Xiguo Yuan

34 papers C 1Journal 31Unranked 2
YearRankTypeTitle / Venue / Authors
2026 J jnl
Hi-Enhancer: a two-stage framework for prediction and localization of enhancers based on Blending-KAN and Stacking-Auto models.
Bioinform.
Aimin Li, Haotian Zhou, Rong Fei, Juntao Zou, Xiguo Yuan, Yajun Liu, Saurav Mallik, Xinhong Hei, Lei Wang
2026 J jnl
Representation learning for 12-lead ECGs via dual-view conditional diffusion and lead-aware attention.
Inf. Process. Manag.
Fanyi Yang, Xue Li, Wentao Wang, Xiguo Yuan
2025 J jnl
COPCNVBD: An Integrated Approach for Somatic Copy Number Variation and Breakpoint Detection Using Whole Genome Sequencing Data.
IEEE Trans. Comput. Biol. Bioinform.
Yaoyao Li, Yajie Yan, Xiguo Yuan
2024 J jnl
A granularity data method for power frequency electric and electromagnetic fields forecasting based on T-S fuzzy model.
Complex Intell. Syst.
Peng Nie, Qiang Yu, Zhenkun Li, Xiguo Yuan
2023 J jnl
LDSSNV: A Linkage Disequilibrium-Based Method for the Detection of Somatic Single-Nucleotide Variants.
IEEE ACM Trans. Comput. Biol. Bioinform.
Jingfen Lan, Wenxiang Chen, Ganggang Yin, Haque A. K. Alvi, Kun Xie, Qiang Yu, Xiguo Yuan
2022 J jnl
Detection of copy number variations from NGS data by using an adaptive kernel density estimation-based outlier factor.
Digit. Signal Process.
Haque A. K. Alvi, Kun Xie, Kang Liu, Haiyong Zhao, Xiaohui Yang, Xiguo Yuan
2022 J jnl
Enhancing the prediction of protein coding regions in biological sequence via a deep learning framework with hybrid encoding.
Digit. Signal Process.
Chao Wei, Junying Zhang, Xiguo Yuan
2022 — conf
Greedy-mRMR: An emotion recognition algorithm based on EEG using greedy algorithm.
BIBM
Liying Yang, Qingyang Zhang, Si Chao, Dunhui Liu, Xiguo Yuan
2022 J jnl
IhybCNV: An intra-hybrid approach for CNV detection from next-generation sequencing data.
Digit. Signal Process.
Kun Xie, Kang Liu, Haque A. K. Alvi, Wenyue Ji, Shuzhen Wang, Liang Chang, Xiguo Yuan
2021 J jnl
A Local Outlier Factor-Based Detection of Copy Number Variations From NGS Data.
IEEE ACM Trans. Comput. Biol. Bioinform.
Xiguo Yuan, Junping Li, Jun Bai, Jianing Xi
2021 J jnl
CNV_IFTV: An Isolation Forest and Total Variation-Based Detection of CNVs from Short-Read Sequencing Data.
IEEE ACM Trans. Comput. Biol. Bioinform.
Xiguo Yuan, Jiaao Yu, Jianing Xi, Liying Yang, Junliang Shang, Zhe Li, Junbo Duan
2021 J jnl
DeepTIS: Improved translation initiation site prediction in genomic sequence via a two-stage deep learning model.
Digit. Signal Process.
Chao Wei, Junying Zhang, Xiguo Yuan
2021 J jnl
Detection and inference of interspersed duplicated insertions from paired-end reads.
Digit. Signal Process.
Xiguo Yuan, Wenlu Xie, Hongzhi Yang, Jun Bai, Ruwu Yang, Guojun Liu, Haque A. K. Alvi
2021 J jnl
ERINS: Novel Sequence Insertion Detection by Constructing an Extended Reference.
IEEE ACM Trans. Comput. Biol. Bioinform.
Xiguo Yuan, Xiangyan Xu, Haiyong Zhao, Junbo Duan
2021 J jnl
NeuroTIS: Enhancing the prediction of translation initiation sites in mRNA sequences via a hybrid dependency network and deep learning framework.
Knowl. Based Syst.
Chao Wei, Junying Zhang, Xiguo Yuan, Zongzhen He, Guojun Liu, Jinhui Wu
2021 J jnl
STIC: Predicting Single Nucleotide Variants and Tumor Purity in Cancer Genome.
IEEE ACM Trans. Comput. Biol. Bioinform.
Xiguo Yuan, Chao Ma, Haiyong Zhao, Liying Yang, Shuzhen Wang, Jianing Xi
2020 J jnl
CONDEL: Detecting Copy Number Variation and Genotyping Deletion Zygosity from Single Tumor Samples Using Sequence Data.
IEEE ACM Trans. Comput. Biol. Bioinform.
Xiguo Yuan, Jun Bai, Junying Zhang, Liying Yang, Junbo Duan, Yaoyao Li, Meihong Gao
2020 J jnl
CRSCNV: A Cross-Model-Based Statistical Approach to Detect Copy Number Variations in Sequence Data.
IEEE Access
Guojun Liu, Xiguo Yuan, Junying Zhang, Haiyong Zhao, Junping Li, Junbo Duan
2020 J jnl
Comparative study of whole exome sequencing-based copy number variation detection tools.
BMC Bioinform.
Lanling Zhao, Han Liu, Xiguo Yuan, Kun Gao, Junbo Duan
2020 J jnl
Inferring subgroup-specific driver genes from heterogeneous cancer samples via subspace learning with subgroup indication.
Bioinform.
Jianing Xi, Xiguo Yuan, Minghui Wang, Ao Li, Xuelong Li, Qinghua Huang
2020 J jnl
SVSR: A Program to Simulate Structural Variations and Generate Sequencing Reads for Multiple Platforms.
IEEE ACM Trans. Comput. Biol. Bioinform.
Xiguo Yuan, Meihong Gao, Jun Bai, Junbo Duan
2020 J jnl
dpGMM: A Dirichlet Process Gaussian Mixture Model for Copy Number Variation Detection in Low-Coverage Whole-Genome Sequencing Data.
IEEE Access
Yaoyao Li, Junying Zhang, Xiguo Yuan, Junping Li
2019 J jnl
BagGMM: Calling copy number variation by bagging multiple Gaussian mixture models from tumor and matched normal next-generation sequencing data.
Digit. Signal Process.
Yaoyao Li, Junying Zhang, Xiguo Yuan
2019 J jnl
Identification of PIWI-interacting RNA modules by weighted correlation network analysis.
Clust. Comput.
Yajun Liu, Junying Zhang, Aimin Li, Yuanyuan Zhang, Yaoyao Li, Xiguo Yuan, Zhongzhen He, Zhaowen Liu, Shouheng Tuo
2019 J jnl
NIPMI: A Network Method Based on Interaction Part Mutual Information to Detect Characteristic Genes From Integrated Data on Multi-Cancers.
IEEE Access
Qian Ding, Junliang Shang, Yan Sun, Guangshuai Liu, Feng Li, Xiguo Yuan, Jin-Xing Liu
2018 J jnl
A new differential evolution algorithm for solving multimodal optimization problems with high dimensionality.
Soft Comput.
Shouheng Tuo, Junying Zhang, Xiguo Yuan, Longquan Yong
2017 J jnl
Analysis of breast cancer subtypes by AP-ISA biclustering.
BMC Bioinform.
Liying Yang, Yunyan Shen, Xiguo Yuan, Junying Zhang, Jianhua Wei
2017 J jnl
IntSIM: An Integrated Simulator of Next-Generation Sequencing Data.
IEEE Trans. Biomed. Eng.
Xiguo Yuan, Junying Zhang, Liying Yang
2015 J jnl
A harmony search algorithm for high-dimensional multimodal optimization problems.
Digit. Signal Process.
Shouheng Tuo, Junying Zhang, Longquan Yong, Xiguo Yuan, Baobao Liu, Xiaoyang Xu, Fang'an Deng
2014 J jnl
AISAIC: a software suite for accurate identification of significant aberrations in cancers.
Bioinform.
Bai Zhang, Xuchu Hou, Xiguo Yuan, Ie-Ming Shih, Zhen Zhang, Robert Clarke, Roger R. Wang, Yi Fu, Subha Madhavan, Yue Joseph Wang, Guoqiang Yu
2013 J jnl
mirPD: A pattern-based approach for identifying microRNAs from deep sequencing data.
Digit. Signal Process.
Xiaohan Sun, Junying Zhang, Aimin Li, Xiguo Yuan
2012 — conf
Accurate identification of significant aberrations in contaminated cancer genome.
GENSiPS
Xuchu Hou, Guoqiang Yu, Xiguo Yuan, Bai Zhang, Ie-Ming Shih, Zhen Zhang, Robert Clarke, Subha Madhavan
2012 J jnl
An Overview of Population Genetic Data Simulation.
J. Comput. Biol.
Xiguo Yuan, David J. Miller, Junying Zhang, David M. Herrington, Yue Wang
2007 C conf
Investigating Novel Immune-Inspired Multi-agent Systems for Anomaly Detection.
APSCC
Haidong Fu, Xiguo Yuan, Kui Zhang, Xiaolong Zhang, Qi Xie