Xinxia Peng - RankMe

11 papers A 1C 1Journal 6Unranked 3

Year	Rank	Type	Title / Venue / Authors
2025	—	`conf`	Exploratory Analysis of the Regulation of Long Non-Coding RNA Transcription with Nucleotide Large Language Models. BIBM Wei Wang, Zhichao Hou, Tianfu Wu, Xiaorui Liu, Xinxia Peng
2024	J	`jnl`	Exploring the Potentials and Challenges of Using Large Language Models for the Analysis of Transcriptional Regulation of Long Non-coding RNAs. CoRR Wei Wang, Zhichao Hou, Xiaorui Liu, Xinxia Peng
2021	—	`conf`	Feature selection using co-occurrence correlation improves cell clustering and embedding in single cell RNAseq data. BIBM Evan S. Walsh, H. Troy Ghashghaei, Xinxia Peng
2019	—	`conf`	Computational identification of extra coding RNAs related to HIV-1 infection. BIBM Ian Huntress, Erin Harrell, Hayden Brochu, Xinxia Peng
2015	J	`jnl`	Tissue-specific transcriptome sequencing analysis expands the non-human primate reference transcriptome resource (NHPRTR). Nucleic Acids Res. Xinxia Peng, Jean Thierry-Mieg, Danielle Thierry-Mieg, Andrew Nishida, Lenore Pipes, Marjan Bozinoski, Matthew J. Thomas, Sara Kelly, Jeffrey M. Weiss, Muthuswamy Raveendran, Donna M. Muzny, Richard A. Gibbs, Jeffrey Rogers, Gary P. Schroth, Michael G. Katze, Christopher E. Mason
2013	J	`jnl`	The non-human primate reference transcriptome resource (NHPRTR) for comparative functional genomics. Nucleic Acids Res. Lenore Pipes, Sheng Li, Marjan Bozinoski, Robert Palermo, Xinxia Peng, Philip D. Blood, Sara Kelly, Jeffrey M. Weiss, Jean Thierry-Mieg, Danielle Thierry-Mieg, Paul Zumbo, Ronghua Chen, Gary P. Schroth, Christopher E. Mason, Michael G. Katze
2012	J	`jnl`	A new approach to bias correction in RNA-Seq. Bioinform. Daniel C. Jones, Walter L. Ruzzo, Xinxia Peng, Michael G. Katze
2012	J	`jnl`	Compression of next-generation sequencing reads aided by highly efficient de novo assembly CoRR Daniel C. Jones, Walter L. Ruzzo, Xinxia Peng, Michael G. Katze
2008	A	`conf`	Assessment and improvement of the ISMB Ashley Vaughan, Sum-Ying Chiu, Gowthaman Ramasamy, Ling Li, Malcolm J. Gardner, Alice S. Tarun, Stefan H. I. Kappe, Xinxia Peng
2006	C	`conf`	Computational Analysis of Mass Spectrometry Data Using Novel Combinatorial Methods. AICCSA Ahmed Fadiel, Michael A. Langston, Xinxia Peng, Andy D. Perkins, Hugh S. Taylor, Ozge Tuncalp, D. Vitello, Paul H. Pevsner, Frederick Naftolin
2005	J	`jnl`	GeneKeyDB: A lightweight, gene-centric, relational database to support data mining environments. BMC Bioinform. S. A. Kirov, Xinxia Peng, E. Baker, Denise Schmoyer, Bing Zhang, Jay Snoddy