Yanjie Wei - RankMe

94 papers A 2B 6C 5Journal 49Unranked 29

Year	Rank	Type	Title / Venue / Authors
2026	—	`ed.`	Bioinformatics Research and Applications - 21st International Symposium, ISBRA 2025, Helsinki, Finland, August 3-5, 2025, Proceedings, Part I ISBRA (1) Jing Tang, Xin Lai, Zhipeng Cai, Wei Peng, Yanjie Wei
2026	—	`ed.`	Bioinformatics Research and Applications - 21st International Symposium, ISBRA 2025, Helsinki, Finland, August 3-5, 2025, Proceedings, Part II ISBRA (2) Jing Tang, Xin Lai, Zhipeng Cai, Wei Peng, Yanjie Wei
2026	J	`jnl`	From indoor to outdoor: Unsupervised domain adaptive gait recognition. Pattern Recognit. Likai Wang, Wei Feng, Ruize Han, Xiangqun Zhang, Yanjie Wei, Song Wang
2026	J	`jnl`	RabbitVar: Ultra-fast and accurate somatic small-variant calling on multi-core architectures. Future Gener. Comput. Syst. Hao Zhang, Lin Gan, Zekun Yin, Lifeng Yan, Honglei Song, Qixin Chang, Tong Zhang, Yanjie Wei, Beifang Niu, Bertil Schmidt, Weiguo Liu
2025	J	`jnl`	A Comparative Study of Sequence Clustering Algorithms. Big Data Min. Anal. Zhen Ju, Huiling Zhang, Jingjing Zhang, Wenhui Xi, Dian Huang, Shengzhong Feng, Jintao Meng, Yanjie Wei
2025	J	`jnl`	A New Benchmark and Algorithm for Clothes-Changing Video Person Re-Identification. IEEE Trans. Inf. Forensics Secur. Likai Wang, Xiangqun Zhang, Ruize Han, Yanjie Wei, Song Wang, Wei Feng
2025	J	`jnl`	Adaptive Jailbreaking Strategies Based on the Semantic Understanding Capabilities of Large Language Models. CoRR Mingyu Yu, Wei Wang, Yanjie Wei, Sujuan Qin
2025	—	`conf`	AlloPED: Leveraging Protein Language Models and Structure Features for Allosteric Site Prediction. ISBRA (2) Xiaochuan Chen, Jianqiang Zheng, Zhenni Huang, Ziqi Xu, Junye Huang, Yueyi Tan, Yanjie Wei, Huiling Zhang
2025	—	`conf`	An Efficient Parallel List Ranking Algorithm for Graph Concatenation on BSP Graph System. ISBRA (2) Maocheng Cao, Zhelang Deng, Qiucheng Miao, Jintao Meng, Yanjie Wei, Jiefeng Cheng
2025	J	`jnl`	Attention-Guided Residual U-Net with SE Connection and ASPP for Watershed-Based Cell Segmentation in Microscopy Images. J. Comput. Biol. Jovial Niyogisubizo, Keliang Zhao, Jintao Meng, Yi Pan, Didi Rosiyadi, Yanjie Wei
2025	J	`jnl`	CircRNA Profiles Analysis of Neuroblastoma for Identification of Drug Targets. IEEE Trans. Comput. Biol. Bioinform. Jingjing Zhang, Zhen Ju, Huiling Zhang, Haiping Zhang, Rui Zhou, Godfrey Chi-Fung Chan, Jintao Meng, Wenhui Xi, Yanjie Wei
2025	—	`conf`	FlexiCell: Deep Learning with Learnable Adaptive Filtering and Dual Attention for Cell Segmentation. BIBM Jovial Niyogisubizo, Keliang Zhao, Shengqi Zhou, Ruize Han, Jintao Meng, Wenhui Xi, Yanjie Wei
2025	—	`conf`	Learning the native-like codons with a 5'UTR and RNA secondary structure aided species-informed transformer model. BCB Qiuyue Hu, Rui Zhou, Zhihao Wang, Liangzhen Zheng, Yanjie Wei
2025	—	`conf`	MVmamba Deciphers Missense Variant Pathogenicity via Enhanced Bi-Mamba and Structure-Informed Protein Language Model. BIBM Huiling Zhang, Ganzhang Zheng, Ziqi Xu, Zhenni Huang, Zihan Zhou, Haiyan Wang, Yanjie Wei
2025	A	`conf`	NM-SpMM: Accelerating Matrix Multiplication Using N: M Sparsity with GPGPU. IPDPS Cong Ma, Du Wu, Zhelang Deng, Jiang Chen, Xiaowen Huang, Jintao Meng, Wenxi Zhu, Bingqiang Wang, Amelie Chi Zhou, Peng Chen, Minwen Deng, Yanjie Wei, Shengzhong Feng, Yi Pan
2025	J	`jnl`	NM-SpMM: Accelerating Matrix Multiplication Using N:M Sparsity with GPGPU. CoRR Cong Ma, Du Wu, Zhelang Deng, Jiang Chen, Xiaowen Huang, Jintao Meng, Wenxi Zhu, Bingqiang Wang, Amelie Chi Zhou, Peng Chen, Minwen Deng, Yanjie Wei, Shengzhong Feng, Yi Pan
2025	—	`conf`	ParaCoder: Parallel Code Generation with Large Language Model. FCPC@PPOPP Xiaowen Huang, Xu Zhang, Lvfang Tao, Renjie Mao, Nan Zhou, Wenxi Zhu, Minwen Deng, Jintao Meng, Yanjie Wei, Amelie Chi Zhou, Bingqiang Wang, Shengzhong Feng
2025	—	`conf`	Task-Adaptive Refined Reinforcement Learning with Granular Reward Shaping for Biomedical Information Extraction. BIBM Qiucheng Miao, Rui Zhou, Jintao Meng, Yanjie Wei
2025	J	`jnl`	zERExtractor:An Automated Platform for Enzyme-Catalyzed Reaction Data Extraction from Scientific Literature. CoRR Rui Zhou, Haohui Ma, Tianle Xin, Lixin Zou, Qiuyue Hu, Hongxi Cheng, Mingzhi Lin, Jingjing Guo, Sheng Wang, Guoqing Zhang, Yanjie Wei, Liangzhen Zheng
2024	J	`jnl`	A new paradigm for applying deep learning to protein-ligand interaction prediction. Briefings Bioinform. Zechen Wang, Sheng Wang, Yangyang Li, Jingjing Guo, Yanjie Wei, Yuguang Mu, Liangzhen Zheng, Weifeng Li
2024	—	`conf`	An In-Depth Assessment of Sequence Clustering Software in Bioinformatics. ISBRA (1) Zhen Ju, Mingyu Wang, Xuelei Li, Jintao Meng, Wenhui Xi, Yanjie Wei
2024	J	`jnl`	Autism Spectrum Disorder Classification with Interpretability in Children Based on Structural MRI Features Extracted Using Contrastive Variational Autoencoder. Big Data Min. Anal. Ruimin Ma, Ruitao Xie, Yanlin Wang, Jintao Meng, Yanjie Wei, Yunpeng Cai, Wenhui Xi, Yi Pan
2024	—	`conf`	CCVAN: A Conditional Molecular Generation Model based on conditional VAE and Wasserstein GAN. BCB Jianqiang Zheng, Ziqi Xu, Junwen Huang, Xiaochuan Chen, Yuetong Li, Yanjie Wei, Huiling Zhang
2024	—	`conf`	Deep Learning for Autism Spectrum Disorder Identification Based on Children's Facial Images: A Multi-Feature Fusion Perspective. BCB Wondimagegn Bekele Munto, Mengying Zhou, Yi Pan, Yanjie Wei, Wenhui Xi
2024	J	`jnl`	Distributed Heterogeneous Spiking Neural Network Simulator Using Sunway Accelerators. Big Data Min. Anal. Xuelei Li, Zhichao Wang, Yi Pan, Jintao Meng, Shengzhong Feng, Yanjie Wei
2024	J	`jnl`	Dual-View Pyramid Pooling in Deep Neural Networks for Improved Medical Image Classification and Confidence Calibration. CoRR Xiaoqing Zhang, Qiushi Nie, Zunjie Xiao, Jilu Zhao, Xiao Wu, Pengxin Guo, Runzhi Li, Jin Liu, Yanjie Wei, Yi Pan
2024	J	`jnl`	Editorial: Special Section on Challenges and Opportunities in Biomedical Big Data Analysis: From Large Language Models to Clinical Applications. Big Data Min. Anal. Yanjie Wei, Huiling Zhang, Zhipeng Cai, Fa Zhang, Zhaolei Zhang
2024	J	`jnl`	Fully Flexible Molecular Alignment Enables Accurate Ligand Structure Modeling. J. Chem. Inf. Model. Zhihao Wang, Fan Zhou, Zechen Wang, Qiuyue Hu, Yong-Qiang Li, Sheng Wang, Yanjie Wei, Liangzhen Zheng, Weifeng Li, Xiangda Peng
2024	—	`conf`	Meta-data Study in Autism Spectrum Disorder Classification Based on Structural MRI. BCB Ruimin Ma, Ying Huang, Yi Pan, Yanlin Wang, Yanjie Wei
2024	—	`conf`	Missense Mutation Effect Prediction using Categorical Boosting Optimized with Sparrow Search Algorithm. BCB Huiling Zhang, Jingjing Zhang, Ganzhang Zheng, Xiaochuan Chen, Zaoqing Liang, Haiyan Wang, Yanjie Wei
2024	J	`jnl`	OpenDock: a pytorch-based open-source framework for protein-ligand docking and modelling. Bioinform. Qiuyue Hu, Zechen Wang, Jintao Meng, Weifeng Li, Jingjing Guo, Yuguang Mu, Sheng Wang, Liangzhen Zheng, Yanjie Wei
2024	—	`conf`	PmmNDD: Predicting the Pathogenicity of Missense Mutations in Neurodegenerative Diseases via Ensemble Learning. ISBRA (3) Xijian Li, Ying Huang, Runxuan Tang, Guangcheng Xiao, Xiaochuan Chen, Ruilin He, Zhaolei Zhang, Jiana Luo, Yanjie Wei, Yijun Mao, Huiling Zhang
2024	J	`jnl`	SeedHit: A GPU Friendly Pre-Align Filtering Algorithm. IEEE ACM Trans. Comput. Biol. Bioinform. Zhen Ju, Jingjing Zhang, Xuelei Li, Jintao Meng, Yanjie Wei
2024	—	`conf`	The Algorithms of Predicting DNA Binding Site with Combined Feature Encoding and Optimum Decision. BCB Zhendong Liu, Jun Liu, Dongqing Wei, Yanjie Wei, Rongjun Man
2024	A	`conf`	autoGEMM: Pushing the Limits of Irregular Matrix Multiplication on Arm Architectures. SC Du Wu, Jintao Meng, Wenxi Zhu, Minwen Deng, Xiao Wang, Tao Luo, Mohamed Wahib, Yanjie Wei
2023	—	`conf`	A Novel Deep Learning Approach Featuring Graph-Based Algorithm for Cell Segmentation and Tracking. BIBM Keliang Zhao, Jovial Niyogisubizo, Linxia Xiao, Yi Pan, Dongqing Wei, Didi Rosiyadi, Yanjie Wei
2023	J	`jnl`	A fully differentiable ligand pose optimization framework guided by deep learning and a traditional scoring function. Briefings Bioinform. Zechen Wang, Liangzhen Zheng, Sheng Wang, Mingzhi Lin, Zhihao Wang, Adams Wai-Kin Kong, Yuguang Mu, Yanjie Wei, Weifeng Li
2023	J	`jnl`	Application of variational graph encoders as an effective generalist algorithm in computer-aided drug design. Nat. Mac. Intell. Hilbert Yuen In Lam, Robbe Pincket, Hao Han, Xing Er Ong, Zechen Wang, Jamie Hinks, Yanjie Wei, Weifeng Li, Liangzhen Zheng, Yuguang Mu
2023	J	`jnl`	Autism Spectrum Disorder Classification in Children based on Structural MRI Features Extracted using Contrastive Variational Autoencoder. CoRR Ruimin Ma, Ruitao Xie, Yanlin Wang, Jintao Meng, Yanjie Wei, Wenhui Xi, Yi Pan
2023	—	`conf`	Complex Time Series Analysis Based on Conditional Random Fields. ICPCSEE (1) Yanjie Wei, Haifeng Guo, Donghua Yang, Mengmeng Li, Bo Zheng, Hongzhi Wang
2023	J	`jnl`	Deep Learning-Based Bioactive Therapeutic Peptide Generation and Screening. J. Chem. Inf. Model. Haiping Zhang, Konda Mani Saravanan, Yanjie Wei, Yang Jiao, Yang Yang, Yi Pan, Xuli Wu, John Z. H. Zhang
2023	J	`jnl`	Guest Editors' Introduction to the Special Section on Bioinformatics Research and Applications. IEEE ACM Trans. Comput. Biol. Bioinform. Zhipeng Cai, Min Li, Pavel Skums, Yanjie Wei
2023	—	`conf`	Identification and Functional Annotation of circRNAs in Neuroblastoma Based on Bioinformatics. ISBRA Jingjing Zhang, Md. Tofazzal Hossain, Zhen Ju, Wenhui Xi, Yanjie Wei
2023	J	`jnl`	JCcirc: circRNA full-length sequence assembly through integrated junction contigs. Briefings Bioinform. Jingjing Zhang, Huiling Zhang, Zhen Ju, Yin Peng, Yi Pan, Wenhui Xi, Yanjie Wei
2023	—	`conf`	PCPI: Prediction of circRNA and Protein Interaction Using Machine Learning Method. ISBRA Md. Tofazzal Hossain, Md. Selim Reza, Xuelei Li, Yin Peng, Shengzhong Feng, Yanjie Wei
2023	J	`jnl`	RabbitFX: Efficient Framework for FASTA/Q File Parsing on Modern Multi-Core Platforms. IEEE ACM Trans. Comput. Biol. Bioinform. Hao Zhang, Honglei Song, Xiaoming Xu, Qixin Chang, Mingkai Wang, Yanjie Wei, Zekun Yin, Bertil Schmidt, Weiguo Liu
2023	J	`jnl`	SWsnn: A Novel Simulator for Spiking Neural Networks. J. Comput. Biol. Zhichao Wang, Xuelei Li, Jianping Fan, Jintao Meng, Zhenli Lin, Yi Pan, Yanjie Wei
2022	J	`jnl`	Automatic Generation of High-Performance Convolution Kernels on ARM CPUs for Deep Learning. IEEE Trans. Parallel Distributed Syst. Jintao Meng, Chen Zhuang, Peng Chen, Mohamed Wahib, Bertil Schmidt, Xiao Wang, Haidong Lan, Dou Wu, Minwen Deng, Yanjie Wei, Shengzhong Feng
2022	J	`jnl`	COVID19db: a comprehensive database platform to discover potential drugs and targets of COVID-19 at whole transcriptomic scale. Nucleic Acids Res. Wenliang Zhang, Yan Zhang, Zhuochao Min, Jing Mo, Zhen Ju, Wen Guan, Binghui Zeng, Yang Liu, Jianliang Chen, Qianshen Zhang, Hanguang Li, Chunxia Zeng, Yanjie Wei, Godfrey Chi-Fung Chan
2022	J	`jnl`	Generating and screening Briefings Bioinform. Haiping Zhang, Konda Mani Saravanan, Yang Yang, Yanjie Wei, Yi Pan, John Z. H. Zhang
2022	J	`jnl`	Identification of Autism spectrum disorder based on a novel feature selection method and Variational Autoencoder. Comput. Biol. Medicine Fangyu Zhang, Yanjie Wei, Jin Liu, Yanlin Wang, Wenhui Xi, Yi Pan
2022	J	`jnl`	Identification of Autism spectrum disorder based on a novel feature selection method and Variational Autoencoder. CoRR Fangyu Zhang, Yanjie Wei, Jin Liu, Yanlin Wang, Wenhui Xi, Yi Pan
2022	J	`jnl`	Improving protein-ligand docking and screening accuracies by incorporating a scoring function correction term. Briefings Bioinform. Liangzhen Zheng, Jintao Meng, Kai Jiang, Haidong Lan, Zechen Wang, Mingzhi Lin, Weifeng Li, Hongwei Guo, Yanjie Wei, Yuguang Mu
2022	J	`jnl`	Meta-data Study in Autism Spectrum Disorder Classification Based on Structural MRI. CoRR Ruimin Ma, Yanlin Wang, Yanjie Wei, Yi Pan
2022	—	`conf`	RabbitQCPlus: More Efficient Quality Control for Sequencing Data. BIBM Lifeng Yan, Zekun Yin, Hao Zhang, Zhan Zhao, Mingkai Wang, André Müller, Robin Kobus, Yanjie Wei, Beifang Niu, Bertil Schmidt, Weiguo Liu
2022	J	`jnl`	RabbitV: fast detection of viruses and microorganisms in sequencing data on multi-core architectures. Bioinform. Hao Zhang, Qixin Chang, Zekun Yin, Xiaoming Xu, Yanjie Wei, Bertil Schmidt, Weiguo Liu
2022	—	`conf`	Simulating Spiking Neural Networks Based on SW26010pro. ISBRA Zhichao Wang, Xuelei Li, Jintao Meng, Yi Pan, Yanjie Wei
2022	J	`jnl`	circMine: a comprehensive database to integrate, analyze and visualize human disease-related circRNA transcriptome. Nucleic Acids Res. Wenliang Zhang, Yang Liu, Zhuochao Min, Guodong Liang, Jing Mo, Zhen Ju, Binghui Zeng, Wen Guan, Yan Zhang, Jianliang Chen, Qianshen Zhang, Hanguang Li, Chunxia Zeng, Yanjie Wei, Godfrey Chi-Fung Chan
2022	J	`jnl`	nGIA: A novel Greedy Incremental Alignment based algorithm for gene sequence clustering. Future Gener. Comput. Syst. Zhen Ju, Huiling Zhang, Jintao Meng, Jingjing Zhang, Jianping Fan, Yi Pan, Weiguo Liu, Xuelei Li, Yanjie Wei
2021	—	`conf`	A novel virtual drug screening pipeline with deep-leaning as core component identifies inhibitor of pancreatic alpha-amylase. BIBM Haiping Zhang, Tingting Zhang, Konda Mani Saravanan, Linbu Liao, Hao Wu, Haishan Zhang, Huiling Zhang, Yi Pan, Xuli Wu, Yanjie Wei
2021	—	`conf`	An Efficient Greedy Incremental Sequence Clustering Algorithm. ISBRA Zhen Ju, Huiling Zhang, Jingtao Meng, Jingjing Zhang, Xuelei Li, Jianping Fan, Yi Pan, Weiguo Liu, Yanjie Wei
2021	—	`ed.`	Bioinformatics Research and Applications - 17th International Symposium, ISBRA 2021, Shenzhen, China, November 26-28, 2021, Proceedings ISBRA Yanjie Wei, Min Li, Pavel Skums, Zhipeng Cai
2021	J	`jnl`	Evaluation of residue-residue contact prediction methods: From retrospective to prospective. PLoS Comput. Biol. Huiling Zhang, Zhendong Bei, Wenhui Xi, Min Hao, Zhen Ju, Konda Mani Saravanan, Haiping Zhang, Ning Guo, Yanjie Wei
2021	J	`jnl`	RabbitMash: accelerating hash-based genome analysis on modern multi-core architectures. Bioinform. Zekun Yin, Xiaoming Xu, Jinxiao Zhang, Yanjie Wei, Bertil Schmidt, Weiguo Liu
2021	J	`jnl`	RabbitQC: high-speed scalable quality control for sequencing data. Bioinform. Zekun Yin, Hao Zhang, Meiyang Liu, Wen Zhang, Honglei Song, Haidong Lan, Yanjie Wei, Beifang Niu, Bertil Schmidt, Weiguo Liu
2021	—	`conf`	The Classification System and Biomarkers for Autism Spectrum Disorder: A Machine Learning Approach. ISBRA Zhongyang Dai, Haishan Zhang, Feifei Lin, Shengzhong Feng, Yanjie Wei, Jiaxiu Zhou
2020	J	`jnl`	A novel virtual screening procedure identifies Pralatrexate as inhibitor of SARS-CoV-2 RdRp and it reduces viral replication in vitro. PLoS Comput. Biol. Haiping Zhang, Yang Yang, Junxin Li, Min Wang, Konda Mani Saravanan, Jinli Wei, Justin Tze-Yang Ng, Md. Tofazzal Hossain, Maoxuan Liu, Huiling Zhang, Xiaohu Ren, Yi Pan, Yin Peng, Yi Shi, Xiaochun Wan, Yingxia Liu, Yanjie Wei
2020	J	`jnl`	An Infrared Defect Sizing Method Based on Enhanced Phase Images. Sensors Yanjie Wei, Zhilong Su, Shuangshuang Mao, Dongsheng Zhang
2020	C	`conf`	Protein Interresidue Contact Prediction Based on Deep Learning and Massive Features from Multi-sequence Alignment. PDCAT Huiling Zhang, Hao Wu, Hing-Fung Ting, Yanjie Wei
2019	J	`jnl`	A novel machine learning based approach for iPS progenitor cell identification. PLoS Comput. Biol. Haishan Zhang, Ximing Shao, Yin Peng, Yanning Teng, Konda Mani Saravanan, Huiling Zhang, Hongchang Li, Yanjie Wei
2019	—	`conf`	An Auto Code Generator for Stencil on SW26010. HPCC/SmartCity/DSS Xiaomin Zhu, Yunhui Zeng, Yanjie Wei, Shengzhong Feng, Weiguo Liu, Pavan Balaji
2019	J	`jnl`	Autoregressive-Model-Based Methods for Online Time Series Prediction with Missing Values: an Experimental Evaluation. CoRR Xi Chen, Hongzhi Wang, Yanjie Wei, Jianzhong Li, Hong Gao
2019	C	`conf`	Efficient Gene Assembly and Identification for Many Genome Samples. ICCC Zhichun Zheng, Ning Guo, Konda Mani Saravanan, Yanjie Wei
2019	—	`conf`	Efficient Parallel Sort on AVX-512-Based Multi-Core and Many-Core Architectures. HPCC/SmartCity/DSS Zekun Yin, Tianyu Zhang, André Müller, Hui Liu, Yanjie Wei, Bertil Schmidt, Weiguo Liu
2018	—	`conf`	Ensemble Learning Based Gender Recognition from Physiological Signals. BigData Congress Huiling Zhang, Ning Guo, Guangyuan Liu, Junhao Hu, Jiaxiu Zhou, Shengzhong Feng, Yanjie Wei
2018	—	`conf`	K-mer Counting for Genomic Big Data. BigData Congress Jianqiu Ge, Ning Guo, Jintao Meng, Bingqiang Wang, Pavan Balaji, Shengzhong Feng, Jiaxiu Zhou, Yanjie Wei
2018	J	`jnl`	Lock Contention Management in Multithreaded MPI. ACM Trans. Parallel Comput. Abdelhalim Amer, Huiwei Lu, Pavan Balaji, Milind Chabbi, Yanjie Wei, Jeff R. Hammond, Satoshi Matsuoka
2018	B	`conf`	SPECTR: Scalable Parallel Short Read Error Correction on Multi-core and Many-core Architectures. ICPP Kai Xu, Robin Kobus, Yuandong Chan, Ping Gao, Xiangxu Meng, Yanjie Wei, Bertil Schmidt, Weiguo Liu
2017	—	`conf`	Any-Time Methods for Time-Series Prediction with Missing Observations. BigData Congress Yanjie Wei, Hongzhi Wang, Shengfei Shi, Hong Gao, Jianzhong Li
2017	B	`conf`	Bloomfish: A Highly Scalable Distributed K-mer Counting Framework. ICPADS Tao Gao, Yanfei Guo, Yanjie Wei, Bingqiang Wang, Yutong Lu, Pietro Cicotti, Pavan Balaji, Michela Taufer
2017	B	`conf`	Scalable Assembly for Massive Genomic Graphs. CCGrid Jintao Meng, Ning Guo, Jianqiu Ge, Yanjie Wei, Pavan Balaji, Bingqiang Wang
2016	J	`jnl`	A hybrid method for splice site prediction based on Markov model and codon information. Int. J. Data Min. Bioinform. Dan Wei, Yin Peng, Yanjie Wei, Qingshan Jiang, Jinglong Fang
2016	B	`conf`	SWAP-Assembler 2: Optimization of De Novo Genome Assembler at Extreme Scale. ICPP Jintao Meng, Sangmin Seo, Pavan Balaji, Yanjie Wei, Bingqiang Wang, Shengzhong Feng
2015	B	`conf`	MPI+Threads: runtime contention and remedies. PPoPP Abdelhalim Amer, Huiwei Lu, Yanjie Wei, Pavan Balaji, Satoshi Matsuoka
2015	J	`jnl`	Personalized clinical data screening: Special issue on health informatics. Comput. Biol. Medicine Miaomiao Zhao, Yunpeng Cai, Jiankui He, Guanyu Wang, Dongqing Wei, Yanjie Wei, Caiwan Zhang, Fengfeng Zhou
2015	B	`conf`	SWAP-Assembler 2: Scalable Genome Assembler towards Millions of Cores - Practice and Experience. CCGRID Jintao Meng, Yanjie Wei, Sangmin Seo, Pavan Balaji
2014	—	`conf`	Modeling and analysis of gene regulatory networks with a Bayesian-driven approach. ISCIT Shuqiang Wang, Jinxing Hu, Yanyan Shen, Ling Yin, Yanjie Wei
2014	J	`jnl`	SWAP-Assembler: scalable and efficient genome assembly towards thousands of cores. BMC Bioinform. Jintao Meng, Bingqiang Wang, Yanjie Wei, Shengzhong Feng, Pavan Balaji
2013	J	`jnl`	An Energy Efficient Clustering Scheme for Data Aggregation in Wireless Sensor Networks. J. Comput. Sci. Technol. Jintao Meng, Jian-Rui Yuan, Shengzhong Feng, Yanjie Wei
2012	C	`conf`	A New Classification Method for Human Gene Splice Site Prediction. HIS Dan Wei, Weiwei Zhuang, Qingshan Jiang, Yanjie Wei
2012	J	`jnl`	A novel hierarchical clustering algorithm for gene sequences. BMC Bioinform. Dan Wei, Qingshan Jiang, Yanjie Wei, Shengrui Wang
2012	C	`conf`	DGraph: Algorithms for Shortgun Reads Assembly Using De Bruijn Graph. NPC Jintao Meng, Jianrui Yuan, Jiefeng Cheng, Yanjie Wei, Shengzhong Feng
2012	C	`conf`	Small World Asynchronous Parallel Model for Genome Assembly. NPC Jintao Meng, Jianrui Yuan, Jiefeng Cheng, Yanjie Wei, Shengzhong Feng
2007	J	`jnl`	Systematic study of the boundary composition in Poisson Boltzmann calculations. J. Comput. Chem. Parimal Kar, Yanjie Wei, Ulrich H. E. Hansmann, Siegfried Höfinger