Yi Guo - RankMe

72 papers C 1Misc 14Journal 38Unranked 19

Year	Rank	Type	Title / Venue / Authors
2026	J	`jnl`	A topic modeling analysis of stigma dimensions, social, and related behavioral circumstances in clinical notes among patients with HIV. Int. J. Medical Informatics Ziyi Chen, Yiyang Liu, Mattia Prosperi, Krishna Vaddiparti, Robert L. Cook, Jiang Bian, Yi Guo, Yonghui Wu
2026	J	`jnl`	Multi-site analysis of COVID-19 and new-onset diabetes reveals need for improved sensitivity of EHR-based COVID-19 phenotypes - a DiCAYA Network analysis. J. Am. Medical Informatics Assoc. Lorna E. Thorpe, Jasmin Divers, Annemarie Hirsch, Brian S. Schwartz, Bo Cai, Jihad S. Obeid, Angela Liese, Tessa Crume, Anna Bellatorre, Jiang Bian, Yi Guo, Sarah Bost, Tianchen Lyu, Matthew T. Mefford, Matt Zhou, Eva Lustigova, Levon H. Utidjian, Mitchell Maltenfort, Patrick Hanley, Meda E. Pavkov, Marc B. Rosenman, Andrea R. Titus, Charles Bailey, Christopher B. Forrest, Levon Utidjian, Mitch Maltenfort, Amy Shah, Eneida A. Mendonça, G. Todd Alonso, Sara J. Deakyne Davies, H. Timothy Bunnell, Anne Kazak, Melody Kitzmiller, Manmohan Kamboj, Dimitri A. Christakis, Daksha Ranade, Annemarie G. Hirsch, Joseph J. Dewalle, H. Lester Kirchner, Meredith Lewis, Dione G. Mercer, Cara M. Nordberg, Amy Poissant, Brian E. Dixon, Shaun J. Grannis, Katie S. Allen, Anna Roberts, Nimish Valvi, Jeff Warvel, Ashley Wiensch, Tamara S. Hannon, Kristi Reynolds, John Chang, Don McCarthy, Rong Wei, Hui Zhou, Marc Rosenman, Lu Zhang, George Lales, Anthony Wong, Allison Zelinski, Yuan Luo, Mark Weiner, Pedro Rivera, Thomas Carton, Elizabeth Nauman, Harold P. Lehmann, Meredith Akerman, Rebecca Anthopolos, Stefanie Bendik, Sarah Conderino, Andrew Fair, Jessica Guillaume, Shahidul Islam, Alan Jacobson, David C. Lee, Chinyere Okpara, Anand Rajan, Andrea Titus, Dana Dabelea, Theresa Anderson, Rebecca Conway, Toan Ong, Jack Pattee, Shawna Burgett, Hui Shao, Elizabeth A. Shenkman, Sarah J. Bost, William T. Donahoo, William R. Hogan, Piaopiao Li, Mattia Prosperi, Yonghui Wu, Angela D. Liese, Lisa Knight, Caroline Rudisill, Jessica Stucker, Deborah Bowlby, Elaine Apperson, Alex Ewing, Giuseppina Imperatore, Deborah Rolka, Hui Xie, Ibrahim Zaganjor
2025	J	`jnl`	A Topic Modeling Analysis of Stigma Dimensions, Social, and Related Behavioral Circumstances in Clinical Notes Among Patients with HIV. CoRR Ziyi Chen, Yiyang Liu, Mattia Prosperi, Krishna Vaddiparti, Robert L. Cook, Jiang Bian, Yi Guo, Yonghui Wu
2025	—	`conf`	Algorithmic Fairness in Machine Learning Prediction of Autism Using Electronic Health Records. MedInfo Amber M. Angell, Yongqiu Li, Jiang Bian, Camille Parchment, Larry Yin, Srikar Chamala, Hesamedin Hakimjavadi, Lindsay Thompson, Yi Guo
2025	J	`jnl`	GatorCLR: Personalized predictions of patient outcomes on electronic health records using self-supervised contrastive graph representation. J. Biomed. Informatics Yuxi Liu, Zhenhao Zhang, Jiacong Mi, Shirui Pan, Tianlong Chen, Yi Guo, Xing He, Jiang Bian
2025	—	`conf`	Machine Learning Prediction of Autism Spectrum Disorder Diagnosis Through Linking Mothers' and Children's Electronic Health Records. ICHI Yongqiu Li, Yu Huang, Shuang Yang, Elahe M. Shychuk, Elizabeth A. Shenkman, Jiang Bian, Amber M. Angell, Yi Guo
2024	J	`jnl`	Exploring the Relation between Contextual Social Determinants of Health and COVID-19 Occurrence and Hospitalization. Informatics Aokun Chen, Yunpeng Zhao, Yi Zheng, Hui Hu, Xia Hu, Jennifer N. Fishe, William R. Hogan, Elizabeth A. Shenkman, Yi Guo, Jiang Bian
2024	J	`jnl`	Extracting Pulmonary Nodules and Nodule Characteristics from Radiology Reports of Lung Cancer Screening Patients Using Transformer Models. J. Heal. Informatics Res. Shuang Yang, Xi Yang, Tianchen Lyu, James L. Huang, Aokun Chen, Xing He, Dejana Braithwaite, Hiren J. Mehta, Yonghui Wu, Yi Guo, Jiang Bian
2024	J	`jnl`	Feasibility of Identifying Factors Related to Alzheimer's Disease and Related Dementia in Real-World Data. CoRR Aokun Chen, Qian Li, Yu Huang, Yongqiu Li, Yu-Neng Chuang, Xia Hu, Serena Guo, Yonghui Wu, Yi Guo, Jiang Bian
2024	J	`jnl`	Identifying social determinants of health from clinical narratives: A study of performance, documentation ratio, and potential bias. J. Biomed. Informatics Zehao Yu, Cheng Peng, Xi Yang, Chong Dang, Prakash Adekkanattu, Braja Gopal Patra, Yifan Peng, Jyotishman Pathak, Debbie L. Wilson, Ching-Yuan Chang, Wei-Hsuan Lo-Ciganic, Thomas J. George, William R. Hogan, Yi Guo, Jiang Bian, Yonghui Wu
2024	—	`conf`	Message from the General Chairs; ICHI 2024. ICHI Zhe He, Yi Guo, Jiang Bian
2024	J	`jnl`	Narrative Feature or Structured Feature? A Study of Large Language Models to Identify Cancer Patients at Risk of Heart Failure. CoRR Ziyi Chen, Mengyuan Zhang, Mustafa Mohammed Ahmed, Yi Guo, Thomas J. George, Jiang Bian, Yonghui Wu
2023	J	`jnl`	A Study of Generative Large Language Model for Medical Research and Healthcare. CoRR Cheng Peng, Xi Yang, Aokun Chen, Kaleb E. Smith, Nima M. Pournejatian, Anthony B. Costa, Cheryl Martin, Mona G. Flores, Ying Zhang, Tanja Magoc, Gloria P. Lipori, Duane A. Mitchell, Naykky Singh Ospina, Mustafa M. Ahmed, William R. Hogan, Elizabeth Shenkman, Yi Guo, Jiang Bian, Yonghui Wu
2023	J	`jnl`	A study of generative large language model for medical research and healthcare. npj Digit. Medicine Cheng Peng, Xi Yang, Aokun Chen, Kaleb E. Smith, Nima M. Pournejatian, Anthony B. Costa, Cheryl Martin, Mona G. Flores, Ying Zhang, Tanja Magoc, Gloria P. Lipori, Duane A. Mitchell, Naykky Singh Ospina, Mustafa M. Ahmed, William R. Hogan, Elizabeth A. Shenkman, Yi Guo, Jiang Bian, Yonghui Wu
2023	J	`jnl`	Assess the documentation of cognitive tests and biomarkers in electronic health records via natural language processing for Alzheimer's disease and related dementias. Int. J. Medical Informatics Zhaoyi Chen, Hansi Zhang, Xi Yang, Songzi Wu, Xing He, Jie Xu, Jingchuan Guo, Mattia Prosperi, Fei Wang, Hua Xu, Yong Chen, Hui Hu, Steven DeKosky, Matthew Farrer, Yi Guo, Yonghui Wu, Jiang Bian
2023	J	`jnl`	Contextualized Medication Information Extraction Using Transformer-based Deep Learning Architectures. CoRR Aokun Chen, Zehao Yu, Xi Yang, Yi Guo, Jiang Bian, Yonghui Wu
2023	J	`jnl`	Contextualized medication information extraction using Transformer-based deep learning architectures. J. Biomed. Informatics Aokun Chen, Zehao Yu, Xi Yang, Yi Guo, Jiang Bian, Yonghui Wu
2023	—	`conf`	Exploring the Effect of Eligibility Criteria on AD Severity and Severe Adverse Event in Eligible Patients. ICHI Aokun Chen, Qian Li, Elizabeth Shenkman, Yonghui Wu, Yi Guo, Jiang Bian
2023	J	`jnl`	Predicting the Risk of Alzheimer's Disease and Related Dementia in Patients with Mild Cognitive Impairment Using a Semi-Competing Risk Approach. Informatics Zhaoyi Chen, Yuchen Yang, Dazheng Zhang, Jingchuan Guo, Yi Guo, Xia Hu, Yong Chen, Jiang Bian
2023	—	`conf`	Real-World Effectiveness of Lung Cancer Screening Using Deep Learning-Based Counterfactual Prediction. MedInfo Zheng Feng, Zhaoyi Chen, Yi Guo, Mattia Prosperi, Hiren J. Mehta, Dejana Braithwaite, Yonghui Wu, Jiang Bian
2023	J	`jnl`	The role of health system penetration rate in estimating the prevalence of type 1 diabetes in children and adolescents using electronic health records. J. Am. Medical Informatics Assoc. Piaopiao Li, Tianchen Lyu, Khalid Alkhuzam, Eliot Spector, William T. Donahoo, Sarah Bost, Yonghui Wu, William R. Hogan, Mattia Prosperi, Desmond A. Schatz, Mark A. Atkinson, Michael J. Haller, Elizabeth A. Shenkman, Yi Guo, Jiang Bian, Hui Shao
2022	—	`conf`	A Preliminary Study of Extracting Pulmonary Nodules and Nodule Characteristics from Radiology Reports Using Natural Language Processing. ICHI Shuang Yang, Xi Yang, Tianchen Lyu, Xing He, Dejana Braithwaite, Hiren J. Mehta, Yi Guo, Yonghui Wu, Jiang Bian
2022	J	`jnl`	A scoping review of semantic integration of health data and information. Int. J. Medical Informatics Hansi Zhang, Tianchen Lyu, Pengfei Yin, Sarah Bost, Xing He, Yi Guo, Mattia Prosperi, William R. Hogan, Jiang Bian
2022	J	`jnl`	Biases in using social media data for public health surveillance: A scoping review. Int. J. Medical Informatics Yunpeng Zhao, Xing He, Zheng Feng, Sarah Bost, Mattia Prosperi, Yonghui Wu, Yi Guo, Jiang Bian
2022	Misc	`conf`	Impacts of Eligibility Criteria on Trial Participants' Age in Alzheimer's Disease Clinical Trials. AMIA Aokun Chen, Qian Li, Xing He, Michael Jaffee, William R. Hogan, Fei Wang, Yi Guo, Jiang Bian
2022	J	`jnl`	SODA: A Natural Language Processing Package to Extract Social Determinants of Health for Cancer Studies. CoRR Zehao Yu, Xi Yang, Chong Dang, Prakash Adekkanattu, Braja Gopal Patra, Yifan Peng, Jyotishman Pathak, Debbie L. Wilson, Ching-Yuan Chang, Wei-Hsuan Lo-Ciganic, Thomas J. George, William R. Hogan, Yi Guo, Jiang Bian, Yonghui Wu
2021	Misc	`conf`	A Study of Social and Behavioral Determinants of Health in Lung Cancer Patients Using Transformers-based Natural Language Processing Models. AMIA Zehao Yu, Xi Yang, Chong Dang, Songzi Wu, Prakash Adekkanattu, Jyotishman Pathak, Thomas J. George, William R. Hogan, Yi Guo, Jiang Bian, Yonghui Wu
2021	J	`jnl`	A Study of Social and Behavioral Determinants of Health in Lung Cancer Patients Using Transformers-based Natural Language Processing Models. CoRR Zehao Yu, Xi Yang, Chong Dang, Songzi Wu, Prakash Adekkanattu, Jyotishman Pathak, Thomas J. George, William R. Hogan, Yi Guo, Jiang Bian, Yonghui Wu
2021	J	`jnl`	Bagged random causal networks for interventional queries on observational biomedical datasets. J. Biomed. Informatics Mattia Prosperi, Yi Guo, Jiang Bian
2021	J	`jnl`	Clinical Relation Extraction Using Transformer-based Models. CoRR Xi Yang, Zehao Yu, Yi Guo, Jiang Bian, Yonghui Wu
2021	Misc	`conf`	Data and Model Biases in Social Media Analyses: A Case Study of COVID-19 Tweets. AMIA Yunpeng Zhao, Pengfei Yin, Yongqiu Li, Xing He, Jingcheng Du, Cui Tao, Yi Guo, Mattia Prosperi, Pierangelo Veltri, Xi Yang, Yonghui Wu, Jiang Bian
2021	J	`jnl`	Deep propensity network using a sparse autoencoder for estimation of treatment effects. J. Am. Medical Informatics Assoc. Shantanu Ghosh, Jiang Bian, Yi Guo, Mattia Prosperi
2021	J	`jnl`	Exploring the feasibility of using real-world data from a large clinical data research network to simulate clinical trials of Alzheimer's disease. npj Digit. Medicine Zhaoyi Chen, Hansi Zhang, Yi Guo, Thomas J. George, Mattia Prosperi, William R. Hogan, Zhe He, Elizabeth A. Shenkman, Fei Wang, Jiang Bian
2021	J	`jnl`	The application of artificial intelligence and data integration in COVID-19 studies: a scoping review. J. Am. Medical Informatics Assoc. Yi Guo, Yahan Zhang, Tianchen Lyu, Mattia Prosperi, Fei Wang, Hua Xu, Jiang Bian
2021	—	`conf`	Transformer-based named entity recognition for parsing clinical trial eligibility criteria. BCB Shubo Tian, Arslan Erdengasileng, Xi Yang, Yi Guo, Yonghui Wu, Jinfeng Zhang, Jiang Bian, Zhe He
2021	Misc	`conf`	Validation of Real-World Data-based Endpoint Measures of Cancer Treatment Outcomes. AMIA Qian Li, Hansi Zhang, Zhaoyi Chen, Yi Guo, Thomas J. George, Yong Chen, Fei Wang, Jiang Bian
2020	—	`conf`	A Natural Language Processing Tool to Extract Quantitative Smoking Status from Clinical Narratives. ICHI Xi Yang, Hanyuan Yang, Tianchen Lyu, Shuang Yang, Yi Guo, Jiang Bian, Hua Xu, Yonghui Wu
2020	J	`jnl`	An ontology-based documentation of data discovery and integration process in cancer outcomes research. BMC Medical Informatics Decis. Mak. Hansi Zhang, Yi Guo, Mattia Prosperi, Jiang Bian
2020	J	`jnl`	Assessing mental health signals among sexual and gender minorities using Twitter data. Health Informatics J. Yunpeng Zhao, Yi Guo, Xing He, Yonghui Wu, Xi Yang, Mattia Prosperi, Yanghua Jin, Jiang Bian
2020	J	`jnl`	Assessing the effect of data integration on predictive ability of cancer survival models. Health Informatics J. Yi Guo, Jiang Bian, François Modave, Qian Li, Thomas J. George, Mattia Prosperi, Elizabeth Shenkman
2020	J	`jnl`	Assessing the practice of data quality evaluation in a national clinical data research network through a systematic scoping review in the era of real-world data. J. Am. Medical Informatics Assoc. Jiang Bian, Tianchen Lyu, Alexander T. Loiacono, Tonatiuh Mendoza Viramontes, Gloria P. Lipori, Yi Guo, Yonghui Wu, Mattia Prosperi, Thomas J. George, Christopher A. Harle, Elizabeth A. Shenkman, William R. Hogan
2020	J	`jnl`	Causal inference and counterfactual prediction in machine learning for actionable healthcare. Nat. Mach. Intell. Mattia Prosperi, Yi Guo, Matthew Sperrin, James S. Koopman, Jae S. Min, Xing He, Shannan N. Rich, Mo Wang, Iain E. Buchan, Jiang Bian
2020	Misc	`conf`	Developing and Validating a Computable Phenotype for the Identification of Transgender and Gender Nonconforming Individuals and Subgroups. AMIA Yi Guo, Xing He, Tianchen Lyu, Hansi Zhang, Yonghui Wu, Xi Yang, Zhaoyi Chen, Merry J. Markham, François Modave, Mengjun Xie, William R. Hogan, Christopher A. Harle, Elizabeth Shenkman, Jiang Bian
2020	C	`conf`	Integrating Crowdsourcing and Active Learning for Classification of Work-Life Events from Tweets. IEA/AIE Yunpeng Zhao, Mattia Prosperi, Tianchen Lyu, Yi Guo, Le Zhou, Jiang Bian
2020	J	`jnl`	Integrating Crowdsourcing and Active Learning for Classification of Work-Life Events from Tweets. CoRR Yunpeng Zhao, Mattia Prosperi, Tianchen Lyu, Yi Guo, Jiang Bian
2020	J	`jnl`	Mining Twitter to assess the determinants of health behavior toward human papillomavirus vaccination in the United States. J. Am. Medical Informatics Assoc. Hansi Zhang, Christopher Wheldon, Adam G. Dunn, Cui Tao, Jinhai Huo, Rui Zhang, Mattia Prosperi, Yi Guo, Jiang Bian
2020	Misc	`conf`	Using Real-World Data to Rationalize Clinical Trials Eligibility Criteria: a case study on Alzheimer's Disease and Donepezil. AMIA Qian Li, Yi Guo, Zhe He, Hansi Zhang, Thomas J. George, Jiang Bian
2019	J	`jnl`	ALOHA: developing an interactive graph-based visualization for dietary supplement knowledge graph through user-centered design. BMC Medical Informatics Decis. Mak. Xing He, Rui Zhang, Rubina F. Rizvi, Jake Vasilakes, Xi Yang, Yi Guo, Zhe He, Mattia Prosperi, Jinhai Huo, Jordan Alpert, Jiang Bian
2019	Misc	`conf`	Assessing the Validity of a a priori Patient-Trial Generalizability Score using Real-world Data from a Large Clinical Data Research Network: A Colorectal Cancer Clinical Trial Case Study. AMIA Qian Li, Zhe He, Yi Guo, Hansi Zhang, Thomas J. George, William R. Hogan, Neil Charness, Jiang Bian
2019	—	`conf`	Exploring Lung Cancer Screening Discussions on Twitter. MedInfo Yunpeng Zhao, Jinhai Huo, Mattia Prosperi, Yi Guo, Yongqiu Li, Jiang Bian
2019	J	`jnl`	Mining Twitter to Assess the Determinants of Health Behavior towards Human Papillomavirus Vaccination in the United States. CoRR Hansi Zhang, Christopher Wheldon, Adam G. Dunn, Cui Tao, Jinhai Huo, Rui Zhang, Mattia Prosperi, Yi Guo, Jiang Bian
2019	—	`conf`	Ontology for Documentation of Variable and Data Source Selection Process to Support Integrative Data Analysis in Cancer Outcomes Research. SEPDA@ISWC Hansi Zhang, Yi Guo, Jiang Bian
2019	—	`conf`	STAT: A Web-based Semantic Text Annotation Tool to Assist Building Mental Health Knowledge Base. ICHI Xing He, Hansi Zhang, Xi Yang, Yi Guo, Jiang Bian
2019	—	`conf`	Understanding Perceptions and Attitudes in Breast Cancer Discussions on Twitter. MedInfo François Modave, Yunpeng Zhao, Janice L. Krieger, Zhe He, Yi Guo, Jinhai Huo, Mattia Prosperi, Jiang Bian
2019	J	`jnl`	Understanding Perceptions and Attitudes in Breast Cancer Discussions on Twitter. CoRR François Modave, Yunpeng Zhao, Janice L. Krieger, Zhe He, Yi Guo, Jinhai Huo, Mattia Prosperi, Jiang Bian
2018	J	`jnl`	An ontology-guided semantic data integration framework to support integrative data analysis of cancer survival. BMC Medical Informatics Decis. Mak. Hansi Zhang, Yi Guo, Qian Li, Thomas J. George, Elizabeth Shenkman, François Modave, Jiang Bian
2018	—	`conf`	Assessing Mental Health Signals Among Sexual and Gender Minorities using Twitter Data. ICHI Workshops Yunpeng Zhao, Yi Guo, Xing He, Jinhai Huo, Yonghui Wu, Xi Yang, Jiang Bian
2018	Misc	`conf`	Combine Factual Medical Knowledge and Distributed Word Representation to Improve Clinical Named Entity Recognition. AMIA Yonghui Wu, Xi Yang, Jiang Bian, Yi Guo, Hua Xu, William R. Hogan
2018	Misc	`conf`	Computable Eligibility Criteria through Ontology-driven Data Access: A Case Study of Hepatitis C Virus Trials. AMIA Hansi Zhang, Zhe He, Xing He, Yi Guo, David R. Nelson, François Modave, Yonghui Wu, William R. Hogan, Mattia Prosperi, Jiang Bian
2018	J	`jnl`	OC-2-KB: integrating crowdsourcing into an obesity and cancer knowledge base curation system. BMC Medical Informatics Decis. Mak. Juan Antonio Lossio-Ventura, William R. Hogan, François Modave, Yi Guo, Zhe He, Xi Yang, Hansi Zhang, Jiang Bian
2018	—	`conf`	Prototyping an Interactive Visualization of Dietary Supplement Knowledge Graph. BIBM Xing He, Rui Zhang, Rubina F. Rizvi, Jake Vasilakes, Xi Yang, Yi Guo, Zhe He, Mattia Prosperi, Jiang Bian
2017	Misc	`conf`	A Twitter Study of the Relationship between the Geographic Variations of HPV Vaccination Rates and Online Information in the United States. AMIA Hansi Zhang, Yunpeng Zhao, Christopher Wheldon, Xinsong Du, Terrell Brown, Yi Guo, Stephanie Staras, Jingcheng Du, Cui Tao, Jiang Bian
2017	Misc	`conf`	Building an Obesity and Cancer Semantic Web Knowledge Base. AMIA Juan Antonio Lossio-Ventura, William R. Hogan, François Modave, Amanda Hicks, Yi Guo, Zhe He, Mirela Vasconcelos, Jiang Bian
2017	Misc	`conf`	Comparing and Contrasting A Priori and A Posteriori Generalizability Assessment of Clinical Trials on Type 2 Diabetes Mellitus. AMIA Zhe He, Arturo Gonzalez-Izquierdo, Spiros C. Denaxas, Andrei Sura, Yi Guo, William R. Hogan, Elizabeth Shenkman, Jiang Bian
2017	—	`conf`	Data integration through ontology-based data access to support integrative data analysis: A case study of cancer survival. BIBM Hansi Zhang, Yi Guo, Qian Li, Thomas J. George, Elizabeth A. Shenkman, Jiang Bian
2017	—	`conf`	Explore Care Pathways of Colorectal Cancer Patients with Social Network Analysis. MedInfo Tianyao Huo, Thomas J. George Jr., Yi Guo, Zhe He, Mattia Prosperi, François Modave, Jiang Bian
2017	Misc	`conf`	Implementing a Hash-based Privacy-Preserving Entity Resolution Tool in the OneFlorida Clinical Data Research Network. AMIA Jiang Bian, Andrei Sura, Gloria P. Lipori, Yi Guo, François Modave, Zhe He, Elizabeth Shenkman, William R. Hogan
2017	—	`conf`	OC-2-KB: A software pipeline to build an evidence-based obesity and cancer knowledge base. BIBM Juan Antonio Lossio-Ventura, William R. Hogan, François Modave, Yi Guo, Zhe He, Amanda Hicks, Jiang Bian
2017	—	`conf`	Ontology of Cancer Related Social-Ecological Variables. ICBO Dharani K. Balasubramanian, Jamillah Z. Khan, Jiang Bian, Yi Guo, William R. Hogan, Amanda Hicks
2017	J	`jnl`	Towards a privacy preserving cohort discovery framework for clinical research networks. J. Biomed. Informatics Jiawei Yuan, Bradley A. Malin, François Modave, Yi Guo, William R. Hogan, Elizabeth Shenkman, Jiang Bian
2016	Misc	`conf`	Examining Healthcare Utilization Patterns of Elderly and Middle-Aged Adults in the United States. FLAIRS Cilia E. Zayas, Zhe He, Jiawei Yuan, Mildred Maldonado-Molina, William R. Hogan, François Modave, Yi Guo, Jiang Bian
2016	—	`conf`	Towards an obesity-cancer knowledge base: Biomedical entity identification and relation detection. BIBM Juan Antonio Lossio-Ventura, William R. Hogan, François Modave, Amanda Hicks, Josh Hanna, Yi Guo, Zhe He, Jiang Bian