Yao-Zhong Zhang

24 papers B 1Journal 11Unranked 12
YearRankTypeTitle / Venue / Authors
2025 J jnl
PharaCon: a new framework for identifying bacteriophages via conditional representation learning.
Bioinform.
Zeheng Bai, Yao-Zhong Zhang, Yuxuan Pang, Seiya Imoto
2025 J jnl
STForte: tissue context-specific encoding and consistency-aware spatial imputation for spatially resolved transcriptomics.
Briefings Bioinform.
Yuxuan Pang, Chunxuan Wang, Yao-Zhong Zhang, Zhuo Wang, Seiya Imoto, Tzong-Yi Lee
2023 — conf
Identification of Victims Wearing Vibrant Clothing using MATLAB.
APSIPA ASC
Hao-Cheng Lu, Chiung-An Chen, Jia-Sheng Zhang, Yao-Zhong Zhang
2023 — conf
Imputing time-series microbiome abundance profiles with diffusion model.
BIBM
Misato Seki, Yao-Zhong Zhang, Seiya Imoto
2023 J jnl
Investigation of the BERT model on nucleotide sequences with non-standard pre-training and evaluation of different k-mer embeddings.
Bioinform.
Yao-Zhong Zhang, Zeheng Bai, Seiya Imoto
2023 — conf
The DSP and DDR4 VLSI Design for Multi-Sensor in Biomedical System.
APSIPA ASC
Jia-Sheng Zhang, Chiung-An Chen, Shih-Lun Chen, Yao-Zhong Zhang
2023 — conf
VLSI Design of Near-Lossless Image Compression using Improved LZW.
APSIPA ASC
Yao-Zhong Zhang, Chiung-An Chen, Jia-Sheng Zhang, Jia-Wen Wang
2023 J jnl
Zero-shot-capable identification of phage-host relationships with whole-genome sequence representation by contrastive learning.
Briefings Bioinform.
Yao-Zhong Zhang, Yunjie Liu, Zeheng Bai, Kosuke Fujimoto, Satoshi Uematsu, Seiya Imoto
2022 J jnl
Identification of bacteriophage genome sequences with representation learning.
Bioinform.
Zeheng Bai, Yao-Zhong Zhang, Satoru Miyano, Rui Yamaguchi, Kosuke Fujimoto, Satoshi Uematsu, Seiya Imoto
2021 J jnl
Enhancing breakpoint resolution with deep segmentation model: A general refinement method for read-depth based structural variant callers.
PLoS Comput. Biol.
Yao-Zhong Zhang, Seiya Imoto, Satoru Miyano, Rui Yamaguchi
2021 J jnl
HEAL: an automated deep learning framework for cancer histopathology image analysis.
Bioinform.
Yanan Wang, Nicolas Coudray, Yun Zhao, Fuyi Li, Changyuan Hu, Yao-Zhong Zhang, Seiya Imoto, Aristotelis Tsirigos, Geoffrey I. Webb, Roger J. Daly, Jiangning Song
2021 — conf
On the application of BERT models for nanopore methylation detection.
BIBM
Yao-Zhong Zhang, Kiyoshi Yamaguchi, Sera Hatakeyama, Yoichi Furukawa, Satoru Miyano, Rui Yamaguchi, Seiya Imoto
2020 — conf
Complex Task Assignment of Heterogeneous UAVs under Timing Constraints.
ICCA
Yao-Zhong Zhang, Jia-lin Xu, Zhuo-ran Wu, Yun-hong Ma
2020 J jnl
Nanopore basecalling from a perspective of instance segmentation.
BMC Bioinform.
Yao-Zhong Zhang, Arda Akdemir, Georg Tremmel, Seiya Imoto, Satoru Miyano, Tetsuo Shibuya, Rui Yamaguchi
2019 — conf
Cooperative reconnaissance mission planning for heterogeneous UAVs with DCSA.
ICCA
Yao-Zhong Zhang, He Li, Yun-hong Ma, Jian-Dong Zhang, Jian-liang He
2017 — conf
Reconstruction of high read-depth signals from low-depth whole genome sequencing data using deep learning.
BIBM
Yao-Zhong Zhang, Seiya Imoto, Satoru Miyano, Rui Yamaguchi
2013 J jnl
Multi-Step Regression Learning for Compositional Distributional Semantics
CoRR
Edward Grefenstette, Georgiana Dinu, Yao-Zhong Zhang, Mehrnoosh Sadrzadeh, Marco Baroni
2013 — conf
Multi-Step Regression Learning for Compositional Distributional Semantics.
IWCS
Edward Grefenstette, Georgiana Dinu, Yao-Zhong Zhang, Mehrnoosh Sadrzadeh, Marco Baroni
2013 J jnl
Probabilistic Chinese word segmentation with non-local information and stochastic training.
Inf. Process. Manag.
Xu Sun, Yao-Zhong Zhang, Takuya Matsuzaki, Yoshimasa Tsuruoka, Jun'ichi Tsujii
2012 J jnl
Structure-guided supertagger learning.
Nat. Lang. Eng.
Yao-Zhong Zhang, Takuya Matsuzaki, Jun'ichi Tsujii
2010 — conf
A Simple Approach for HPSG Supertagging Using Dependency Information.
HLT-NAACL
Yao-Zhong Zhang, Takuya Matsuzaki, Jun'ichi Tsujii
2010 B conf
Forest-guided Supertagger Training.
COLING
Yao-Zhong Zhang, Takuya Matsuzaki, Jun'ichi Tsujii
2009 — conf
A Discriminative Latent Variable Chinese Segmenter with Hybrid Word/Character Information.
HLT-NAACL
Xu Sun, Yao-Zhong Zhang, Takuya Matsuzaki, Yoshimasa Tsuruoka, Jun'ichi Tsujii
2009 — conf
HPSG Supertagging: A Sequence Labeling View.
IWPT
Yao-Zhong Zhang, Takuya Matsuzaki, Jun'ichi Tsujii