Xihong Lin

19 papers A* 1Journal 18
YearRankTypeTitle / Venue / Authors
2026 J jnl
"Rebuilding" Statistics in the Age of AI: A Town Hall Discussion on Culture, Infrastructure, and Training.
CoRR
David L. Donoho, Jian Kang, Xihong Lin, Bhramar Mukherjee, Dan Nettleton, Rebecca Nugent, Abel Rodriguez, Eric P. Xing, Tian Zheng, Hongtu Zhu
2026 J jnl
Harnessing Synthetic Data from Generative AI for Statistical Inference.
CoRR
Ahmad Abdel-Azim, Ruoyu Wang, Xihong Lin
2025 J jnl
A statistical framework for multi-trait rare variant analysis in large-scale whole-genome sequencing studies.
Nat. Comput. Sci.
Xihao Li, Han Chen, Margaret Sunitha Selvaraj, Eric Van Buren, Hufeng Zhou, Yuxuan Wang, Ryan Sun, Zachary R. McCaw, Zhi Yu, Min-Zhi Jiang, Daniel DiCorpo, Sheila M. Gaynor, Rounak Dey, Donna K. Arnett, Emelia J. Benjamin, Joshua C. Bis, John Blangero, Eric Boerwinkle, Donald W. Bowden, Jennifer A. Brody, Brian E. Cade, April P. Carson, Jenna C. Carlson, Nathalie Chami, Yii-Der Ida Chen, Joanne E. Curran, Paul S. de Vries, Myriam Fornage, Nora Franceschini, Barry I. Freedman, Charles Gu, Nancy L. Heard-Costa, Jiang He, Lifang Hou, Yi-Jen Hung, Marguerite R. Irvin, Robert C. Kaplan, Sharon L. R. Kardia, Tanika N. Kelly, Iain R. Konigsberg, Charles L. Kooperberg, Brian G. Kral, Changwei Li, Yun Li, Honghuang Lin, Ching-Ti Liu, Ruth J. F. Loos, Michael C. Mahaney, Lisa W. Martin, Rasika A. Mathias, Braxton D. Mitchell, May E. Montasser, Alanna C. Morrison, Take Naseri, Kari E. North, Nicholette D. Palmer, Patricia A. Peyser, Bruce M. Psaty, Susan Redline, Alexander P. Reiner, Stephen S. Rich, Colleen M. Sitlani, Jennifer A. Smith, Kent D. Taylor, Hemant K. Tiwari, Ramachandran S. Vasan, Satupa'itea Viali, Zhe Wang, Jennifer Wessel, Lisa R. Yanek, Bing Yu, NHLBI Trans-Omics for Precision Medicine Consortium, Josée Dupuis, James B. Meigs, Paul L. Auer, Laura M. Raffield, Alisa K. Manning, Kenneth M. Rice, Jerome I. Rotter, Gina M. Peloso, Pradeep Natarajan, Zilin Li, Zhonghua Liu, Xihong Lin
2025 J jnl
Advancing real-time infectious disease forecasting using large language models.
Nat. Comput. Sci.
Hongru Du, Yang Zhao, Jianan Zhao, Shaochong Xu, Xihong Lin, Yiran Chen, Lauren M. Gardner, Hao (Frank) Yang
2025 J jnl
CellForge: Agentic Design of Virtual Cell Models.
CoRR
Xiangru Tang, Zhuoyun Yu, Jiapeng Chen, Yan Cui, Daniel Shao, Weixu Wang, Fang Wu, Yuchen Zhuang, Wenqi Shi, Zhi Huang, Arman Cohan, Xihong Lin, Fabian J. Theis, Smita Krishnaswamy, Mark Gerstein
2024 J jnl
Advancing Real-time Pandemic Forecasting Using Large Language Models: A COVID-19 Case Study.
CoRR
Hongru Du, Jianan Zhao, Yang Zhao, Shaochong Xu, Xihong Lin, Yiran Chen, Lauren M. Gardner, Hao (Frank) Yang
2024 A* conf
Empower an End-to-end Scalable and Interpretable Data Science Ecosystem using Statistics, AI and Domain Science.
KDD
Xihong Lin
2023 J jnl
FAVOR: functional annotation of variants online resource and annotator for variation across the human genome.
Nucleic Acids Res.
Hufeng Zhou, Theodore Arapoglou, Xihao Li, Zilin Li, Xiuwen Zheng, Jill Moore, Abhijith Asok, Sushant Kumar, Elizabeth E. Blue, Steven Buyske, Nancy J. Cox, Adam Felsenfeld, Mark Gerstein, Eimear Kenny, Bingshan Li, Tara Cox Matise, Anthony Philippakis, Heidi L. Rehm, Heidi J. Sofia, Grace Snyder, Zhiping Weng, Benjamin M. Neale, Shamil R. Sunyaev, Xihong Lin
2022 J jnl
COVID-19 Spread Mapper: a multi-resolution, unified framework and open-source tool.
Bioinform.
Andy Shi, Sheila M. Gaynor, Rounak Dey, Haoyu Zhang, Corbin Quick, Xihong Lin
2022 J jnl
Caught in the Crossfire: Fears of Chinese-American Scientists.
CoRR
Yu Xie, Xihong Lin, Ju Li, Qian He, Junming Huang
2022 J jnl
STAAR workflow: a cloud-based workflow for scalable and reproducible rare variant analysis.
Bioinform.
Sheila M. Gaynor, Kenneth E. Westerman, Lea L. Ackovic, Xihao Li, Zilin Li, Alisa Manning, Anthony A. Philippakis, Xihong Lin
2019 J jnl
Identification of differentially expressed gene sets using the Generalized Berk-Jones statistic.
Bioinform.
Sheila M. Gaynor, Ryan Sun, Xihong Lin, John Quackenbush
2017 J jnl
FDR control of detected regions by multiscale matched filtering.
Commun. Stat. Simul. Comput.
Nezamoddin Nezamoddini-Kachouie, Xihong Lin, Armin Schwartzman
2017 J jnl
Rare variant association test in family-based sequencing studies.
Briefings Bioinform.
Xuefeng Wang, Zhenyu Zhang, Nathan Morris, Tianxi Cai, Seunggeun Lee, Chaolong Wang, Timothy W. Yu, Christopher A. Walsh, Xihong Lin
2016 J jnl
CpGFilter: model-based CpG probe filtering with replicates for epigenome-wide association studies.
Bioinform.
Jun Chen, Allan C. Just, Joel Schwartz, Lifang Hou, Nadereh Jafari, Zhifu Sun, Jean-Pierre A. Kocher, Andrea A. Baccarelli, Xihong Lin
2013 J jnl
Gene set analysis using variance component tests.
BMC Bioinform.
Yen-Tsung Huang, Xihong Lin
2009 J jnl
Sparse linear discriminant analysis for simultaneous testing for the significance of a gene set/pathway and gene selection.
Bioinform.
Michael C. Wu, Lingsong Zhang, Zhaoxi Wang, David Christiani, Xihong Lin
2008 J jnl
Estimation and testing for the effect of a genetic pathway on a disease outcome using logistic kernel machine regression via logistic mixed models.
BMC Bioinform.
Dawei Liu, Debashis Ghosh, Xihong Lin
2007 J jnl
Quantitative quality-assessment techniques to compare fractionation and depletion methods in SELDI-TOF mass spectrometry experiments.
Bioinform.
Jaroslaw Harezlak, Mike Wang, David Christiani, Xihong Lin