Ximei Luo

11 papers Journal 11
YearRankTypeTitle / Venue / Authors
2026 J jnl
AutoGERN: single-cell RNA-seq gene regulatory network inference via explicit link modeling and adaptive architectures.
Bioinform.
Jiacheng Wang, Yaojia Chen, Quan Zou, Ximei Luo
2025 J jnl
Accelerating Prediction of Antiviral Peptides Using Genetic Algorithm-Based Weighted Multiperspective Descriptors with Self-Normalized Deep Networks.
J. Chem. Inf. Model.
Shahid Akbar, Ali Raza, Quan Zou, Wajdi Alghamdi, Xiaorui Kang, Hashim Ali, Ximei Luo
2025 J jnl
Assessment and applications of joint profiling of single-cell chromatin accessibility and transcriptome.
Briefings Bioinform.
Hongfei Li, Jiechen Wang, Qing Liu, Quan Zou, Ximei Luo
2025 J jnl
BridgeSyn: a bridging fusion framework for drug combination synergy prediction.
Briefings Bioinform.
Qingyu Wang, Suwan Mao, Xiaoyan Liu, Quan Zou, Qing Liu, Xi Su, Junjie Wang, Wen Gao, Ximei Luo
2025 J jnl
Identifying the DNA methylation preference of transcription factors using ProtBERT and SVM.
PLoS Comput. Biol.
Yanchao Li, Quan Zou, Qi Dai, Antony Stalin, Ximei Luo
2025 J jnl
ReAlign-P: a vertical iterative realignment method for protein multiple sequence alignment.
Bioinform.
Yixiao Zhai, Pinglu Zhang, Quan Zou, Ximei Luo
2023 J jnl
Predicting active enhancers with DNA methylation and histone modification.
BMC Bioinform.
Ximei Luo, Qun Li, Yifan Tang, Yan Liu, Quan Zou, Jie Zheng, Ying Zhang, Lei Xu
2023 J jnl
Recall DNA methylation levels at low coverage sites using a CNN model in WGBS.
PLoS Comput. Biol.
Ximei Luo, Yansu Wang, Quan Zou, Lei Xu
2022 J jnl
Effector-GAN: prediction of fungal effector proteins based on pretrained deep representation learning methods and generative adversarial networks.
Bioinform.
Yansu Wang, Ximei Luo, Quan Zou
2022 J jnl
scESI: evolutionary sparse imputation for single-cell transcriptomes from nearest neighbor cells.
Briefings Bioinform.
Qiaoming Liu, Ximei Luo, Jie Li, Guohua Wang
2018 J jnl
MeDReaders: a database for transcription factors that bind to methylated DNA.
Nucleic Acids Res.
Guohua Wang, Ximei Luo, Jianan Wang, Jun Wan, Shuli Xia, Heng Zhu, Jiang Qian, Yadong Wang