Yasin Bakis

16 papers A* 3Journal 7Unranked 6
YearRankTypeTitle / Venue / Authors
2025 A* conf
Fish-Vista: A Multi-Purpose Dataset for Understanding & Identification of Traits from Images.
CVPR
Kazi Sajeed Mehrab, M. Maruf, Arka Daw, Abhilash Neog, Harish Babu Manogaran, Mridul Khurana, Zhenyang Feng, Bahadir Altintas, Yasin Bakis, Elizabeth G. Campolongo, Matthew J. Thompson, Xiaojun Wang, Hilmar Lapp, Tanya Y. Berger-Wolf, Paula M. Mabee, Henry L. Bart Jr., Wei-Lun Chao, Wasila M. Dahdul, Anuj Karpatne
2024 J jnl
Computational metadata generation methods for biological specimen image collections.
Int. J. Digit. Libr.
Kevin Karnani, Joel Pepper, Yasin Bakis, Xiaojun Wang, Henry L. Bart Jr., David E. Breen, Jane Greenberg
2024 J jnl
Fish-Vista: A Multi-Purpose Dataset for Understanding & Identification of Traits from Images.
CoRR
Kazi Sajeed Mehrab, M. Maruf, Arka Daw, Harish Babu Manogaran, Abhilash Neog, Mridul Khurana, Bahadir Altintas, Yasin Bakis, Elizabeth G. Campolongo, Matthew J. Thompson, Xiaojun Wang, Hilmar Lapp, Wei-Lun Chao, Paula M. Mabee, Henry L. Bart Jr., Wasila M. Dahdul, Anuj Karpatne
2024 — conf
Hierarchical Conditioning of Diffusion Models Using Tree-of-Life for Studying Species Evolution.
ECCV (89)
Mridul Khurana, Arka Daw, M. Maruf, Josef C. Uyeda, Wasila M. Dahdul, Caleb Charpentier, Yasin Bakis, Henry L. Bart Jr., Paula M. Mabee, Hilmar Lapp, James P. Balhoff, Wei-Lun Chao, Charles V. Stewart, Tanya Y. Berger-Wolf, Anuj Karpatne
2024 J jnl
Hierarchical Conditioning of Diffusion Models Using Tree-of-Life for Studying Species Evolution.
CoRR
Mridul Khurana, Arka Daw, M. Maruf, Josef C. Uyeda, Wasila M. Dahdul, Caleb Charpentier, Yasin Bakis, Henry L. Bart Jr., Paula M. Mabee, Hilmar Lapp, James P. Balhoff, Wei-Lun Chao, Charles V. Stewart, Tanya Y. Berger-Wolf, Anuj Karpatne
2024 A* conf
VLM4Bio: A Benchmark Dataset to Evaluate Pretrained Vision-Language Models for Trait Discovery from Biological Images.
NeurIPS
M. Maruf, Arka Daw, Kazi Sajeed Mehrab, Harish Babu Manogaran, Abhilash Neog, Medha Sawhney, Mridul Khurana, James P. Balhoff, Yasin Bakis, Bahadir Altintas, Matthew J. Thompson, Elizabeth G. Campolongo, Josef C. Uyeda, Hilmar Lapp, Henry L. Bart Jr., Paula M. Mabee, Yu Su, Wei-Lun Chao, Charles V. Stewart, Tanya Y. Berger-Wolf, Wasila M. Dahdul, Anuj Karpatne
2024 J jnl
VLM4Bio: A Benchmark Dataset to Evaluate Pretrained Vision-Language Models for Trait Discovery from Biological Images.
CoRR
M. Maruf, Arka Daw, Kazi Sajeed Mehrab, Harish Babu Manogaran, Abhilash Neog, Medha Sawhney, Mridul Khurana, James P. Balhoff, Yasin Bakis, Bahadir Altintas, Matthew J. Thompson, Elizabeth G. Campolongo, Josef C. Uyeda, Hilmar Lapp, Henry L. Bart Jr., Paula M. Mabee, Yu Su, Wei-Lun Chao, Charles V. Stewart, Tanya Y. Berger-Wolf, Wasila M. Dahdul, Anuj Karpatne
2023 A* conf
Discovering Novel Biological Traits From Images Using Phylogeny-Guided Neural Networks.
KDD
Mohannad Elhamod, Mridul Khurana, Harish Babu Manogaran, Josef C. Uyeda, Meghan A. Balk, Wasila M. Dahdul, Yasin Bakis, Henry L. Bart Jr., Paula M. Mabee, Hilmar Lapp, James P. Balhoff, Caleb Charpentier, David Carlyn, Wei-Lun Chao, Charles V. Stewart, Daniel I. Rubenstein, Tanya Y. Berger-Wolf, Anuj Karpatne
2023 J jnl
Discovering Novel Biological Traits From Images Using Phylogeny-Guided Neural Networks.
CoRR
Mohannad Elhamod, Mridul Khurana, Harish Babu Manogaran, Josef C. Uyeda, Meghan A. Balk, Wasila M. Dahdul, Yasin Bakis, Henry L. Bart Jr., Paula M. Mabee, Hilmar Lapp, James P. Balhoff, Caleb Charpentier, David Carlyn, Wei-Lun Chao, Charles V. Stewart, Daniel I. Rubenstein, Tanya Y. Berger-Wolf, Anuj Karpatne
2022 — conf
Toward a Flexible Metadata Pipeline for Fish Specimen Images.
MTSR
Dom Jebbia, Xiaojun Wang, Yasin Bakis, Henry L. Bart Jr., Jane Greenberg
2022 J jnl
Toward a Flexible Metadata Pipeline for Fish Specimen Images.
CoRR
Dom Jebbia, Xiaojun Wang, Yasin Bakis, Henry L. Bart Jr., Jane Greenberg
2021 — conf
Automatic Metadata Generation for Fish Specimen Image Collections.
JCDL
Joel Pepper, Jane Greenberg, Yasin Bakis, Xiaojun Wang, Henry L. Bart Jr., David E. Breen
2020 — conf
Biodiversity Image Quality Metadata Augments Convolutional Neural Network Classification of Fish Species.
MTSR
Jeremy Leipzig, Yasin Bakis, Xiaojun Wang, Mohannad Elhamod, Kelly Diamond, Wasila M. Dahdul, Anuj Karpatne, A. Murat Maga, Paula M. Mabee, Henry L. Bart Jr., Jane Greenberg
2013 J jnl
Testing robustness of relative complexity measure method constructing robust phylogenetic trees for Galanthus L. Using the relative complexity measure.
BMC Bioinform.
Yasin Bakis, Hasan H. Otu, Nivart Taçi, Cem Meydan, Nee Bilgin, Sirri Yüzbaiolu, Osman Ugur Sezerman
2009 — conf
An entropy based heuristic model for predicting functional sub-type divisions of protein families.
GECCO (Companion)
Deniz Yörükoglu, Yasin Bakis, Osman Ugur Sezerman
2009 — conf
Optimization of morphological data in numerical taxonomy analysis using genetic algorithms feature selection method.
GECCO (Companion)
Yasin Bakis, Osman Ugur Sezerman, M. Tekin Babaç, Cem Meydan