI Yipeng Hu, Marc Modat, Eli Gibson, Nooshin Ghavami, Ester Bonmati, Caroline M. Moore, Mark Emberton, J. Alison Noble, Dean C. Barratt, Tom Vercauteren
2018	J	`jnl`	NiftyNet: a deep-learning platform for medical imaging. Comput. Methods Programs Biomed. Eli Gibson, Wenqi Li, Carole H. Sudre, Lucas Fidon, Dzhoshkun I. Shakir, Guotai Wang, Zach Eaton-Rosen, Robert J. Gray, Tom Doel, Yipeng Hu, Tom Whyntie, Parashkev Nachev, Marc Modat, Dean C. Barratt, Sébastien Ourselin, M. Jorge Cardoso, Tom Vercauteren
2018	—	`conf`	Technical note: automatic segmentation method of pelvic floor levator hiatus in ultrasound using a self-normalising neural network. Image-Guided Procedures Ester Bonmati, Yipeng Hu, Nikhil Sindhwani, Hans Peter Dietz, Jan D'hooge, Dean C. Barratt, Jan Deprest, Tom Vercauteren
2018	J	`jnl`	Weakly-Supervised Convolutional Neural Networks for Multimodal Image Registration. CoRR Yipeng Hu, Marc Modat, Eli Gibson, Wenqi Li, Nooshin Ghavami, Ester Bonmati, Guotai Wang, Steven Bandula, Caroline M. Moore, Mark Emberton, Sébastien Ourselin, J. Alison Noble, Dean C. Barratt, Tom Vercauteren
2018	J	`jnl`	Weakly-supervised convolutional neural networks for multimodal image registration. Medical Image Anal. Yipeng Hu, Marc Modat, Eli Gibson, Wenqi Li, Nooshin Ghavami, Ester Bonmati, Guotai Wang, Steven Bandula, Caroline M. Moore, Mark Emberton, Sébastien Ourselin, J. Alison Noble, Dean C. Barratt, Tom Vercauteren
2017	J	`jnl`	Automatic segmentation method of pelvic floor levator hiatus in ultrasound using a self-normalising neural network. CoRR Ester Bonmati, Yipeng Hu, Nikhil Sindhwani, Hans Peter Dietz, Jan D'hooge, Dean C. Barratt, Jan Deprest, Tom Vercauteren
2017	J	`jnl`	Designing image segmentation studies: Statistical power, sample size and reference standard quality. Medical Image Anal. Eli Gibson, Yipeng Hu, Henkjan J. Huisman, Dean C. Barratt
2017	J	`jnl`	Development and Phantom Validation of a 3-D-Ultrasound-Guided System for Targeting MRI-Visible Lesions During Transrectal Prostate Biopsy. IEEE Trans. Biomed. Eng. Yipeng Hu, Veeru Kasivisvanathan, Lucy A. M. Simmons, Matthew J. Clarkson, Stephen A. Thompson, Taimur T. Shah, Hashim Uddin Ahmed, Shonit Punwani, David J. Hawkes, Mark Emberton, Caroline M. Moore, Dean C. Barratt
2017	—	`conf`	Freehand Ultrasound Image Simulation with Spatially-Conditioned Generative Adversarial Networks. CMMI/RAMBO/SWITCH@MICCAI Yipeng Hu, Eli Gibson, Li-Lin Lee, Weidi Xie, Dean C. Barratt, Tom Vercauteren, J. Alison Noble
2017	J	`jnl`	Freehand Ultrasound Image Simulation with Spatially-Conditioned Generative Adversarial Networks. CoRR Yipeng Hu, Eli Gibson, Li-Lin Lee, Weidi Xie, Dean C. Barratt, Tom Vercauteren, J. Alison Noble
2017	—	`conf`	Intraoperative Organ Motion Models with an Ensemble of Conditional Generative Adversarial Networks. MICCAI (2) Yipeng Hu, Eli Gibson, Tom Vercauteren, Hashim Uddin Ahmed, Mark Emberton, Caroline M. Moore, J. Alison Noble, Dean C. Barratt
2017	J	`jnl`	Intraoperative Organ Motion Models with an Ensemble of Conditional Generative Adversarial Networks. CoRR Yipeng Hu, Eli Gibson, Tom Vercauteren, Hashim Uddin Ahmed, Mark Emberton, Caroline M. Moore, J. Alison Noble, Dean C. Barratt
2017	J	`jnl`	Label-driven weakly-supervised learning for multimodal deformable image registration. CoRR Yipeng Hu, Marc Modat, Eli Gibson, Nooshin Ghavami, Ester Bonmati, Caroline M. Moore, Mark Emberton, J. Alison Noble, Dean C. Barratt, Tom Vercauteren
2017	J	`jnl`	NiftyNet: a deep-learning platform for medical imaging. CoRR Eli Gibson, Wenqi Li, Carole H. Sudre, Lucas Fidon, Dzhoshkun I. Shakir, Guotai Wang, Zach Eaton-Rosen, Robert J. Gray, Tom Doel, Yipeng Hu, Tom Whyntie, Parashkev Nachev, Dean C. Barratt, Sébastien Ourselin, M. Jorge Cardoso, Tom Vercauteren
2017	—	`conf`	Towards Image-Guided Pancreas and Biliary Endoscopy: Automatic Multi-organ Segmentation on Abdominal CT with Dense Dilated Networks. MICCAI (1) Eli Gibson, Francesco Giganti, Yipeng Hu, Ester Bonmati, Steve Bandula, Kurinchi Gurusamy, Brian R. Davidson, Stephen P. Pereira, Matthew J. Clarkson, Dean C. Barratt
2016	—	`conf`	2D-3D Registration Accuracy Estimation for Optimised Planning of Image-Guided Pancreatobiliary Interventions. MICCAI (1) Yipeng Hu, Ester Bonmati, Eli Gibson, John H. Hipwell, David J. Hawkes, Steven Bandula, Stephen P. Pereira, Dean C. Barratt
2016	—	`conf`	Assessment of Electromagnetic Tracking Accuracy for Endoscopic Ultrasound. CARE@MICCAI Ester Bonmati, Yipeng Hu, Kurinchi Gurusamy, Brian R. Davidson, Stephen P. Pereira, Matthew J. Clarkson, Dean C. Barratt
2016	—	`conf`	Impact of region contouring variability on image-based focal therapy evaluation. Image-Guided Procedures Eli Gibson, Ian A. Donaldson, Taimur T. Shah, Yipeng Hu, Hashim Uddin Ahmed, Dean C. Barratt
2015	J	`jnl`	Detection and modelling of contacts in explicit finite-element simulation of soft tissue biomechanics. Int. J. Comput. Assist. Radiol. Surg. Stian Flage Johnsen, Zeike A. Taylor, Lianghao Han, Yipeng Hu, Matthew J. Clarkson, David J. Hawkes, Sébastien Ourselin
2015	J	`jnl`	NiftySim: A GPU-based nonlinear finite element package for simulation of soft tissue biomechanics. Int. J. Comput. Assist. Radiol. Surg. Stian Flage Johnsen, Zeike A. Taylor, Matthew J. Clarkson, John H. Hipwell, Marc Modat, Björn Eiben, Lianghao Han, Yipeng Hu, Thomy Mertzanidou, David J. Hawkes, Sébastien Ourselin
2015	J	`jnl`	Population-based prediction of subject-specific prostate deformation for MR-to-ultrasound image registration. Medical Image Anal. Yipeng Hu, Eli Gibson, Hashim Uddin Ahmed, Caroline M. Moore, Mark Emberton, Dean C. Barratt
2014	B	`conf`	Hybrid Decision Forests for Prostate Segmentation in Multi-channel MR Images. ICPR Qinquan Gao, Akshay Asthana, Tong Tong, Yipeng Hu, Daniel Rueckert, Philip J. Edwards
2013	—	`conf`	Registration of Prone and Supine CT Colonography Datasets with Differing Endoluminal Distension. Abdominal Imaging Holger Roth, Jamie McClelland, Thomas Hampshire, Darren Boone, Yipeng Hu, Marc Modat, Hui Zhang, Sébastien Ourselin, Steve Halligan, David J. Hawkes
2013	—	`conf`	Surface-based prostate registration with biomechanical regularization. Image-Guided Procedures Wendy J. M. van de Ven, Yipeng Hu, Jelle O. Barentsz, Nico Karssemeijer, Dean C. Barratt, Henkjan J. Huisman
2012	J	`jnl`	MR to ultrasound registration for image-guided prostate interventions. Medical Image Anal. Yipeng Hu, Hashim Uddin Ahmed, Zeike A. Taylor, Clare Allen, Mark Emberton, David J. Hawkes, Dean C. Barratt
2011	J	`jnl`	Modelling Prostate Motion for Data Fusion During Image-Guided Interventions. IEEE Trans. Medical Imaging Yipeng Hu, Timothy J. Carter, Hashim Uddin Ahmed, Mark Emberton, Clare Allen, David J. Hawkes, Dean C. Barratt
2010	—	`conf`	Deformable Vessel-Based Registration Using Landmark-Guided Coherent Point Drift. MIAR Yipeng Hu, Erik-Jan Rijkhorst, Richard Manber, David J. Hawkes, Dean C. Barratt
2009	—	`conf`	MR to Ultrasound Image Registration for Guiding Prostate Biopsy and Interventions. MICCAI (1) Yipeng Hu, Hashim Uddin Ahmed, Clare Allen, Doug Pendsé, Mahua Sahu, Mark Emberton, David J. Hawkes, Dean C. Barratt
2008	—	`conf`	A Statistical Motion Model Based on Biomechanical Simulations for Data Fusion during Image-Guided Prostate Interventions. MICCAI (1) Yipeng Hu, Dominic Morgan, Hashim Uddin Ahmed, Doug Pendsé, Mahua Sahu, Clare Allen, Mark Emberton, David J. Hawkes, Dean C. Barratt
2008	—	`conf`	Modelling Prostate Gland Motion for Image-Guided Interventions. ISBMS Yipeng Hu, Dominic Morgan, Hashim Uddin Ahmed, Doug Pendsé, Mahua Sahu, Clare Allen, Mark Emberton, David J. Hawkes, Dean C. Barratt