Yi Gao

64 papers A* 1A 2B 9Misc 1Journal 35Unranked 16
YearRankTypeTitle / Venue / Authors
2026 J jnl
A multi-task learning network with boundary regression for automatic ultrasound image segmentation.
Biomed. Signal Process. Control.
Zengan Huang, Qinzhu Yang, Yi Gao
2025 — conf
STsim: An Efficient Diffusion-Based Model for Generating Spot Images from Gene Expression in Spatial Transcriptomics.
BIBM
Pengyu Sun, Thi An Le, Xinzhen Yu, Yi Gao, Ha-Nam Nguyen, Thi-Hau Nguyen, Trung-Nghia Vu, Tian Mou
2025 J jnl
Synthesizing Images With Annotations for Medical Image Segmentation Using Diffusion Probabilistic Model.
Int. J. Imaging Syst. Technol.
Zengan Huang, Qinzhu Yang, Mu Tian, Yi Gao
2025 A conf
WSiG: A Graph Neural Network for Whole Slide Image Classification.
ECAI
Guangjian Zeng, Siyuan Tao, Yi Gao, Tian Mou
2024 — conf
Combing 3D body surface and CT volumetric data for ankylosing spondylitis surgery outcome simulation.
ISBI
Weizhen He, Haoran Zhu, Jialing Feng, Qinzhu Yang, Yanzhe Wei, Zhengji Huang, Huiren Tao, Yi Gao
2024 J jnl
Enhanced Deformation Vector Field Generation With Diffusion Models and Mamba-Based Network for Registration Performance Enhancement.
Int. J. Imaging Syst. Technol.
Zengan Huang, Shan Gao, Xiaxia Yu, LiangJia Zhu, Yi Gao
2023 J jnl
A Comprehensive Landscape of Imaging Feature-Associated RNA Expression Profiles in Human Breast Tissue.
Sensors
Tian Mou, Jianwen Liang, Trung-Nghia Vu, Mu Tian, Yi Gao
2023 J jnl
A dynamic interactive learning framework for automated 3D medical image segmentation.
CoRR
Mu Tian, Xiaohui Chen, Yi Gao
2023 J jnl
AttenScribble: Attentive Similarity Learning for Scribble-Supervised Medical Image Segmentation.
CoRR
Mu Tian, Qinzhu Yang, Yi Gao
2023 J jnl
Expectation-maximization algorithm leads to domain adaptation for a perineural invasion and nerve extraction task in whole slide digital pathology images.
Medical Biol. Eng. Comput.
Xue Li, Jun Huang, Cuiting Wang, Xiaxia Yu, Tianhao Zhao, Chuan Huang, Yi Gao
2023 — conf
Synthesizing with Diffusion model for improving medical image segmentation performance.
BIBM
Zengan Huang, Qinzhu Yang, Mu Tian, Yi Gao
2022 J jnl
A VR-based volumetric medical image segmentation and visualization system with natural human interaction.
Virtual Real.
Yi Gao, Cheng Chang, Xiaxia Yu, Pengjin Pang, Nian Xiong, Chuan Huang
2022 J jnl
An efficient deep equilibrium model for medical image segmentation.
Comput. Biol. Medicine
Sai Zhang, LiangJia Zhu, Yi Gao
2022 — conf
Multi-scale Multi-task Distillation for Incremental 3D Medical Image Segmentation.
ECCV Workshops (3)
Mu Tian, Qinzhu Yang, Yi Gao
2022 J jnl
Open-source algorithm and software for computed tomography-based virtual pancreatoscopy and other applications.
Vis. Comput. Ind. Biomed. Art
Haofan Huang, Xiaxia Yu, Mu Tian, Weizhen He, Shawn Xiang Li, Zhengrong Liang, Yi Gao
2022 J jnl
Two fully automated data-driven 3D whole-breast segmentation strategies in MRI for MR-based breast density using image registration and U-Net with a focus on reproducibility.
Vis. Comput. Ind. Biomed. Art
Jia Ying, Renee Cattell, Tianyun Zhao, Lan Lei, Zhao Jiang, Shahid M. Hussain, Yi Gao, H.-H. Sherry Chow, Alison T. Stopeck, Patricia A. Thompson, Chuan Huang
2021 J jnl
An Open Source Platform for Computational Histopathology.
IEEE Access
Xiaxia Yu, Bingshuai Zhao, Haofan Huang, Mu Tian, Sai Zhang, Hongping Song, Zengshan Li, Kun Huang, Yi Gao
2021 J jnl
Cross-Dataset Multiple Organ Segmentation From CT Imagery Using FBP-Derived Domain Adaptation.
IEEE Access
Jun Huang, Xue Li, Jing Wang, Xiaxia Yu, LiangJia Zhu, Ying Zhan, Yi Gao, Chuan Huang
2021 J jnl
MCMC Guided CNN Training and Segmentation for Pancreas Extraction.
IEEE Access
Mu Tian, Jinchan He, Xiaxia Yu, Chudong Cai, Yi Gao
2020 J jnl
MCMC Guided CNN Training and Segmentation for Pancreas Extraction.
CoRR
Jinchan He, Xiaxia Yu, Chudong Cai, Yi Gao
2019 B conf
Is hippocampus getting bumpier with age: a quantitative analysis of fine-scale dentational feature under the hippocampus on 552 healthy subjects.
Image Processing
Shuxiu Cai, Xiaxia Yu, Qiaochu Zhang, Chuan Huang, Yi Gao
2019 J jnl
Sparse autoencoder for unsupervised nucleus detection and representation in histopathology images.
Pattern Recognit.
Le Hou, Vu Nguyen, Ariel B. Kanevsky, Dimitris Samaras, Tahsin M. Kurç, Tianhao Zhao, Rajarsi R. Gupta, Yi Gao, Wenjin Chen, David J. Foran, Joel H. Saltz
2017 J jnl
Algorithm sensitivity analysis and parameter tuning for tissue image segmentation pipelines.
Bioinform.
George Teodoro, Tahsin M. Kurç, Luis F. R. Taveira, Alba C. M. A. Melo, Yi Gao
2017 J jnl
Cerebrospinal and interstitial fluid transport via the glymphatic pathway modeled by optimal mass transport.
NeuroImage
Vadim Ratner, Yi Gao, Hedok Lee, Rena Elkin, Maiken Nedergaard, Helene Benveniste, Allen R. Tannenbaum
2017 A conf
ConvNets with Smooth Adaptive Activation Functions for Regression.
AISTATS
Le Hou, Dimitris Samaras, Tahsin M. Kurç, Yi Gao, Joel H. Saltz
2017 — conf
Evaluation of nucleus segmentation in digital pathology images through large scale image synthesis.
Digital Pathology
Naiyun Zhou, Xiaxia Yu, Tianhao Zhao, Si Wen, Fusheng Wang, Wei Zhu, Tahsin M. Kurç, Allen R. Tannenbaum, Joel H. Saltz, Yi Gao
2017 J jnl
Large scale digital prostate pathology image analysis combining feature extraction and deep neural network.
CoRR
Naiyun Zhou, Andriy Fedorov, Fiona Fennessy, Ron Kikinis, Yi Gao
2017 J jnl
Sparse Autoencoder for Unsupervised Nucleus Detection and Representation in Histopathology Images.
CoRR
Le Hou, Vu Nguyen, Dimitris Samaras, Tahsin M. Kurç, Yi Gao, Tianhao Zhao, Joel H. Saltz
2016 — conf
Hierarchical nucleus segmentation in digital pathology images.
Digital Pathology
Yi Gao, Vadim Ratner, LiangJia Zhu, Tammy DiPrima, Tahsin M. Kurç, Allen R. Tannenbaum, Joel H. Saltz
2016 — conf
Multi-scale learning based segmentation of glands in digital colonrectal pathology images.
Digital Pathology
Yi Gao, William Liu, Shipra Arjun, LiangJia Zhu, Vadim Ratner, Tahsin M. Kurç, Joel H. Saltz, Allen R. Tannenbaum
2016 J jnl
Neural Networks with Smooth Adaptive Activation Functions for Regression.
CoRR
Le Hou, Dimitris Samaras, Tahsin M. Kurç, Yi Gao, Joel H. Saltz
2016 A* conf
Patch-Based Convolutional Neural Network for Whole Slide Tissue Image Classification.
CVPR
Le Hou, Dimitris Samaras, Tahsin M. Kurç, Yi Gao, James E. Davis, Joel H. Saltz
2016 Misc conf
Safe "cloudification" of large images through picker APIs.
AMIA
Erich Bremer, Tahsin M. Kurç, Yi Gao, Joel H. Saltz, Jonas S. Almeida
2016 J jnl
Statistical shape analysis using 3D Poisson equation - A quantitatively validated approach.
Medical Image Anal.
Yi Gao, Sylvain Bouix
2015 J jnl
A Kalman Filtering Perspective for Multiatlas Segmentation.
SIAM J. Imaging Sci.
Yi Gao, LiangJia Zhu, Joshua Cates, Rob S. MacLeod, Sylvain Bouix, Allen R. Tannenbaum
2015 J jnl
Efficient Multiple Instance Convolutional Neural Networks for Gigapixel Resolution Image Classification.
CoRR
Le Hou, Dimitris Samaras, Tahsin M. Kurç, Yi Gao, James E. Davis, Joel H. Saltz
2015 J jnl
Shape analysis based on depth-ordering.
Medical Image Anal.
Yi Hong, Yi Gao, Marc Niethammer, Sylvain Bouix
2014 J jnl
A Complete System for Automatic Extraction of Left Ventricular Myocardium From CT Images Using Shape Segmentation and Contour Evolution.
IEEE Trans. Image Process.
LiangJia Zhu, Yi Gao, Vikram V. Appia, Anthony J. Yezzi, Chesnal D. Arepalli, Tracy L. Faber, Arthur E. Stillman, Allen R. Tannenbaum
2014 B conf
A framework for joint image-and-shape analysis.
Image Processing
Yi Gao, Allen R. Tannenbaum, Sylvain Bouix
2014 — conf
Depth-Based Shape-Analysis.
MICCAI (3)
Yi Hong, Yi Gao, Marc Niethammer, Sylvain Bouix
2014 B conf
Interpolation of longitudinal shape and image data via optimal mass transport.
Image Processing
Yi Gao, LiangJia Zhu, Sylvain Bouix, Allen R. Tannenbaum
2014 — conf
Reconstruction and feature selection for desorption electrospray ionization mass spectroscopy imagery.
Image-Guided Procedures
Yi Gao, LiangJia Zhu, Isaiah Norton, Nathalie Y. R. Agar, Allen R. Tannenbaum
2014 — conf
Signed poisson map for shape analysis.
ISBI
Yi Gao, Sylvain Bouix
2014 J jnl
Statistical Shape Analysis of Neuroanatomical Structures via Level-Set-based Shape Morphing.
SIAM J. Imaging Sci.
Tammy Riklin Raviv, Yi Gao, James J. Levitt, Sylvain Bouix
2013 J jnl
Automatic Delineation of the Myocardial Wall From CT Images Via Shape Segmentation and Variational Region Growing.
IEEE Trans. Biomed. Eng.
LiangJia Zhu, Yi Gao, Vikram V. Appia, Anthony J. Yezzi, Chesnal D. Arepalli, Tracy L. Faber, Arthur E. Stillman, Allen R. Tannenbaum
2013 J jnl
Automatic Segmentation of the Left Atrium From MR Images via Variational Region Growing With a Moments-Based Shape Prior.
IEEE Trans. Image Process.
LiangJia Zhu, Yi Gao, Anthony J. Yezzi, Allen R. Tannenbaum
2013 J jnl
Sparse Texture Active Contour.
IEEE Trans. Image Process.
Yi Gao, Sylvain Bouix, Martha Elizabeth Shenton, Allen R. Tannenbaum
2012 J jnl
A 3D interactive multi-object segmentation tool using local robust statistics driven active contours.
Medical Image Anal.
Yi Gao, Ron Kikinis, Sylvain Bouix, Martha Elizabeth Shenton, Allen R. Tannenbaum
2012 — conf
Automatic segmentation of the left atrium from MRI images using salient feature and contour evolution.
EMBC
LiangJia Zhu, Yi Gao, Anthony J. Yezzi, Robert S. MacLeod, Joshua Cates, Allen R. Tannenbaum
2012 J jnl
Filtering in the Diffeomorphism Group and the Registration of Point Sets.
IEEE Trans. Image Process.
Yi Gao, Yogesh Rathi, Sylvain Bouix, Allen R. Tannenbaum
2012 J jnl
Multiscale 3D shape representation and segmentation with applications to hippocampal/caudate extraction from brain MRI.
Medical Image Anal.
Yi Gao, Benjamin Corn, Dan Schifter, Allen R. Tannenbaum
2012 — conf
Statistical Shape Analysis for Population Studies via Level-Set Based Shape Morphing.
ECCV Workshops (1)
Tammy Riklin Raviv, Yi Gao, James J. Levitt, Sylvain Bouix
2012 — conf
Synthesis of Realistic Subcortical Anatomy with Known Surface Deformations.
MeshMed
Yi Gao, Sylvain Bouix
2012 J jnl
Volumetric Mapping of Genus Zero Objects via Mass Preservation
CoRR
Romeil Sandhu, Ayelet Dominitz, Yi Gao, Allen R. Tannenbaum
2011 — conf
Combining atlas and active contour for automatic 3D medical image segmentation.
ISBI
Yi Gao, Allen R. Tannenbaum
2011 — conf
Estimation of myocardial volume at risk from CT angiography.
Computer-Aided Diagnosis
LiangJia Zhu, Yi Gao, Vandana Mohan, Arthur E. Stillman, Tracy L. Faber, Allen R. Tannenbaum
2010 B conf
'Active contour without edges', on parametric manifolds.
Image Processing
Yi Gao, Allen R. Tannenbaum
2010 J jnl
A Coupled Global Registration and Segmentation Framework With Application to Magnetic Resonance Prostate Imagery.
IEEE Trans. Medical Imaging
Yi Gao, Romeil Sandhu, Gabor Fichtinger, Allen R. Tannenbaum
2010 B conf
Fast Hamilton-Jacobi equation solver and neural fiber bundle extraction.
Image Processing
Yi Gao, John Melonakos, Allen R. Tannenbaum
2010 B conf
Image processing and registration in a point set representation.
Image Processing
Yi Gao, Allen R. Tannenbaum
2010 B conf
Segmentation of the endocardial wall of the left atrium using local region-based active contours and statistical shape learning.
Image Processing
Yi Gao, Behnood Gholami, Robert S. MacLeod, Joshua Blauer, Wassim M. Haddad, Allen R. Tannenbaum
2010 B conf
Shape based MRI prostate image segmentation using local information driven directional distance Bayesian method.
Image Processing
Yi Gao, Allen R. Tannenbaum
2010 — conf
Simultaneous Multi-object Segmentation Using Local Robust Statistics and Contour Interaction.
MCV
Yi Gao, Allen R. Tannenbaum, Ron Kikinis
2007 B conf
Tissue tracking: applications for brain MRI classification.
Image Processing
John Melonakos, Yi Gao, Allen R. Tannenbaum