Yi-Ping Phoebe Chen

300 papers A* 10A 4B 25C 11Misc 5Journal 186Unranked 55

Year	Rank	Type	Title / Venue / Authors
2026	J	`jnl`	Deep Imputation Bi-Stochastic Graph Regularized Matrix Factorization for Clustering Single-Cell RNA-Sequencing Data. IEEE Trans. Comput. Biol. Bioinform. Wei Lan, Jianwei Chen, Mingyang Liu, Qingfeng Chen, Jin Liu, Jianxin Wang, Yi-Ping Phoebe Chen
2026	J	`jnl`	Fine-grained food image classification with multi-modal collaboration. Neurocomputing Li Cheng, Linyi Lan, Zhongjie Xiao, Jianzhang Chen, Jiaxiong Lu, Huanrong Wang, Yi-Ping Phoebe Chen
2026	J	`jnl`	Guest Editorial for the 21th Asia Pacific Bioinformatics Conference. IEEE Trans. Comput. Biol. Bioinform. Min Li, Feng Luo, Yi-Ping Phoebe Chen
2026	J	`jnl`	Learning-Based User Admission Control for Large-Scale Cell-Free Massive MIMO. IEEE Trans. Commun. Yijie Gao, Peng Cheng, Zhuo Chen, Khoa Tran Phan, Wei Xiang, Yi-Ping Phoebe Chen
2026	J	`jnl`	MF-PEAR-net: a multi-scale feature guided project-&-excite affine registration network for CT images. Multim. Syst. Ronald Bbosa, Feng Liu, Kafui Efio-Akolly, Omar A. M. Salem, Yi-Ping Phoebe Chen
2026	J	`jnl`	Spectrally Distilled Representations Aligned with Instruction-Augmented LLMs for Satellite Imagery. CoRR Minh Kha Do, Wei Xiang, Kang Han, Di Wu, Khoa Phan, Yi-Ping Phoebe Chen, Gaowen Liu, Ramana Rao Kompella
2025	J	`jnl`	Agri-LLM: Prompt-Based Large Language Model for Emission Data Analytics in Smart Agriculture. IEEE Internet Things J. Le Fang, Wei Xiang, Jiong Jin, Kewen Liao, Chang Liu, Yu Han, Flora D. Salim, Yi-Ping Phoebe Chen
2025	J	`jnl`	CLTDA: Identifying Associations Between tsRNAs and Diseases Based on Contrastive Learning. Big Data Min. Anal. Wei Lan, Wenyi Chen, Chunling Li, Qingfeng Chen, Wei Peng, Yi-Ping Phoebe Chen, Xiaoshu Zhu
2025	J	`jnl`	Establishing the Asia & Pacific Bioinformatics Joint Congress: a historic milestone in regional bioinformatics collaboration. Briefings Bioinform. Asif M. Khan, Susumu Goto, Kenta Nakai, Limsoon Wong, Diane E. Kovats, Yuki Saito, Shinya Ikematsu, Yoshihiro Yamanishi, Nurul Salwanie Che Wahid, Harpreet Singh, Pradeep Eranti, Yi-Ping Phoebe Chen, Tae-Min Kim, Shinn-Ying Ho, Jessica Cara Mar, Wataru Iwasaki, Jayaraman Valadi, Prashanth Suravajhala, Christian Schönbach, Tin Wee Tan, Shoba Ranganathan, Kiyoko F. Aoki-Kinoshita
2025	J	`jnl`	GA-S CoRR Yunyao Zhang, Zikai Song, Hang Zhou, Wenfeng Ren, Yi-Ping Phoebe Chen, Junqing Yu, Wei Yang
2025	—	`conf`	GA-S³: Comprehensive Social Network Simulation with Group Agents. ACL (Findings) Yunyao Zhang, Zikai Song, Hang Zhou, Wenfeng Ren, Yi-Ping Phoebe Chen, Junqing Yu, Wei Yang
2025	A	`conf`	H-QuEST: Accelerating Query-by-Example Spoken Term Detection with Hierarchical Indexing. INTERSPEECH Akanksha Singh, Yi-Ping Phoebe Chen, Vipul Arora
2025	J	`jnl`	HyperFusion: Hierarchical Multimodal Ensemble Learning for Social Media Popularity Prediction. CoRR Liliang Ye, Yunyao Zhang, Yafeng Wu, Yi-Ping Phoebe Chen, Junqing Yu, Wei Yang, Zikai Song
2025	A*	`conf`	MVP: Winning Solution to SMP Challenge 2025 Video Track. ACM Multimedia Liliang Ye, Yunyao Zhang, Yafeng Wu, Yi-Ping Phoebe Chen, Junqing Yu, Wei Yang, Zikai Song
2025	J	`jnl`	MVP: Winning Solution to SMP Challenge 2025 Video Track. CoRR Liliang Ye, Yunyao Zhang, Yafeng Wu, Yi-Ping Phoebe Chen, Junqing Yu, Wei Yang, Zikai Song
2025	A*	`conf`	SF2T: Self-supervised Fragment Finetuning of Video-LLMs for Fine-Grained Understanding. CVPR Yangliu Hu, Zikai Song, Na Feng, Yawei Luo, Junqing Yu, Yi-Ping Phoebe Chen, Wei Yang
2025	J	`jnl`	SF2T: Self-supervised Fragment Finetuning of Video-LLMs for Fine-Grained Understanding. CoRR Yangliu Hu, Zikai Song, Na Feng, Yawei Luo, Junqing Yu, Yi-Ping Phoebe Chen, Wei Yang
2025	J	`jnl`	Spatiotemporal Pretrained Large Language Model for Forecasting With Missing Values. IEEE Internet Things J. Le Fang, Wei Xiang, Shirui Pan, Flora D. Salim, Yi-Ping Phoebe Chen
2025	A*	`conf`	Temporal Coherent Object Flow for Multi-Object Tracking. AAAI Zikai Song, Run Luo, Lintao Ma, Ying Tang, Yi-Ping Phoebe Chen, Junqing Yu, Wei Yang
2025	J	`jnl`	The Large Language Models on Biomedical Data Analysis: A Survey. IEEE J. Biomed. Health Informatics Wei Lan, Zhentao Tang, Mingyang Liu, Qingfeng Chen, Wei Peng, Yi-Ping Phoebe Chen, Yi Pan
2024	J	`jnl`	A Scalable Energy Consumption Optimization in Downlink Cell-Free Massive MIMO. IEEE Wirel. Commun. Lett. Yijie Gao, Peng Cheng, Zhuo Chen, Khoa Tran Phan, Wei Xiang, Yi-Ping Phoebe Chen
2024	—	`conf`	An efficient TF-IDF based Query by Example Spoken Term Detection. CAI Akanksha Singh, Vipul Arora, Yi-Ping Phoebe Chen
2024	A*	`conf`	Autogenic Language Embedding for Coherent Point Tracking. ACM Multimedia Zikai Song, Ying Tang, Run Luo, Lintao Ma, Junqing Yu, Yi-Ping Phoebe Chen, Wei Yang
2024	J	`jnl`	Autogenic Language Embedding for Coherent Point Tracking. CoRR Zikai Song, Ying Tang, Run Luo, Lintao Ma, Junqing Yu, Yi-Ping Phoebe Chen, Wei Yang
2024	J	`jnl`	Centralized and Federated Learning for COVID-19 Detection With Chest X-Ray Images: Implementations and Analysis. IEEE Trans. Emerg. Top. Comput. Intell. Sadaf Naz, Khoa Tran Phan, Yi-Ping Phoebe Chen
2024	J	`jnl`	Correlation-Aware Spatial-Temporal Graph Learning for Multivariate Time-Series Anomaly Detection. IEEE Trans. Neural Networks Learn. Syst. Yu Zheng, Huan Yee Koh, Ming Jin, Lianhua Chi, Khoa Tran Phan, Shirui Pan, Yi-Ping Phoebe Chen, Wei Xiang
2024	J	`jnl`	DeepKEGG: a multi-omics data integration framework with biological insights for cancer recurrence prediction and biomarker discovery. Briefings Bioinform. Wei Lan, Haibo Liao, Qingfeng Chen, Lingzhi Zhu, Yi Pan, Yi-Ping Phoebe Chen
2024	B	`conf`	Diversity in Multimedia. ICMR Yi-Ping Phoebe Chen
2024	J	`jnl`	Dual attention based fusion network for MCI Conversion Prediction. Comput. Biol. Medicine Min Luo, Zhen He, Hui Cui, Phillip Ward, Yi-Ping Phoebe Chen
2024	J	`jnl`	Editorial: The 21st Asian Pacific Bioinformatics Conference 2023. Comput. Biol. Chem. Min Li, Yi-Ping Phoebe Chen
2024	J	`jnl`	FairStream: Fair Multimedia Streaming Benchmark for Reinforcement Learning Agents. CoRR Jannis Weil, Jonas Ringsdorf, Julian Barthel, Yi-Ping Phoebe Chen, Tobias Meuser
2024	—	`conf`	GCLNSTDA: Predicting tsRNA-Disease Association Based on Contrastive Learning and Negative Sampling. BCB Wei Lan, Wenyi Chen, Chunling Li, Qingfeng Chen, Yi-Ping Phoebe Chen, Yi Pan
2024	J	`jnl`	Graph Spatiotemporal Process for Multivariate Time Series Anomaly Detection with Missing Values. CoRR Yu Zheng, Huan Yee Koh, Ming Jin, Lianhua Chi, Haishuai Wang, Khoa Tran Phan, Yi-Ping Phoebe Chen, Shirui Pan, Wei Xiang
2024	J	`jnl`	Graph spatiotemporal process for multivariate time series anomaly detection with missing values. Inf. Fusion Yu Zheng, Huan Yee Koh, Ming Jin, Lianhua Chi, Haishuai Wang, Khoa Tran Phan, Yi-Ping Phoebe Chen, Shirui Pan, Wei Xiang
2024	J	`jnl`	Guest Editorial Guest Editorial for the 20th Asia Pacific Bioinformatics Conference. IEEE ACM Trans. Comput. Biol. Bioinform. Su Datt Lam, Wai Keat Yam, Yi-Ping Phoebe Chen
2024	J	`jnl`	Intervention scenarios and robot capabilities for support, guidance and health monitoring for the elderly. Comput. Sci. Rev. Saja Aldawsari, Yi-Ping Phoebe Chen
2024	J	`jnl`	LGCDA: Predicting CircRNA-Disease Association Based on Fusion of Local and Global Features. IEEE ACM Trans. Comput. Biol. Bioinform. Wei Lan, Chunling Li, Qingfeng Chen, Ning Yu, Yi Pan, Yu Zheng, Yi-Ping Phoebe Chen
2024	J	`jnl`	MMAR-Net: A Multi-Stride and Multi-Resolution Affine Registration Network for CT Images. Big Data Min. Anal. Fu Zhou, Fei Luo, Ruoshan Kong, Yi-Ping Phoebe Chen, Feng Liu
2024	—	`conf`	Modeling Single-Cell ATAC-Seq Data Based on Contrastive Learning. ISBRA (1) Wei Lan, Weihao Zhou, Qingfeng Chen, Ruiqing Zheng, Yi Pan, Yi-Ping Phoebe Chen
2024	—	`conf`	PN-Quant: An Automated Pulmonary Nodule Quantification Method for Full-Size CT Scans. BIBM Xinkai Tang, Zhiyu Zhu, Shengjuan Guo, Feng Liu, Yi-Ping Phoebe Chen, Wencai Huang, Jia Ni Zou
2024	—	`conf`	SCS-Voxel2Mesh: a Self-Calibrated Separable 3D Mesh Generation Network for Lung Nodule Spikes Classification and Malignancy Prediction. BIBM Ronald Bbosa, Jia Ni Zou, Kafui Efio-Akolly, Yi-Ping Phoebe Chen, Wen Cai Huang, Feng Liu
2024	J	`jnl`	Semantic Distance Adversarial Learning for Text-to-Image Synthesis. IEEE Trans. Multim. Bowen Yuan, Yefei Sheng, Bing-Kun Bao, Yi-Ping Phoebe Chen, Changsheng Xu
2024	J	`jnl`	The integration of knowledge graph convolution network with denoising autoencoder. Eng. Appl. Artif. Intell. Gurinder Kaur, Fei Liu, Yi-Ping Phoebe Chen
2024	J	`jnl`	Validating Siamese embedded neural networks with identical representations for efficient model convergence. Knowl. Based Syst. Mathias Hoy Talbo, Haishuai Wang, Lianhua Chi, Yi-Ping Phoebe Chen
2023	J	`jnl`	A Fast and More Accurate Seed-and-Extension Density-Based Clustering Algorithm. IEEE Trans. Knowl. Data Eng. Ming-Hao Tung, Yi-Ping Phoebe Chen, Chen-Yu Liu, Chung-Shou Liao
2023	J	`jnl`	Applying staged event-driven access control to combat ransomware. Comput. Secur. Timothy R. McIntosh, A. S. M. Kayes, Yi-Ping Phoebe Chen, Alex Ng, Paul A. Watters
2023	J	`jnl`	Benchmarking of computational methods for predicting circRNA-disease associations. Briefings Bioinform. Wei Lan, Yi Dong, Hongyu Zhang, Chunling Li, Qingfeng Chen, Jin Liu, Jianxin Wang, Yi-Ping Phoebe Chen
2023	J	`jnl`	Class activation attention transfer neural networks for MCI conversion prediction. Comput. Biol. Medicine Min Luo, Zhen He, Hui Cui, Yi-Ping Phoebe Chen, Phillip Ward
2023	A*	`conf`	Compact Transformer Tracker with Correlative Masked Modeling. AAAI Zikai Song, Run Luo, Junqing Yu, Yi-Ping Phoebe Chen, Wei Yang
2023	J	`jnl`	Compact Transformer Tracker with Correlative Masked Modeling. CoRR Zikai Song, Run Luo, Junqing Yu, Yi-Ping Phoebe Chen, Wei Yang
2023	J	`jnl`	Correlation-aware Spatial-Temporal Graph Learning for Multivariate Time-series Anomaly Detection. CoRR Yu Zheng, Huan Yee Koh, Ming Jin, Lianhua Chi, Khoa Tran Phan, Shirui Pan, Yi-Ping Phoebe Chen, Wei Xiang
2023	—	`conf`	DFNodule: a Novel Deformable Faster R-CNN for Lung Nodule Detection. BIBM Guowei Tao, Fu Zhou, Feng Liu, Hao Gui, Fei Luo, Wen Cai Huang, Jia Ni Zou, Yi-Ping Phoebe Chen
2023	J	`jnl`	Deep Reinforcement Learning for Online Resource Allocation in IoT Networks: Technology, Development, and Future Challenges. IEEE Commun. Mag. Peng Cheng, Youjia Chen, Ming Ding, Zhuo Chen, Sige Liu, Yi-Ping Phoebe Chen
2023	J	`jnl`	Deep learning exploration of single-cell and spatially resolved cancer transcriptomics to unravel tumour heterogeneity. Comput. Biol. Medicine Raid Halawani, Michael Buchert, Yi-Ping Phoebe Chen
2023	J	`jnl`	DeepMNF: Deep Multimodal Neuroimaging Framework for Diagnosing Autism Spectrum Disorder. Artif. Intell. Medicine Syed Qasim Abbas, Lianhua Chi, Yi-Ping Phoebe Chen
2023	J	`jnl`	Generative and Contrastive Self-Supervised Learning for Graph Anomaly Detection. IEEE Trans. Knowl. Data Eng. Yu Zheng, Ming Jin, Yixin Liu, Lianhua Chi, Khoa Tran Phan, Yi-Ping Phoebe Chen
2023	A	`conf`	SoK: Systematizing Attack Studies in Federated Learning - From Sparseness to Completeness. AsiaCCS Geetanjli Sharma, M. A. P. Chamikara, Mohan Baruwal Chhetri, Yi-Ping Phoebe Chen
2023	J	`jnl`	Transformed domain convolutional neural network for Alzheimer's disease diagnosis using structural MRI. Pattern Recognit. Syed Qasim Abbas, Lianhua Chi, Yi-Ping Phoebe Chen
2023	J	`jnl`	eX-ViT: A Novel explainable vision transformer for weakly supervised semantic segmentation. Pattern Recognit. Lu Yu, Wei Xiang, Juan Fang, Yi-Ping Phoebe Chen, Lianhua Chi
2022	J	`jnl`	A blockchain-based application for genomic access and variant discovery using smart contracts and homomorphic encryption. Future Gener. Comput. Syst. Abukari Mohammed Yakubu, Yi-Ping Phoebe Chen
2022	J	`jnl`	A comprehensive review of federated learning for COVID-19 detection. Int. J. Intell. Syst. Sadaf Naz, Khoa Tran Phan, Yi-Ping Phoebe Chen
2022	J	`jnl`	A novel explainable neural network for Alzheimer's disease diagnosis. Pattern Recognit. Lu Yu, Wei Xiang, Juan Fang, Yi-Ping Phoebe Chen, Ruifeng Zhu
2022	J	`jnl`	Advanced calibration of mortality prediction on cardiovascular disease using feature-based artificial neural network. Expert Syst. Appl. Linh Tran, Alessio Bonti, Lianhua Chi, Mohamed Abdelrazek, Yi-Ping Phoebe Chen
2022	C	`conf`	Aggregated Bidirectional Local Binary Pattern for Robust Perceptual Image Hashing. ISM Syed Qasim Abbas, S. Jannat Shirazi, Yi-Ping Phoebe Chen
2022	A*	`conf`	Balanced Contrastive Learning for Long-Tailed Visual Recognition. CVPR Jianggang Zhu, Zheng Wang, Jingjing Chen, Yi-Ping Phoebe Chen, Yu-Gang Jiang
2022	J	`jnl`	Balanced Contrastive Learning for Long-Tailed Visual Recognition. CoRR Jianggang Zhu, Zheng Wang, Jingjing Chen, Yi-Ping Phoebe Chen, Yu-Gang Jiang
2022	J	`jnl`	Classification of Diabetic Retinopathy Severity Based on GCA Attention Mechanism. IEEE Access Binhua Yang, Tongyan Li, Haidi Xie, Yulin Liao, Yi-Ping Phoebe Chen
2022	J	`jnl`	Editorial. IEEE ACM Trans. Comput. Biol. Bioinform. Hsiao-Fang Sunny Sun, Yi-Ping Phoebe Chen
2022	J	`jnl`	Effective fuzzy joint mutual information feature selection based on uncertainty region for classification problem. Knowl. Based Syst. Omar A. M. Salem, Feng Liu, Yi-Ping Phoebe Chen, Ahmed Hamed, Xi Chen
2022	J	`jnl`	From Unsupervised to Few-shot Graph Anomaly Detection: A Multi-scale Contrastive Learning Approach. CoRR Yu Zheng, Ming Jin, Yixin Liu, Lianhua Chi, Khoa Tran Phan, Shirui Pan, Yi-Ping Phoebe Chen
2022	—	`conf`	Fuzzy Information Measures Feature Selection Using Descriptive Statistics Data. KSEM (3) Omar A. M. Salem, Haowen Liu, Feng Liu, Yi-Ping Phoebe Chen, Xi Chen
2022	J	`jnl`	Fuzzy joint mutual information feature selection based on ideal vector. Expert Syst. Appl. Omar A. M. Salem, Feng Liu, Yi-Ping Phoebe Chen, Ahmed Hamed, Xi Chen
2022	J	`jnl`	GANLDA: Graph attention network for lncRNA-disease associations prediction. Neurocomputing Wei Lan, Ximin Wu, Qingfeng Chen, Wei Peng, Jianxin Wang, Yi-Ping Phoebe Chen
2022	J	`jnl`	IGNSCDA: Predicting CircRNA-Disease Associations Based on Improved Graph Convolutional Network and Negative Sampling. IEEE ACM Trans. Comput. Biol. Bioinform. Wei Lan, Yi Dong, Qingfeng Chen, Jin Liu, Jianxin Wang, Yi-Ping Phoebe Chen, Shirui Pan
2022	J	`jnl`	KGANCDA: predicting circRNA-disease associations based on knowledge graph attention network. Briefings Bioinform. Wei Lan, Yi Dong, Qingfeng Chen, Ruiqing Zheng, Jin Liu, Yi Pan, Yi-Ping Phoebe Chen
2022	J	`jnl`	LDICDL: LncRNA-Disease Association Identification Based on Collaborative Deep Learning. IEEE ACM Trans. Comput. Biol. Bioinform. Wei Lan, Dehuan Lai, Qingfeng Chen, Ximin Wu, Baoshan Chen, Jin Liu, Jianxin Wang, Yi-Ping Phoebe Chen
2022	J	`jnl`	Multi-Classes and Motion Properties for Concurrent Visual SLAM in Dynamic Environments. IEEE Trans. Multim. Bohong Yang, Wu Ran, Lin Wang, Hong Lu, Yi-Ping Phoebe Chen
2022	J	`jnl`	Ransomware Mitigation in the Modern Era: A Comprehensive Review, Research Challenges, and Future Directions. ACM Comput. Surv. Timothy R. McIntosh, A. S. M. Kayes, Yi-Ping Phoebe Chen, Alex Ng, Paul A. Watters
2022	A*	`conf`	Transformer Tracking with Cyclic Shifting Window Attention. CVPR Zikai Song, Junqing Yu, Yi-Ping Phoebe Chen, Wei Yang
2022	J	`jnl`	Transformer Tracking with Cyclic Shifting Window Attention. CoRR Zikai Song, Junqing Yu, Yi-Ping Phoebe Chen, Wei Yang
2022	J	`jnl`	eX-ViT: A Novel eXplainable Vision Transformer for Weakly Supervised Semantic Segmentation. CoRR Lu Yu, Wei Xiang, Juan Fang, Yi-Ping Phoebe Chen, Lianhua Chi
2021	J	`jnl`	A New Method for Extracting Individual Plant Bio-Characteristics from High-Resolution Digital Images. Remote. Sens. Saba Rabab, Edmond Breen, Alem Gebremedhin, Fan Shi, Pieter Badenhorst, Yi-Ping Phoebe Chen, Hans D. Daetwyler
2021	B	`conf`	Concept-based Topic Attention for a Convolutional Sequence Document Summarization Model. IJCNN Shirin Akther Khanam, Fei Liu, Yi-Ping Phoebe Chen
2021	J	`jnl`	Descriptive prediction of drug side-effects using a hybrid deep learning model. Int. J. Intell. Syst. Chun Yen Lee, Yi-Ping Phoebe Chen
2021	B	`conf`	Distractor-Aware Tracker with a Domain-Special Optimized Benchmark for Soccer Player Tracking. ICMR Zikai Song, Zhiwen Wan, Wei Yuan, Ying Tang, Junqing Yu, Yi-Ping Phoebe Chen
2021	J	`jnl`	Dynamic user-centric access control for detection of ransomware attacks. Comput. Secur. Timothy R. McIntosh, A. S. M. Kayes, Yi-Ping Phoebe Chen, Alex Ng, Paul A. Watters
2021	J	`jnl`	Enforcing situation-aware access control to build malware-resilient file systems. Future Gener. Comput. Syst. Timothy R. McIntosh, Paul A. Watters, A. S. M. Kayes, Alex Ng, Yi-Ping Phoebe Chen
2021	J	`jnl`	Feature selection and threshold method based on fuzzy joint mutual information. Int. J. Approx. Reason. Omar A. M. Salem, Feng Liu, Yi-Ping Phoebe Chen, Xi Chen
2021	J	`jnl`	FexRNA: Exploratory Data Analysis and Feature Selection of Non-Coding RNA. IEEE ACM Trans. Comput. Biol. Bioinform. Noorul Amin, Annette McGrath, Yi-Ping Phoebe Chen
2021	J	`jnl`	Generative and Contrastive Self-Supervised Learning for Graph Anomaly Detection. CoRR Yu Zheng, Ming Jin, Yixin Liu, Lianhua Chi, Khoa Tran Phan, Yi-Ping Phoebe Chen
2021	J	`jnl`	Genetic source completeness of HIV-1 circulating recombinant forms (CRFs) predicted by multi-label learning. Bioinform. Runbin Tang, Zuguo Yu, Yuanlin Ma, Yaoqun Wu, Yi-Ping Phoebe Chen, Limsoon Wong, Jinyan Li
2021	J	`jnl`	Guest Editorial for the 17th Asia Pacific Bioinformatics Conference. IEEE ACM Trans. Comput. Biol. Bioinform. Louxin Zhang, Shaoliang Peng, Yi-Ping Phoebe Chen, David Sankoff, Guoliang Li, Hong-Yu Zhang
2021	—	`conf`	HAUNet-3D: a Novel Hierarchical Attention 3D UNet for Lung Nodule Segmentation. BIBM Fu Zhou, Fei Luo, Kafui Efio-Akolly, Ronald Bbosa, Wen Cai Huang, Jia Ni Zou, Yi-Ping Phoebe Chen, Feng Liu
2021	J	`jnl`	ILDMSF: Inferring Associations Between Long Non-Coding RNA and Disease Based on Multi-Similarity Fusion. IEEE ACM Trans. Comput. Biol. Bioinform. Qingfeng Chen, Dehuan Lai, Wei Lan, Ximin Wu, Baoshan Chen, Jin Liu, Yi-Ping Phoebe Chen, Jianxin Wang
2021	J	`jnl`	Joint knowledge-powered topic level attention for a convolutional text summarization model. Knowl. Based Syst. Shirin Akther Khanam, Fei Liu, Yi-Ping Phoebe Chen
2021	J	`jnl`	Machine learning for medical imaging-based COVID-19 detection and diagnosis. Int. J. Intell. Syst. Rokaya Rehouma, Michael Buchert, Yi-Ping Phoebe Chen
2021	J	`jnl`	MedFused: A framework to discover the relationships between drug chemical functional group impacts and side effects. Comput. Biol. Medicine M. A. P. Chamikara, Yi-Ping Phoebe Chen
2021	Misc	`conf`	Multi-Directional Convolution Networks with Spatial-Temporal Feature Pyramid Module for Action Recognition. ICASSP Bohong Yang, Zijian Wang, Wu Ran, Hong Lu, Yi-Ping Phoebe Chen
2021	J	`jnl`	New Insights Into Drug Repurposing for COVID-19 Using Deep Learning. IEEE Trans. Neural Networks Learn. Syst. Chun Yen Lee, Yi-Ping Phoebe Chen
2021	J	`jnl`	Novel Multidimensional Collaborative Filtering Algorithm Based on Improved Item Rating Prediction. Sci. Program. Tongyan Li, Yingxiang Li, Yi-Ping Phoebe Chen
2021	J	`jnl`	Perceptual image hashing using transform domain noise resistant local binary pattern. Multim. Tools Appl. Syed Qasim Abbas, Fawad Ahmed, Yi-Ping Phoebe Chen
2021	J	`jnl`	Prediction of drug adverse events using deep learning in pharmaceutical discovery. Briefings Bioinform. Chun Yen Lee, Yi-Ping Phoebe Chen
2021	J	`jnl`	Reply to: LncADeep performance on full-length transcripts. Nat. Mach. Intell. Noorul Amin, Annette McGrath, Yi-Ping Phoebe Chen
2021	—	`conf`	Shot Boundary Detection Through Multi-stage Deep Convolution Neural Network. MMM (1) Tingting Wang, Na Feng, Junqing Yu, Yunfeng He, Yangliu Hu, Yi-Ping Phoebe Chen
2021	J	`jnl`	Tracking Neutrophil Migration in Zebrafish Model Using Multi-Channel Feature Learning. IEEE J. Biomed. Health Informatics Marzieh R. Moghadam, Yi-Ping Phoebe Chen
2021	J	`jnl`	Tracking leukocytes in intravital time lapse images using 3D cell association learning network. Artif. Intell. Medicine Marzieh R. Moghadam, Yi-Ping Phoebe Chen
2020	J	`jnl`	A Human-Machine Language Dictionary. Int. J. Comput. Intell. Syst. Fei Liu, Shirin Akther Khanam, Yi-Ping Phoebe Chen
2020	J	`jnl`	Author Correction: Evaluation of deep learning in non-coding RNA classification. Nat. Mach. Intell. Noorul Amin, Annette McGrath, Yi-Ping Phoebe Chen
2020	J	`jnl`	CircR2Cancer: a manually curated database of associations between circRNAs and cancers. Database J. Biol. Databases Curation Wei Lan, Mingrui Zhu, Qingfeng Chen, Baoshan Chen, Jin Liu, Min Li, Yi-Ping Phoebe Chen
2020	J	`jnl`	Conjoint Knowledge Discovery Utilizing Data and Content with Applications in Business, Bio-medicine, Transport Logistics and Electrical Power Systems. Comput. Syst. Sci. Eng. Tharam S. Dillon, Yi-Ping Phoebe Chen, Elizabeth Chang, Mukesh K. Mohania, Vish Ramakonar
2020	J	`jnl`	Designing secure substitution boxes based on permutation of symmetric group. Neural Comput. Appl. Amir Anees, Yi-Ping Phoebe Chen
2020	J	`jnl`	Enhancing the Quality of Image Tagging Using a Visio-Textual Knowledge Base. IEEE Trans. Multim. Chandramani Chaudhary, Poonam Goyal, Dhanashree Nellayi Prasad, Yi-Ping Phoebe Chen
2020	J	`jnl`	Ensemble Fuzzy Feature Selection Based on Relevancy, Redundancy, and Dependency Criteria. Entropy Omar A. M. Salem, Feng Liu, Yi-Ping Phoebe Chen, Xi Chen
2020	J	`jnl`	Ensuring privacy and security of genomic data and functionalities. Briefings Bioinform. Abukari Mohammed Yakubu, Yi-Ping Phoebe Chen
2020	J	`jnl`	Erratum to: Identifying miRNA-disease association based on integrating miRNA topological similarity and functional similarity. Quant. Biol. Qingfeng Chen, Zhao Zhe, Wei Lan, Ruchang Zhang, Zhiqiang Wang, Cheng Luo, Yi-Ping Phoebe Chen
2020	—	`conf`	Fine-Grain Level Sports Video Search Engine. MMM (1) Zikai Song, Junqing Yu, Hengyou Cai, Yangliu Hu, Yi-Ping Phoebe Chen
2020	J	`jnl`	Image Retrieval for Complex Queries Using Knowledge Embedding. ACM Trans. Multim. Comput. Commun. Appl. Chandramani Chaudhary, Poonam Goyal, Navneet Goyal, Yi-Ping Phoebe Chen
2020	—	`conf`	Neurodiverse Knowledge, Skills and Ability Assessment for Cyber Security. ACIS Joel Scanlan, Andrew Eddy, Teresa Thomas, Tele Tan, Yi-Ping Phoebe Chen, Paul A. Watters, Michael Fieldhouse, Lawrence Fung, Sonya Girdler
2020	B	`ed.`	Proceedings of the 2020 on International Conference on Multimedia Retrieval, ICMR 2020, Dublin, Ireland, June 8-11, 2020. ICMR Cathal Gurrin, Björn Þór Jónsson, Noriko Kando, Klaus Schöffmann, Yi-Ping Phoebe Chen, Noel E. O'Connor
2020	J	`jnl`	SSET: a dataset for shot segmentation, event detection, player tracking in soccer videos. Multim. Tools Appl. Na Feng, Zikai Song, Junqing Yu, Yi-Ping Phoebe Chen, Yizhu Zhao, Yunfeng He, Tao Guan
2019	J	`jnl`	A novel multimodal clustering framework for images with diverse associated text. Multim. Tools Appl. Chandramani Chaudhary, Poonam Goyal, Siddhant Tuli, Shuchita Banthia, Navneet Goyal, Yi-Ping Phoebe Chen
2019	J	`jnl`	Comprehensive structured knowledge base system construction with natural language presentation. Hum. centric Comput. Inf. Sci. Shirin Akther Khanam, Fei Liu, Yi-Ping Phoebe Chen
2019	—	`conf`	Detection of Cell Types from Single-cell RNA-seq Data using Similarity via Kernel Preserving Learning Embedding. BIBM Zeming Liu, Feng Liu, Chengzhi Hong, Meng Gao, Yi-Ping Phoebe Chen, Shichao Liu, Wen Zhang
2019	J	`jnl`	Editorial. IEEE ACM Trans. Comput. Biol. Bioinform. Shuigeng Zhou, Yi-Ping Phoebe Chen, Hiroshi Mamitsuka
2019	J	`jnl`	Evaluation of deep learning in non-coding RNA classification. Nat. Mach. Intell. Noorul Amin, Annette McGrath, Yi-Ping Phoebe Chen
2019	J	`jnl`	Guest Editorial for the 16th Asia Pacific Bioinformatics Conference. IEEE ACM Trans. Comput. Biol. Bioinform. Yoshihiro Yamanishi, Yasubumi Sakakibara, Yi-Ping Phoebe Chen
2019	J	`jnl`	Hybrid deep learning and empirical mode decomposition model for time series applications. Expert Syst. Appl. Hao-Fan Yang, Yi-Ping Phoebe Chen
2019	J	`jnl`	Identifying MiRNA-disease association based on integrating miRNA topological similarity and functional similarity. Quant. Biol. Qingfeng Chen, Zhao Zhe, Wei Lan, Ruchang Zhang, Zhiqiang Wang, Cheng Luo, Yi-Ping Phoebe Chen
2019	J	`jnl`	Optimized Configuration of Exponential Smoothing and Extreme Learning Machine for Traffic Flow Forecasting. IEEE Trans. Ind. Informatics Hao-Fan Yang, Tharam S. Dillon, Elizabeth Chang, Yi-Ping Phoebe Chen
2019	J	`jnl`	Representation learning with extreme learning machines and empirical mode decomposition for wind speed forecasting methods. Artif. Intell. Hao-Fan Yang, Yi-Ping Phoebe Chen
2019	—	`conf`	Structural Network Embedding using Multi-modal Deep Auto-encoders for Predicting Drug-drug Interactions. BIBM Shichao Liu, Ziyang Huang, Yang Qiu, Yi-Ping Phoebe Chen, Wen Zhang
2019	A*	`conf`	TC-GAN: Triangle Cycle-Consistent GANs for Face Frontalization with Facial Features Preserved. ACM Multimedia Juntong Cheng, Yi-Ping Phoebe Chen, Minjun Li, Yu-Gang Jiang
2018	J	`jnl`	Discriminative binary feature learning and quantization in biometric key generation. Pattern Recognit. Amir Anees, Yi-Ping Phoebe Chen
2018	J	`jnl`	Effectively Identifying Compound-Protein Interactions by Learning from Positive and Unlabeled Examples. IEEE ACM Trans. Comput. Biol. Bioinform. Zhanzhan Cheng, Shuigeng Zhou, Yang Wang, Hui Liu, Jihong Guan, Yi-Ping Phoebe Chen
2018	J	`jnl`	GCOTraj: A storage approach for historical trajectory data sets using grid cells ordering. Inf. Sci. Shengxun Yang, Zhen He, Yi-Ping Phoebe Chen
2018	J	`jnl`	Guest Editorial for the 14 IEEE ACM Trans. Comput. Biol. Bioinform. Jijun Tang, Lu Tian, Yi-Ping Phoebe Chen
2018	J	`jnl`	Guest Editorial for the 15th Asia Pacific Bioinformatics Conference. IEEE ACM Trans. Comput. Biol. Bioinform. Lusheng Wang, Shuai Cheng Li, Yi-Ping Phoebe Chen
2018	B	`conf`	Linguistic Patterns and Cross Modality-based Image Retrieval for Complex Queries. ICMR Chandramani Chaudhary, Poonam Goyal, Joel Ruben Antony Moniz, Navneet Goyal, Yi-Ping Phoebe Chen
2017	J	`jnl`	A comprehensive study of RNA secondary structure alignment algorithms. Briefings Bioinform. Jimmy Ka Ho Chiu, Yi-Ping Phoebe Chen
2017	—	`conf`	Exploiting visual and textual neighborhood information to improve image-tag relevance. IEEE BigData Chandramani Chaudhary, Poonam Goyal, Yi-Ping Phoebe Chen
2017	J	`jnl`	Identification of protein complexes by integrating multiple alignment of protein interaction networks. Bioinform. Cheng-Yu Ma, Yi-Ping Phoebe Chen, Bonnie Berger, Chung-Shou Liao
2017	J	`jnl`	Optimized Structure of the Traffic Flow Forecasting Model With a Deep Learning Approach. IEEE Trans. Neural Networks Learn. Syst. Hao-Fan Yang, Tharam S. Dillon, Yi-Ping Phoebe Chen
2017	A*	`ed.`	Proceedings of the 2017 ACM on Multimedia Conference, MM 2017, Mountain View, CA, USA, October 23-27, 2017 ACM Multimedia Qiong Liu, Rainer Lienhart, Haohong Wang, Sheng-Wei "Kuan-Ta" Chen, Susanne Boll, Yi-Ping Phoebe Chen, Gerald Friedland, Jia Li, Shuicheng Yan
2017	J	`jnl`	TACD: a transportable ant colony discrimination model for corporate bankruptcy prediction. Enterp. Inf. Syst. Pooia Lalbakhsh, Yi-Ping Phoebe Chen
2016	C	`conf`	Brain Cancer Diagnosis-Association Rule Based Computational Intelligence Approach. CIT Jesmin Nahar, A. B. M. Shawkat Ali, Tasadduq Imam, Kevin Tickle, Yi-Ping Phoebe Chen
2016	J	`jnl`	Guest Editorial for the 14th Asia Pacific Bioinformatics Conference (APBC2016). Comput. Biol. Chem. Jijun Tang, Lu Tian, Yi-Ping Phoebe Chen
2016	J	`jnl`	Interval-Based Similarity for Classifying Conserved RNA Secondary Structures. IEEE Intell. Syst. Qingfeng Chen, Yi-Ping Phoebe Chen, Chengqi Zhang
2016	J	`jnl`	Introduction to the special issue on GIW 2016. J. Bioinform. Comput. Biol. Shuigeng Zhou, Yi-Ping Phoebe Chen, Hiroshi Mamitsuka
2016	J	`jnl`	PaMeCo join: A parallel main memory compact hash join. Inf. Syst. Steven Keith Begley, Zhen He, Yi-Ping Phoebe Chen
2016	J	`jnl`	Systematic review of virtual speech therapists for speech disorders. Comput. Speech Lang. Yi-Ping Phoebe Chen, Caddi Johnson, Pooia Lalbakhsh, Terry Caelli, Guang Deng, David B. H. Tay, Shane Erickson, Philip Broadbridge, Amr El Refaie, Wendy Doube, Meg E. Morris
2016	J	`jnl`	Workload-Based Ordering of Multi-Dimensional Data. IEEE Trans. Knowl. Data Eng. Shengxun Yang, Zhen He, Yi-Ping Phoebe Chen
2015	J	`jnl`	Data mining in lung cancer pathologic staging diagnosis: Correlation between clinical and pathology information. Expert Syst. Appl. Hao-Fan Yang, Yi-Ping Phoebe Chen
2015	J	`jnl`	Editorial. Comput. Biol. Chem. Hsien-Da Huang, Yi-Ping Phoebe Chen
2015	J	`jnl`	Efficient Conversion of RNA Pseudoknots to Knot-Free Structures Using a Graphical Model. IEEE Trans. Biomed. Eng. Jimmy Ka Ho Chiu, Yi-Ping Phoebe Chen
2015	—	`conf`	Evaluation of Recent Computational Approaches in Short-Term Traffic Forecasting. IFIP AI Hao-Fan Yang, Tharam S. Dillon, Yi-Ping Phoebe Chen
2015	J	`jnl`	Guest Editorial for the 13th Asia Pacific Bioinformatics Conference. IEEE ACM Trans. Comput. Biol. Bioinform. Hsien-Da Huang, Yi-Ping Phoebe Chen
2015	J	`jnl`	Image based computer aided diagnosis system for cancer detection. Expert Syst. Appl. Howard Lee, Yi-Ping Phoebe Chen
2015	J	`jnl`	Pairwise RNA secondary structure alignment with conserved stem pattern. Bioinform. Jimmy Ka Ho Chiu, Yi-Ping Phoebe Chen
2014	J	`jnl`	Advances in bioinformatics: Selected papers from APBC 2014. Comput. Biol. Chem. Shuigeng Zhou, Yi-Ping Phoebe Chen
2014	J	`jnl`	Cell cycle phase detection with cell deformation analysis. Expert Syst. Appl. Howard Lee, Yi-Ping Phoebe Chen
2014	J	`jnl`	Cell morphology based classification for red cells in blood smear images. Pattern Recognit. Lett. Howard Lee, Yi-Ping Phoebe Chen
2014	J	`jnl`	Computational developments in microRNA-regulated protein-protein interactions. BMC Syst. Biol. Wei Zhu, Yi-Ping Phoebe Chen
2014	Misc	`conf`	Conjoint Mining of Data and Content with Applications in Business, Bio-medicine, Transport Logistics and Electrical Power Systems. AIAI Tharam S. Dillon, Yi-Ping Phoebe Chen, Elizabeth Chang, Mukesh K. Mohania
2014	J	`jnl`	Determining common insertion sites based on retroviral insertion distribution across tumors. Comput. Biol. Chem. Feng Chen, Zhoufang Li, Yi-Ping Phoebe Chen
2014	J	`jnl`	Guest editorial for the 12th Asia Pacific Bioinformatics Conference. IEEE ACM Trans. Comput. Biol. Bioinform. Shuigeng Zhou, Yi-Ping Phoebe Chen
2014	J	`jnl`	Model-based approach to spatial-temporal sampling of video clips for video object detection by classification. J. Vis. Commun. Image Represent. Chi-Han Chuang, Shyi-Chyi Cheng, Chin-Chun Chang, Yi-Ping Phoebe Chen
2014	J	`jnl`	Skin cancer extraction with optimum fuzzy thresholding technique. Appl. Intell. Howard Lee, Yi-Ping Phoebe Chen
2014	J	`jnl`	Subdividing globally important zones based on data distribution across multiple genome fragments. Comput. Biol. Medicine Feng Chen, Yuhong Zhang, Yi-Ping Phoebe Chen
2014	J	`jnl`	Using Dead Ants to improve the robustness and adaptability of AntNet routing algorithm. J. Netw. Comput. Appl. Pooia Lalbakhsh, Bahram Zaeri, Yi-Ping Phoebe Chen
2013	J	`jnl`	Association rule mining to detect factors which contribute to heart disease in males and females. Expert Syst. Appl. Jesmin Nahar, Tasadduq Imam, Kevin S. Tickle, Yi-Ping Phoebe Chen
2013	J	`jnl`	Computational intelligence for heart disease diagnosis: A medical knowledge driven approach. Expert Syst. Appl. Jesmin Nahar, Tasadduq Imam, Kevin S. Tickle, Yi-Ping Phoebe Chen
2013	J	`jnl`	Dynamically predicting protein functions from semantic associations of proteins. Netw. Model. Anal. Health Informatics Bioinform. Jingyu Hou, Wei Zhu, Yi-Ping Phoebe Chen
2013	J	`jnl`	GHT-based associative memory learning and its application to Human action detection and classification. Pattern Recognit. Shyi-Chyi Cheng, Kwang-Yu Cheng, Yi-Ping Phoebe Chen
2013	J	`jnl`	Guest Editorial: Advanced Algorithms of Bioinformatics. IEEE ACM Trans. Comput. Biol. Bioinform. Yi-Ping Phoebe Chen
2013	J	`jnl`	Ligand release mechanisms and channels in histone deacetylases. J. Comput. Chem. Subha Kalyaanamoorthy, Yi-Ping Phoebe Chen
2013	J	`jnl`	Prediction of pre-miRNA with multiple stem-loops using pruning algorithm. Comput. Biol. Medicine Xiaofeng Song, Minghao Wang, Yi-Ping Phoebe Chen, Huating Wang, Ping Han, Hao Sun
2013	J	`jnl`	S Comput. J. Thi Nguyen, Zhen He, Yi-Ping Phoebe Chen
2013	J	`jnl`	Semantically predicting protein functions based on protein functional connectivity. Comput. Biol. Chem. Wei Zhu, Jingyu Hou, Yi-Ping Phoebe Chen
2012	B	`conf`	A Scheduling Method for Node Relay-based Webcast Considering Reconnection. AINA Yusuke Gotoh, Tomoki Yoshihisa, Hideo Taniguchi, Masanori Kanazawa, J. Wenny Rahayu, Yi-Ping Phoebe Chen
2012	J	`jnl`	A scheduling method to reduce waiting time for close-range broadcasting. Mob. Inf. Syst. Yusuke Gotoh, Tomoki Yoshihisa, Hideo Taniguchi, Masanori Kanazawa, J. Wenny Rahayu, Yi-Ping Phoebe Chen
2012	J	`jnl`	Computational intelligence for microarray data and biomedical image analysis for the early diagnosis of breast cancer. Expert Syst. Appl. Jesmin Nahar, Tasadduq Imam, Kevin S. Tickle, A. B. M. Shawkat Ali, Yi-Ping Phoebe Chen
2012	J	`jnl`	Discovering Inhibition Pathways for Protein Kinases. IEEE Intell. Syst. Qingfeng Chen, Yi-Ping Phoebe Chen
2012	J	`jnl`	Exploring Inhibitor Release Pathways in Histone Deacetylases Using Random Acceleration Molecular Dynamics Simulations. J. Chem. Inf. Model. Subha Kalyaanamoorthy, Yi-Ping Phoebe Chen
2012	J	`jnl`	Guest Editorial: Application and Development of Bioinformatics. IEEE ACM Trans. Comput. Biol. Bioinform. Yi-Ping Phoebe Chen
2012	—	`conf`	MCJoin: a memory-constrained join for column-store main-memory databases. SIGMOD Conference Steven Keith Begley, Zhen He, Yi-Ping Phoebe Chen
2012	J	`jnl`	Predicting miRNA-mediated gene silencing mode based on miRNA-target duplex features. Comput. Biol. Medicine Xiaofeng Song, Lei Cheng, Tao Zhou, Xuejiang Guo, Xiaobai Zhang, Yi-Ping Phoebe Chen, Ping Han, Jiahao Sha
2012	Misc	`conf`	Reordering video shots for event classification using bag-of-words models and string kernels. IVCNZ Yung-Lun Chen, Shyi-Chyi Cheng, Yi-Ping Phoebe Chen
2012	J	`jnl`	The Tenth Asia Pacific Bioinformatics Conference (APBC 2012). BMC Genom. Yi-Ping Phoebe Chen, Peer Bork
2011	—	`conf`	A Scheduling Method for Selective Contents Broadcasting with Fast-Forwarding. 3PGCIC Yusuke Gotoh, Tomoki Yoshihisa, Hideo Taniguchi, Masanori Kanazawa, J. Wenny Rahayu, Yi-Ping Phoebe Chen
2011	C	`conf`	A method to reduce waiting time for close-range broadcasting. MoMM Yusuke Gotoh, Tomoki Yoshihisa, Hideo Taniguchi, Masanori Kanazawa, J. Wenny Rahayu, Yi-Ping Phoebe Chen
2011	J	`jnl`	Comparative study of computational methods to detect the correlated reaction sets in biochemical networks. Briefings Bioinform. Yanping Xi, Yi-Ping Phoebe Chen, Chen Qian, Fei Wang
2011	J	`jnl`	Development and application of a modified dynamic time warping algorithm (DTW-S) to analyses of primate brain expression time series. BMC Bioinform. Yuan Yuan, Yi-Ping Phoebe Chen, Shengyu Ni, Augix Guohua Xu, Lin Tang, Martin Vingron, Mehmet Somel, Philipp Khaitovich
2011	J	`jnl`	External Sorting on Flash Memory Via Natural Page Run Generation. Comput. J. Yang Liu, Zhen He, Yi-Ping Phoebe Chen, Thi Nguyen
2011	J	`jnl`	Function Annotation for Pseudoknot Using Structure Similarity. IEEE ACM Trans. Comput. Biol. Bioinform. Qingfeng Chen, Yi-Ping Phoebe Chen
2011	—	`conf`	Identifying multiple stem-loops pre-miRNA using support vector machine. BIBM Workshops Xiaofeng Song, Minghao Wang, Yi-Ping Phoebe Chen, Ping Han
2011	J	`jnl`	Modeling Conserved Structure Patterns for Functional Noncoding RNA. IEEE Trans. Biomed. Eng. Qingfeng Chen, Yi-Ping Phoebe Chen
2011	J	`jnl`	Ranking inter-relationships between clusters. Int. J. Syst. Sci. Tingting Wang, Feng Chen, Yi-Ping Phoebe Chen
2011	J	`jnl`	Significant Cancer Prevention Factor Extraction: An Association Rule Discovery Approach. J. Medical Syst. Jesmin Nahar, Kevin S. Tickle, A. B. M. Shawkat Ali, Yi-Ping Phoebe Chen
2010	B	`ed.`	Advances in Multimedia Modeling, 16th International Multimedia Modeling Conference, MMM 2010, Chongqing, China, January 6-8, 2010. Proceedings MMM Susanne Boll, Qi Tian, Lei Zhang, Zili Zhang, Yi-Ping Phoebe Chen
2010	J	`jnl`	Exploring Cross-Species-Related miRNAs Based on Sequence and Secondary Structure. IEEE Trans. Biomed. Eng. Feng Chen, Yi-Ping Phoebe Chen
2010	J	`jnl`	Exploring the ncRNA-ncRNA patterns based on bridging rules. J. Biomed. Informatics Feng Chen, Yi-Ping Phoebe Chen
2010	J	`jnl`	Guest Editors' Introduction. Int. J. Softw. Eng. Knowl. Eng. Zili Zhang, Yi-Ping Phoebe Chen
2010	J	`jnl`	Identifying Co-Regulating microRNA Groups. J. Bioinform. Comput. Biol. Jiyuan An, Kwok Pui Choi, Christine A. Wells, Yi-Ping Phoebe Chen
2010	J	`jnl`	Insights into Bacterial Genome Composition through Variable Target GC Content Profiling. J. Comput. Biol. Scott Mann, Jinyan Li, Yi-Ping Phoebe Chen
2010	J	`jnl`	Knowledge-Discounted Event Detection in Sports Video. IEEE Trans. Syst. Man Cybern. Part A Dian Tjondronegoro, Yi-Ping Phoebe Chen
2010	J	`jnl`	Mining characteristic relations bind to RNA secondary structures. IEEE Trans. Inf. Technol. Biomed. Qingfeng Chen, Yi-Ping Phoebe Chen
2010	J	`jnl`	Spectral shape descriptor using spherical harmonics. Integr. Comput. Aided Eng. Atul Sajjanhar, Guojun Lu, Dengsheng Zhang, Jingyu Hou, Wanlei Zhou, Yi-Ping Phoebe Chen
2010	—	`conf`	Third International Workshop on Conceptual Modelling for Life Sciences Applications (CMLSA 2010). ER Workshops Yi-Ping Phoebe Chen, Sven Hartmann, Jing Wang
2010	—	`conf`	microDoR for HUMAN: A web server to predict mode of miRNA-mediated gene silencing. BIBM Workshops Lei Cheng, Tao Zhou, Xuejiang Guo, Xiaofeng Song, Xiaobai Zhang, Ping Han, Yi-Ping Phoebe Chen, Jiahao Sha
2009	J	`jnl`	Acoustic feature selection for automatic emotion recognition from speech. Inf. Process. Manag. Jia Rong, Gang Li, Yi-Ping Phoebe Chen
2009	J	`jnl`	Analysis on relationship between extreme pathways and correlated reaction sets. BMC Bioinform. Yanping Xi, Yi-Ping Phoebe Chen, Ming Cao, Weirong Wang, Fei Wang
2009	J	`jnl`	Candidate working set strategy based SMO algorithm in support vector machine. Inf. Process. Manag. Xiaofeng Song, Weimin Chen, Yi-Ping Phoebe Chen, Bin Jiang
2009	—	`conf`	Data Pre-processing for More Effective Gene Clustering. CSO (1) Jingyu Hou, Yi-Ping Phoebe Chen
2009	J	`jnl`	Discovery of Structural and Functional Features in RNA Pseudoknots. IEEE Trans. Knowl. Data Eng. Qingfeng Chen, Yi-Ping Phoebe Chen
2009	B	`conf`	Early Breast Cancer Identification: Which Way to Go? Microarray or Image Based Computer Aided Diagnosis!. NSS Jesmin Nahar, Kevin S. Tickle, A. B. M. Shawkat Ali, Yi-Ping Phoebe Chen
2009	J	`jnl`	Finding rule groups to classify high dimensional gene expression datasets. Comput. Biol. Chem. Jiyuan An, Yi-Ping Phoebe Chen
2009	—	`conf`	High Functional Coherence in k-Partite Protein Cliques of Protein Interaction Networks. BIBM Qian Liu, Yi-Ping Phoebe Chen, Jinyan Li
2009	C	`conf`	Spherical Harmonics and Distance Transform for Image Representation and Retrieval. IDEAL Atul Sajjanhar, Guojun Lu, Dengsheng Zhang, Jingyu Hou, Yi-Ping Phoebe Chen
2008	J	`jnl`	A scalable and extensible segment-event-object-based sports video retrieval system. ACM Trans. Multim. Comput. Commun. Appl. Dian Tjondronegoro, Yi-Ping Phoebe Chen, Adrien Joly
2008	—	`ed.`	Advances in Conceptual Modeling - Challenges and Opportunities, ER 2008 Workshops CMLSA, ECDM, FP-UML, M2AS, RIGiM, SeCoGIS, WISM, Barcelona Spain, October 20-23, 2008. Proceedings ER Workshops Il-Yeol Song, Mario Piattini, Yi-Ping Phoebe Chen, Sven Hartmann, Fabio Grandi, Juan Trujillo, Andreas L. Opdahl, Fernando Ferri, Patrizia Grifoni, Maria Chiara Caschera, Colette Rolland, Carson Woo, Camille Salinesi, Esteban Zimányi, Christophe Claramunt, Flavius Frasincar, Geert-Jan Houben, Philippe Thiran
2008	C	`conf`	Image retrieval based on semantics of intra-region color properties. CIT Atul Sajjanhar, Guojun Lu, Dengsheng Zhang, Wanlei Zhou, Yi-Ping Phoebe Chen
2008	B	`conf`	Interacting Amino Acid Preferences of 3D Pattern Pairs at the Binding Sites of Transient and Obligate Protein Complexes. APBC Suryani Lukman, Kelvin Sim, Jinyan Li, Yi-Ping Phoebe Chen
2008	—	`conf`	Medical Knowledge Discovery from a Regional Asthma Dataset. ICIC (2) Sam Schmidt, Gang Li, Yi-Ping Phoebe Chen
2008	—	`conf`	Preface to CMLSA 2008. ER Workshops Yi-Ping Phoebe Chen, Sven Hartmann, Markus Kirchberg
2008	J	`jnl`	Rule-based dependency models for security protocol analysis. Integr. Comput. Aided Eng. Qingfeng Chen, Shichao Zhang, Yi-Ping Phoebe Chen
2007	J	`jnl`	A dimensionality reduction algorithm and its application for interactive visualization. J. Vis. Lang. Comput. Jiyuan An, Jeffrey Xu Yu, Chotirat Ann Ratanamahatana, Yi-Ping Phoebe Chen
2007	—	`conf`	Acoustic Features Extraction for Emotion Recognition. ACIS-ICIS Jia Rong, Yi-Ping Phoebe Chen, Morshed U. Chowdhury, Gang Li
2007	—	`ed.`	Advances in Conceptual Modeling - Foundations and Applications, ER 2007 Workshops CMLSA, FP-UML, ONISW, QoIS, RIGiM,SeCoGIS, Auckland, New Zealand, November 5-9, 2007, Proceedings ER Workshops Jean-Luc Hainaut, Elke A. Rundensteiner, Markus Kirchberg, Michela Bertolotto, Mathias Brochhausen, Yi-Ping Phoebe Chen, Samira Si-Said Cherfi, Martin Doerr, Hyoil Han, Sven Hartmann, Jeffrey Parsons, Geert Poels, Colette Rolland, Juan Trujillo, Eric S. K. Yu, Esteban Zimányi
2007	J	`jnl`	Detecting inconsistency in biological molecular databases using ontologies. Data Min. Knowl. Discov. Qingfeng Chen, Yi-Ping Phoebe Chen, Chengqi Zhang
2007	—	`conf`	Finding Motifs in miRNA Sequences. ACIS-ICIS Chinnu Subramaniam, Jiyuan An, Jayavardhana Gubbi, Yi-Ping Phoebe Chen
2007	C	`conf`	Identifying Dependency Between Secure Messages for Protocol Analysis. KSEM Qingfeng Chen, Shichao Zhang, Yi-Ping Phoebe Chen
2007	C	`conf`	Learning Dependency Model for AMP-Activated Protein Kinase Regulation. KSEM Yi-Ping Phoebe Chen, Qiumei Qin, Qingfeng Chen
2007	—	`conf`	Preface to CMLSA 2007. ER Workshops Yi-Ping Phoebe Chen, Sven Hartmann
2006	—	`conf`	A Similarity Search Algorithm to Predict Protein Structures. KES (2) Jiyuan An, Yi-Ping Phoebe Chen
2006	J	`jnl`	An evolutionary learning approach for adaptive negotiation agents. Int. J. Intell. Syst. Raymond Y. K. Lau, Maolin Tang, On Wong, Stephen Milliner, Yi-Ping Phoebe Chen
2006	B	`conf`	Analyzing Inconsistency Toward Enhancing Integration of Biological Molecular Databases. APBC Yi-Ping Phoebe Chen, Qingfeng Chen
2006	—	`conf`	Depth First Rule Generation for Text Categorization. AMT Jiyuan An, Yi-Ping Phoebe Chen
2006	C	`conf`	Detecting Collusion Attacks in Security Protocols. APWeb Qingfeng Chen, Yi-Ping Phoebe Chen, Shichao Zhang, Chengqi Zhang
2006	—	`conf`	Extensible detection and indexing of highlight events in broadcasted sports video. ACSC Dian Tjondronegoro, Yi-Ping Phoebe Chen, Binh Pham
2006	—	`conf`	Finding Rule Groups to Classify High Dimensional Gene Expression Datasets. ICPR (1) Jiyuan An, Yi-Ping Phoebe Chen
2006	—	`conf`	Finding Short Patterns to Classify Text Documents. Web Intelligence Jiyuan An, Yi-Ping Phoebe Chen
2006	J	`jnl`	Guest editors' introduction: multimedia modelling. Vis. Comput. Yi-Ping Phoebe Chen, Tat-Seng Chua
2006	J	`jnl`	MDSM: Microarray database schema matching using the Hungarian method. Inf. Sci. Yi-Ping Phoebe Chen, Supawan Prompramote, Frédéric Maire
2006	—	`conf`	Microarray Analysis for Gene Expression that involves Trace Metals. AMT Chinnu Subramaniam, Jiyuan An, Yi-Ping Phoebe Chen
2006	B	`conf`	Mining Frequent Itemsets for Protein Kinase Regulation. PRICAI Qingfeng Chen, Yi-Ping Phoebe Chen, Chengqi Zhang, Lianggang Li
2006	J	`jnl`	Mining frequent patterns for AMP-activated protein kinase regulation on skeletal muscle. BMC Bioinform. Qingfeng Chen, Yi-Ping Phoebe Chen
2006	B	`conf`	Preface. APBC Tao Jiang, Ueng-Cheng Yang, Yi-Ping Phoebe Chen, Limsoon Wong
2006	B	`ed.`	Proceedings of 4th Asia-Pacific Bioinformatics Conference. 13-16 February 2006, Taipei, Taiwan APBC Tao Jiang, Ueng-Cheng Yang, Yi-Ping Phoebe Chen, Limsoon Wong
2006	—	`conf`	Providing Real-Time Information Services for Public Bus Commuters. AMT David Morrison, Atul Sajjanhar, Yi-Ping Phoebe Chen
2006	B	`conf`	Towards universal and statistical-driven heuristics for automatic classification of sports video events. MMM Dian Tjondronegoro, Yi-Ping Phoebe Chen
2006	A	`conf`	Using Decision-Tree to Automatically Construct Learned-Heuristics for Events Classification in Sports Video. ICME Dian Tjondronegoro, Yi-Ping Phoebe Chen
2006	J	`jnl`	Using object and trajectory analysis to facilitate indexing and retrieval of video. Knowl. Based Syst. Carlos Lopez, Yi-Ping Phoebe Chen
2005	B	`ed.`	11th International Conference on Multi Media Modeling (MMM 2005), 12-14 January 2005, Melbourne, Australia MMM Yi-Ping Phoebe Chen
2005	—	`conf`	A Framework for Merging Inconsistent Beliefs in Security Protocol Analysis. DEEC Qingfeng Chen, Yi-Ping Phoebe Chen, Chengqi Zhang, Shichao Zhang
2005	B	`conf`	A New Indexing Method for High Dimensional Dataset. DASFAA Jiyuan An, Yi-Ping Phoebe Chen, Qinying Xu, Xiaofang Zhou
2005	—	`conf`	A Statistical-driven Approach for Automatic Classification of Events in AFL Video Highlights. ACSC Dian Tjondronegoro, Yi-Ping Phoebe Chen, Binh Pham
2005	—	`conf`	ANNODA: Tool for integrating Molecular-biological Annotation Data. ICDE Workshops Supawan Prompramote, Yi-Ping Phoebe Chen
2005	—	`conf`	Analyzing Security Protocols Using Association Rule Mining. Australian Conference on Artificial Intelligence Qingfeng Chen, Yi-Ping Phoebe Chen
2005	—	`conf`	Content exploration for e-learning using XML Web services. AMT Atul Sajjanhar, Jingyu Hou, Yi-Ping Phoebe Chen
2005	A*	`conf`	Content-based video indexing for sports applications using integrated multi-modal approach. ACM Multimedia Dian Tjondronegoro, Yi-Ping Phoebe Chen, Binh Pham
2005	J	`jnl`	DDR: an index method for large time-series datasets. Inf. Syst. Jiyuan An, Yi-Ping Phoebe Chen, Hanxiong Chen
2005	J	`jnl`	Guest Editor's Introduction: Advanced Techniques for Bioinformatics. J. Bioinform. Comput. Biol. Yi-Ping Phoebe Chen
2005	—	`conf`	Keyword extraction for text categorization. AMT Jiyuan An, Yi-Ping Phoebe Chen
2005	—	`conf`	Multi-level Semantic Analysis for Sports Video. KES (2) Dian Tjondronegoro, Yi-Ping Phoebe Chen
2005	B	`conf`	Preface. APBC Yi-Ping Phoebe Chen, Limsoon Wong
2005	B	`ed.`	Proceedings of 3rd Asia-Pacific Bioinformatics Conference, 17-21 January 2005, Singapore APBC Yi-Ping Phoebe Chen, Limsoon Wong
2005	—	`conf`	Side Chain Conformational Preferences in Protein Structures. METMBS Jiyuan An, Yi-Ping Phoebe Chen, Chinnu Subramaniam
2005	—	`conf`	Yet Another Induction Algorithm. KES (2) Jiyuan An, Yi-Ping Phoebe Chen
2004	B	`ed.`	10th International Multimedia Modeling Conference (MMM 2004), 5-7 January 2004, Brisbane, Australia MMM Yi-Ping Phoebe Chen
2004	C	`conf`	A Computational Framework for Nucleic Acid Sub-Sequence Identification. BIBE Scott Mann, Yi-Ping Phoebe Chen, Luke Eaton
2004	—	`conf`	A Grid-Based Index Method for Time Warping Distance. WAIM Jiyuan An, Yi-Ping Phoebe Chen, Eamonn J. Keogh
2004	—	`conf`	Automatic Pattern-Taxonomy Extraction for Web Mining. Web Intelligence Sheng-Tang Wu, Yuefeng Li, Yue Xu, Binh Pham, Yi-Ping Phoebe Chen
2004	A	`conf`	Classification of self-consumable highlights for soccer video summaries. ICME Dian Tjondronegoro, Yi-Ping Phoebe Chen, Binh Pham
2004	—	`conf`	Concept Learning of Text Documents. Web Intelligence Jiyuan An, Yi-Ping Phoebe Chen
2004	J	`jnl`	Integrating Highlights for More Complete Sports Video Summarization. IEEE Multim. Dian Tjondronegoro, Yi-Ping Phoebe Chen, Binh Pham
2004	J	`jnl`	Knowledge Creation in Export Trading. J. Inf. Knowl. Manag. Lisa Soon, Yi-Ping Phoebe Chen, Alan Underwood
2004	Misc	`conf`	Real-Time Gene-Expression Extraction with Fast Classification (FC) Networks. IC-AI Yan Chen, Yi-Ping Phoebe Chen, Jihan Zhu
2004	B	`ed.`	Second Asia-Pacific Bioinformatics Conference (APBC 2004), January 18-22, 2004, Dunedin, New Zealand APBC Yi-Ping Phoebe Chen
2004	C	`conf`	Surface Spatial Index Structure of High-Dimensional Space. IDEAL Jiyuan An, Yi-Ping Phoebe Chen, Qinying Xu
2004	—	`conf`	The power of play-break for automatic detection and browsing of self-consumable sport video highlights. Multimedia Information Retrieval Dian Tjondronegoro, Yi-Ping Phoebe Chen, Binh Pham
2003	—	`ch.`	A Hybrid Framework Using SOM and Fuzzy Theory for Textual Classification in Data Mining. Modelling with Words Yi-Ping Phoebe Chen
2003	J	`jnl`	Biomedical visualization. J. Vis. Lang. Comput. Yi-Ping Phoebe Chen
2003	J	`jnl`	Database Technologies for L-System Simulations in Virtual Plant Applications on Bioinformatics. Knowl. Inf. Syst. Yi-Ping Phoebe Chen, Robert M. Colomb
2003	B	`ed.`	First Asia-Pacific Bioinformatics Conference (APBC 2003), February 4-7, 2003, Adelaide, Australia APBC Yi-Ping Phoebe Chen
2003	J	`jnl`	Guest Editor'S Introduction. Int. J. Softw. Eng. Knowl. Eng. Yi-Ping Phoebe Chen
2003	—	`conf`	Sports video summarization using highlights and play-breaks. Multimedia Information Retrieval Dian Tjondronegoro, Yi-Ping Phoebe Chen, Binh Pham
2003	B	`conf`	XML-Based Multimedia Query System. MMM Yi-Ping Phoebe Chen
2002	—	`conf`	A Framework for Customizable Sports Video Management and Retrieval. MDM/KDD-PAKDD/KDMCD (Revised Papers) Dian Tjondronegoro, Yi-Ping Phoebe Chen, Binh Pham
2002	—	`conf`	Content-Based Video Data-Management: Key-Segment Extraction, MPEG-7 Summarisation, and XQUERY Retrieval. KDMCD Dian Tjondronegoro, Yi-Ping Phoebe Chen
2002	J	`jnl`	Content-based Indexing and Retrieval Using MPEG-7 and X-Query in Video Data Management Systems. World Wide Web Dian Tjondronegoro, Yi-Ping Phoebe Chen
2002	C	`conf`	Derivation of L-system Models from Measurements of Biological Branching Structures Using Genetic Algorithms. IEA/AIE Bian Runqiang, Yi-Ping Phoebe Chen, Kevin Burrage, Jim Hanan, Peter Room, John Belward
2002	—	`conf`	Modelling and Indexing Fuzzy Complex Shapes. VDB Jinglan Zhang, Binh Pham, Yi-Ping Phoebe Chen
2002	—	`conf`	Visualization of Web-based Australian Export Trading. VDB Lisa Soon, Yi-Ping Phoebe Chen
2001	B	`conf`	A New Approach to Hybrid SOM Implementations for Text Classification. FUZZ-IEEE Paul Gunther, Yi-Ping Phoebe Chen
2001	B	`conf`	Fuzzy Genetic Algorithms Based on Level Interval Algorithm. FUZZ-IEEE Jinglan Zhang, Binh Pham, Yi-Ping Phoebe Chen
2000	—	`—`	Generating database representations of L-systems in virtual plant applications Yi-Ping Phoebe Chen
2000	Misc	`conf`	Querying Recursive Structures without Recursive Queries. Australasian Database Conference Yi-Ping Phoebe Chen, Robert M. Colomb
1999	B	`conf`	DML: A Bridge between Database Systems and L-Systems for Biological Research. SSDBM Yi-Ping Phoebe Chen
1999	—	`conf`	Generic Process Solution in Database Systems and L-Systems for Bioinformatics Research. CODAS Yi-Ping Phoebe Chen, Robert M. Colomb
1997	—	`conf`	Use of Partial Functional Dependencies to Make Practical Approximate Translations Among Forms of Propositional Expert Systems. Australian Joint Conference on Artificial Intelligence Robert M. Colomb, Yi-Ping Phoebe Chen