Yimin Fan

17 papers A* 2B 2Journal 11Unranked 2
YearRankTypeTitle / Venue / Authors
2026 A* conf
DS-ProGen: A Dual-Structure Deep Language Model for Functional Protein Design.
AAAI
Yanting Li, Zikang Wang, Jiyue Jiang, Ziqian Lin, Dongchen He, Yuheng Shan, Yanruisheng Shao, Jiayi Li, Xiangyu Shi, Jiuming Wang, Yanyu Chen, Yimin Fan, Han Li, Yu Li
2026 J jnl
Predicting drug responses of unseen cell types through transfer learning with foundation models.
Nat. Comput. Sci.
Yixuan Wang, Xinyuan Liu, Yimin Fan, Binghui Xie, James Cheng, Kam Chung Wong, Pak Hang Peter Cheung, Irwin King, Yu Li
2025 J jnl
Benchmarking Large Language Models on Multiple Tasks in Bioinformatics NLP with Prompting.
CoRR
Jiyue Jiang, Pengan Chen, Jiuming Wang, Dongchen He, Ziqin Wei, Liang Hong, Licheng Zong, Sheng Wang, Qinze Yu, Zixian Ma, Yanyu Chen, Yimin Fan, Xiangyu Shi, Jiawei Sun, Chuan Wu, Yu Li
2025 J jnl
DS-ProGen: A Dual-Structure Deep Language Model for Functional Protein Design.
CoRR
Yanting Li, Jiyue Jiang, Zikang Wang, Ziqian Lin, Dongchen He, Yuheng Shan, Yanruisheng Shao, Jiayi Li, Xiangyu Shi, Jiuming Wang, Yanyu Chen, Yimin Fan, Han Li, Yu Li
2025 J jnl
Fusion CNN-Transformer Model for Target Counting in Complex Scenarios.
Informatica (Slovenia)
Xingyuan He, Ruiying Wang, Ting Cao, Weiyu Liang, Yimin Fan
2025 B conf
cfDecon: Accurate and Interpretable Methylation-Based Cell Type Deconvolution for Cell-Free DNA.
RECOMB
Yixuan Wang, Jiayi Li, Jingqi Li, Shen Yang, Yuhan Huang, Xinyuan Liu, Yimin Fan, Irwin King, Yumei Li, Yu Li
2024 B conf
GFETM: Genome Foundation-Based Embedded Topic Model for scATAC-seq Modeling.
RECOMB
Yimin Fan, Yu Li, Jun Ding, Yue Li
2024 J jnl
Learning meaningful representation of single-neuron morphology via large-scale pre-training.
Bioinform.
Yimin Fan, Yaxuan Li, Yunhua Zhong, Liang Hong, Lei Li, Yu Li
2024 J jnl
Progress and Opportunities of Foundation Models in Bioinformatics.
CoRR
Qing Li, Zhihang Hu, Yixuan Wang, Lei Li, Yimin Fan, Irwin King, Le Song, Yu Li
2024 J jnl
Progress and opportunities of foundation models in bioinformatics.
Briefings Bioinform.
Qing Li, Zhihang Hu, Yixuan Wang, Lei Li, Yimin Fan, Irwin King, Gengjie Jia, Sheng Wang, Le Song, Yu Li
2023 A* conf
Evaluating Neuron Interpretation Methods of NLP Models.
NeurIPS
Yimin Fan, Fahim Dalvi, Nadir Durrani, Hassan Sajjad
2023 J jnl
Evaluating Neuron Interpretation Methods of NLP Models.
CoRR
Yimin Fan, Fahim Dalvi, Nadir Durrani, Hassan Sajjad
2021 — conf
Discovering Representation Sprachbund For Multilingual Pre-Training.
EMNLP (Findings)
Yimin Fan, Yaobo Liang, Alexandre Muzio, Hany Hassan, Houqiang Li, Ming Zhou, Nan Duan
2021 J jnl
Discovering Representation Sprachbund For Multilingual Pre-Training.
CoRR
Yimin Fan, Yaobo Liang, Alexandre Muzio, Hany Hassan, Houqiang Li, Ming Zhou, Nan Duan
2020 — conf
Enhance The Performance Of Navigation: A Two-Stage Machine Learning Approach.
BigCom
Yimin Fan, Zhiyuan Wang, Yuanpeng Lin, Haisheng Tan
2020 J jnl
Enhance the performance of navigation: A two-stage machine learning approach.
CoRR
Yimin Fan, Zhiyuan Wang, Yuanpeng Lin, Haisheng Tan
2020 J jnl
Iterative learning formation control for continuous-time multi-agent systems with randomly varying trial lengths.
J. Frankl. Inst.
Yang Liu, Yimin Fan, Yingmin Jia