Yiannis N. Kaznessis

18 papers Journal 17Unranked 1
YearRankTypeTitle / Venue / Authors
2018 J jnl
A linearization method for probability moment equations.
Comput. Chem. Eng.
Michail Vlysidis, Yiannis N. Kaznessis
2018 J jnl
On Differences between Deterministic and Stochastic Models of Chemical Reactions: Schlögl Solved with ZI-Closure.
Entropy
Michail Vlysidis, Yiannis N. Kaznessis
2018 J jnl
Solving Stochastic Reaction Networks with Maximum Entropy Lagrange Multipliers.
Entropy
Michail Vlysidis, Yiannis N. Kaznessis
2012 J jnl
Stochastic simulations of a synthetic bacteria-yeast ecosystem.
BMC Syst. Biol.
Konstantinos Biliouris, David Babson, Claudia Schmidt-Dannert, Yiannis N. Kaznessis
2011 J jnl
Model reduction of multi-scale chemical Langevin equations.
Syst. Control. Lett.
Marie-Nathalie Contou-Carrere, Vassilios Sotiropoulos, Yiannis N. Kaznessis, Prodromos Daoutidis
2011 J jnl
Stochastic simulations of the tetracycline operon.
BMC Syst. Biol.
Konstantinos Biliouris, Prodromos Daoutidis, Yiannis N. Kaznessis
2010 J jnl
SynBioSS designer: a web-based tool for the automated generation of kinetic models for synthetic biological constructs.
Briefings Bioinform.
Emma M. B. Weeding, Jason Houle, Yiannis N. Kaznessis
2009 J jnl
Model Reduction of Multiscale Chemical Langevin Equations: A Numerical Case Study.
IEEE ACM Trans. Comput. Biol. Bioinform.
Vassilios Sotiropoulos, Marie-Nathalie Contou-Carrere, Prodromos Daoutidis, Yiannis N. Kaznessis
2009 J jnl
Poisson-Nernst-Planck Models of Nonequilibrium Ion Electrodiffusion through a Protegrin Transmembrane Pore.
PLoS Comput. Biol.
Dan S. Bolintineanu, Abdallah Sayyed-Ahmad, H. Ted Davis, Yiannis N. Kaznessis
2008 — conf
Multiscale Models for Synthetic Biology.
BIOCOMP
Yiannis N. Kaznessis, Vassilios Sotiropoulos, Anthony D. Hill, Jonathan R. Tomshine, Katherine Volzing, John Barrett, Emma M. B. Weeding
2008 J jnl
SynBioSS: the synthetic biology modeling suite.
Bioinform.
Anthony D. Hill, Jonathan R. Tomshine, Emma M. B. Weeding, Vassilios Sotiropoulos, Yiannis N. Kaznessis
2007 J jnl
Models for synthetic biology.
BMC Syst. Biol.
Yiannis N. Kaznessis
2007 J jnl
Synthetic tetracycline-inducible regulatory networks: computer-aided design of dynamic phenotypes.
BMC Syst. Biol.
Vassilios Sotiropoulos, Yiannis N. Kaznessis
2006 J jnl
Multiscale Hy3S: Hybrid stochastic simulation for supercomputers.
BMC Bioinform.
Howard M. Salis, Vassilios Sotiropoulos, Yiannis N. Kaznessis
2006 J jnl
Residue Conservation Information for Generating near-native Structures in Protein-protein Docking.
J. Bioinform. Comput. Biol.
Yuhua Duan, Boojala V. B. Reddy, Yiannis N. Kaznessis
2005 J jnl
A Quantitative Analysis of Interfacial Amino Acid Conservation in Protein-protein Hetero Complexes.
J. Bioinform. Comput. Biol.
Boojala V. B. Reddy, Yiannis N. Kaznessis
2005 J jnl
Numerical simulation of stochastic gene circuits.
Comput. Chem. Eng.
Howard M. Salis, Yiannis N. Kaznessis
2001 J jnl
Prediction of blood-brain partitioning using Monte Carlo simulations of molecules in water.
J. Comput. Aided Mol. Des.
Yiannis N. Kaznessis, Mark E. Snow, C. John Blankley