Xubo Tang

11 papers Journal 11
YearRankTypeTitle / Venue / Authors
2025 J jnl
GOPhage: protein function annotation for bacteriophages by integrating the genomic context.
Briefings Bioinform.
Jiaojiao Guan, Yongxin Ji, Cheng Peng, Wei Zou, Xubo Tang, Jiayu Shang, Yanni Sun
2024 J jnl
Accurate and efficient protein embedding using multi-teacher distillation learning.
Bioinform.
Jiayu Shang, Cheng Peng, Yongxin Ji, Jiaojiao Guan, Dehan Cai, Xubo Tang, Yanni Sun
2024 J jnl
PhaGO: Protein function annotation for bacteriophages by integrating the genomic context.
CoRR
Jiaojiao Guan, Yongxin Ji, Cheng Peng, Wei Zou, Xubo Tang, Jiayu Shang, Yanni Sun
2023 J jnl
HOTSPOT: hierarchical host prediction for assembled plasmid contigs with transformer.
Bioinform.
Yongxin Ji, Jiayu Shang, Xubo Tang, Yanni Sun
2023 J jnl
PhaGenus: genus-level classification of bacteriophages using a Transformer model.
Briefings Bioinform.
Jiaojiao Guan, Cheng Peng, Jiayu Shang, Xubo Tang, Yanni Sun
2023 J jnl
PhaTYP: predicting the lifestyle for bacteriophages using BERT.
Briefings Bioinform.
Jiayu Shang, Xubo Tang, Yanni Sun
2023 J jnl
PhaVIP: Phage VIrion Protein classification based on chaos game representation and Vision Transformer.
Bioinform.
Jiayu Shang, Cheng Peng, Xubo Tang, Yanni Sun
2023 J jnl
VirBot: an RNA viral contig detector for metagenomic data.
Bioinform.
Guowei Chen, Xubo Tang, Mang Shi, Yanni Sun
2022 J jnl
Accurate identification of bacteriophages from metagenomic data using Transformer.
Briefings Bioinform.
Jiayu Shang, Xubo Tang, Ruocheng Guo, Yanni Sun
2022 J jnl
RdRp-based sensitive taxonomic classification of RNA viruses for metagenomic data.
Briefings Bioinform.
Xubo Tang, Jiayu Shang, Yanni Sun
2019 J jnl
Fast and accurate microRNA search using CNN.
BMC Bioinform.
Xubo Tang, Yanni Sun