Xiaoquan Su

22 papers Journal 18Unranked 4
YearRankTypeTitle / Venue / Authors
2026 J jnl
MEFE: microbiome signature identification based on elastic feature extraction.
Frontiers Comput. Sci.
Guosen Hou, Yuxiao Fei, Hao Gao, Xiaoquan Su
2025 J jnl
CAM-net: a context-aware network for identifying reliable microbial relations via propagation cliques.
Briefings Bioinform.
Junhui Zhang, Wenfei Xu, Jieqi Xing, Yangyang Sun, Shi Huang, Xiaoquan Su
2025 — conf
Concisemizer: An Asymmetric Redundancy-Removal Algorithm for Efficient Seed Sampling in Large-Scale Sequence Alignment.
BIBM
Hao Gao, Yangyang Sun, Xiaoquan Su
2025 J jnl
TaxaCal: enhancing species-level profiling accuracy of 16S amplicon data.
BMC Bioinform.
Qingrong Shen, Xiaoqian Fan, Yangyang Sun, Hao Gao, Xiaoquan Su
2025 — conf
TheraPepNet: Enhancing Therapeutic Peptide Recognition via Temporal Sequence Prediction Networks and Preprocessed Features.
BIBM
Jia Tian, Zhenming Wu, Xiaoquan Su, Jin Zhao
2024 J jnl
A deep learning framework for predicting disease-gene associations with functional modules and graph augmentation.
BMC Bioinform.
Xianghu Jia, Weiwen Luo, Jiaqi Li, Jieqi Xing, Hongjie Sun, Shunyao Wu, Xiaoquan Su
2023 J jnl
Flex Meta-Storms elucidates the microbiome local beta-diversity under specific phenotypes.
Bioinform.
Mingqian Zhang, Wenke Zhang, Yuzhu Chen, Jin Zhao, Shunyao Wu, Xiaoquan Su
2023 J jnl
Host-Variable-Embedding Augmented Microbiome-Based Simultaneous Detection of Multiple Diseases by Deep Learning.
Adv. Intell. Syst.
Shunyao Wu, Zhiruo Li, Yuzhu Chen, Mingqian Zhang, Yangyang Sun, Jieqi Xing, Fengyang Zhao, Shi Huang, Rob Knight, Xiaoquan Su
2020 J jnl
Dynamic Meta-Storms enables comprehensive taxonomic and phylogenetic comparison of shotgun metagenomes at the species level.
Bioinform.
Gongchao Jing, Yufeng Zhang, Ming Yang, Lu Liu, Jian Xu, Xiaoquan Su
2016 J jnl
MultiGeMS: detection of SNVs from multiple samples using model selection on high-throughput sequencing data.
Bioinform.
Gabriel H. Murillo, Na You, Xiaoquan Su, Wei Cui, Muredach P. Reilly, Mingyao Li, Kang Ning, Xinping Cui
2015 J jnl
Application of Meta-Mesh on the analysis of microbial communities from human associated-habitats.
Quant. Biol.
Xiaoquan Su, Xiaojun Wang, Gongchao Jing, Shi Huang, Jian Xu, Kang Ning
2015 J jnl
Condensing Raman spectrum for single-cell phenotype analysis.
BMC Bioinform.
Shiwei Sun, Xuetao Wang, Xin Gao, Lihui Ren, Xiaoquan Su, Dongbo Bu, Kang Ning
2014 J jnl
DNA Extraction Protocol for Biological Ingredient Analysis of Liuwei Dihuang Wan.
Genom. Proteom. Bioinform.
Xinwei Cheng, Xiaohua Chen, Xiaoquan Su, Huanxin Zhao, Maozhen Han, Cunpei Bo, Jian Xu, Hong Bai, Kang Ning
2014 J jnl
GPU-Meta-Storms: computing the structure similarities among massive amount of microbial community samples using GPU.
Bioinform.
Xiaoquan Su, Xuetao Wang, Gongchao Jing, Kang Ning
2014 J jnl
Meta-QC-Chain: Comprehensive and Fast Quality Control Method for Metagenomic Data.
Genom. Proteom. Bioinform.
Qian Zhou, Xiaoquan Su, Gongchao Jing, Kang Ning
2014 J jnl
Microbial community pattern detection in human body habitats via ensemble clustering framework.
BMC Syst. Biol.
Peng Yang, Xiaoquan Su, Le Ou-Yang, Hon Nian Chua, Xiaoli Li, Kang Ning
2014 J jnl
Microbial community pattern detection in human body habitats via ensemble clustering framework.
CoRR
Peng Yang, Xiaoquan Su, Le Ou-Yang, Hon Nian Chua, Xiaoli Li, Kang Ning
2012 — conf
A machine learning framework of functional biomarker discovery for different microbial communities based on metagenomic data.
ISB
Wei Fang, Xingzhi Chang, Xiaoquan Su, Jian Xu, Deli Zhang, Kang Ning
2012 J jnl
Meta-Storms: efficient search for similar microbial communities based on a novel indexing scheme and similarity score for metagenomic data.
Bioinform.
Xiaoquan Su, Jian Xu, Kang Ning
2012 J jnl
Parallel-META: efficient metagenomic data analysis based on high-performance computation.
BMC Syst. Biol.
Xiaoquan Su, Jian Xu, Kang Ning
2012 J jnl
SNP calling using genotype model selection on high-throughput sequencing data.
Bioinform.
Na You, Gabriel H. Murillo, Xiaoquan Su, Xiaowei Zeng, Jian Xu, Kang Ning, Shoudong Zhang, Jiankang Zhu, Xinping Cui
2011 — conf
An Open-source Collaboration Environment for Metagenomics Research.
eScience
Xiaoquan Su, Yongzheng Ma, Hongwei Yang, Xingzhi Chang, Kai Nan, Jian Xu, Kang Ning