Yiheng Zhu - RankMe

16 papers A* 5Journal 10Unranked 1

Year	Rank	Type	Title / Venue / Authors
2025	J	`jnl`	ProtFlow: Fast Protein Sequence Design via Flow Matching on Compressed Protein Language Model Embeddings. CoRR Zitai Kong, Yiheng Zhu, Yinlong Xu, Hanjing Zhou, Mingzhe Yin, Jialu Wu, Hongxia Xu, Chang-Yu Hsieh, Tingjun Hou, Jian Wu
2025	—	`conf`	Structure-Enhanced Protein Instruction Tuning: Towards General-Purpose Protein Understanding with LLMs. KDD (2) Wei Wu, Chao Wang, Liyi Chen, Mingze Yin, Yiheng Zhu, Kun Fu, Jieping Ye, Hui Xiong, Zheng Wang
2025	A*	`conf`	Synergy of GFlowNet and Protein Language Model Makes a Diverse Antibody Designer. AAAI Mingze Yin, Hanjing Zhou, Yiheng Zhu, Jialu Wu, Wei Wu, Mingyang Li, Kun Fu, Zheng Wang, Chang-Yu Hsieh, Tingjun Hou, Jian Wu
2024	J	`jnl`	Generative AI for Controllable Protein Sequence Design: A Survey. CoRR Yiheng Zhu, Zitai Kong, Jialu Wu, Weize Liu, Yuqiang Han, Mingze Yin, Hongxia Xu, Chang-Yu Hsieh, Tingjun Hou
2024	A*	`conf`	Making Pre-trained Language Models Great on Tabular Prediction. ICLR Jiahuan Yan, Bo Zheng, Hongxia Xu, Yiheng Zhu, Danny Z. Chen, Jimeng Sun, Jian Wu, Jintai Chen
2024	J	`jnl`	Making Pre-trained Language Models Great on Tabular Prediction. CoRR Jiahuan Yan, Bo Zheng, Hongxia Xu, Yiheng Zhu, Danny Z. Chen, Jimeng Sun, Jian Wu, Jintai Chen
2024	J	`jnl`	Multi-Modal CLIP-Informed Protein Editing. CoRR Mingze Yin, Hanjing Zhou, Yiheng Zhu, Miao Lin, Yixuan Wu, Jialu Wu, Hongxia Xu, Chang-Yu Hsieh, Tingjun Hou, Jintai Chen, Jian Wu
2024	J	`jnl`	S CoRR Mingze Yin, Hanjing Zhou, Jialu Wu, Yiheng Zhu, Yuxuan Zhan, Zitai Kong, Hongxia Xu, Chang-Yu Hsieh, Jintai Chen, Tingjun Hou, Jian Wu
2024	J	`jnl`	Structure-Enhanced Protein Instruction Tuning: Towards General-Purpose Protein Understanding. CoRR Wei Wu, Chao Wang, Liyi Chen, Mingze Yin, Yiheng Zhu, Kun Fu, Jieping Ye, Hui Xiong, Zheng Wang
2023	A*	`conf`	GCL: Gradient-Guided Contrastive Learning for Medical Image Segmentation with Multi-Perspective Meta Labels. ACM Multimedia Yixuan Wu, Jintai Chen, Jiahuan Yan, Yiheng Zhu, Danny Z. Chen, Jian Wu
2023	J	`jnl`	GCL: Gradient-Guided Contrastive Learning for Medical Image Segmentation with Multi-Perspective Meta Labels. CoRR Yixuan Wu, Jintai Chen, Jiahuan Yan, Yiheng Zhu, Danny Z. Chen, Jian Wu
2023	A*	`conf`	MolHF: A Hierarchical Normalizing Flow for Molecular Graph Generation. IJCAI Yiheng Zhu, Zhenqiu Ouyang, Ben Liao, Jialu Wu, Yixuan Wu, Chang-Yu Hsieh, Tingjun Hou, Jian Wu
2023	J	`jnl`	MolHF: A Hierarchical Normalizing Flow for Molecular Graph Generation. CoRR Yiheng Zhu, Zhenqiu Ouyang, Ben Liao, Jialu Wu, Yixuan Wu, Chang-Yu Hsieh, Tingjun Hou, Jian Wu
2023	A*	`conf`	Sample-efficient Multi-objective Molecular Optimization with GFlowNets. NeurIPS Yiheng Zhu, Jialu Wu, Chaowen Hu, Jiahuan Yan, Chang-Yu Hsieh, Tingjun Hou, Jian Wu
2023	J	`jnl`	Sample-efficient Multi-objective Molecular Optimization with GFlowNets. CoRR Yiheng Zhu, Jialu Wu, Chaowen Hu, Jiahuan Yan, Chang-Yu Hsieh, Tingjun Hou, Jian Wu
2022	J	`jnl`	TGSA: protein-protein association-based twin graph neural networks for drug response prediction with similarity augmentation. Bioinform. Yiheng Zhu, Zhenqiu Ouyang, Wenbo Chen, Ruiwei Feng, Danny Z. Chen, Ji Cao, Jian Wu