Xiaomin Fang

41 papers A* 4A 1B 1C 2Journal 31Unranked 2
YearRankTypeTitle / Venue / Authors
2026 J jnl
End-to-End Reverse Screening Identifies Protein Targets of Small Molecules Using HelixFold3.
CoRR
Shengjie Xu, Xianbin Ye, Mengran Zhu, Xiaonan Zhang, Shanzhuo Zhang, Xiaomin Fang
2025 J jnl
BioScore: A Foundational Scoring Function For Diverse Biomolecular Complexes.
CoRR
Yuchen Zhu, Jihong Chen, Yitong Li, Xiaomin Fang, Xianbin Ye, Jingzhou He, Xujun Zhang, Jingxuan Ge, Chao Shen, Xiaonan Zhang, Tingjun Hou, Chang-Yu Hsieh
2025 J jnl
HelixDesign-Antibody: A Scalable Production-Grade Platform for Antibody Design Built on HelixFold3.
CoRR
Jie Gao, Jing Hu, Shanzhuo Zhang, Kunrui Zhu, Sheng Qian, Yueyang Huang, Xiaonan Zhang, Xiaomin Fang
2025 J jnl
HelixDesign-Binder: A Scalable Production-Grade Platform for Binder Design Built on HelixFold3.
CoRR
Jie Gao, Jun Li, Jing Hu, Shanzhuo Zhang, Kunrui Zhu, Yueyang Huang, Xiaonan Zhang, Xiaomin Fang
2025 J jnl
State-Specific Peptide Design Targeting G Protein-Coupled Receptors.
J. Chem. Inf. Model.
Yang Xue, Hong Wang, Jun Li, Jianguo Hu, Zhiyuan Chen, Zhi Zheng, Lihang Liu, Kunrui Zhu, Jingzhou He, Huanzhang Gong, Xiangqun Li, Xiaonan Zhang, Xiaomin Fang
2024 J jnl
HelixFold-Multimer: Elevating Protein Complex Structure Prediction to New Heights.
CoRR
Xiaomin Fang, Jie Gao, Jing Hu, Lihang Liu, Yang Xue, Xiaonan Zhang, Kunrui Zhu
2024 J jnl
Precise Antigen-Antibody Structure Predictions Enhance Antibody Development with HelixFold-Multimer.
CoRR
Jie Gao, Jing Hu, Lihang Liu, Yang Xue, Kunrui Zhu, Xiaonan Zhang, Xiaomin Fang
2024 J jnl
Technical Report of HelixFold3 for Biomolecular Structure Prediction.
CoRR
Lihang Liu, Shanzhuo Zhang, Yang Xue, Xianbin Ye, Kunrui Zhu, Yuxin Li, Yang Liu, Xiaonan Zhang, Xiaomin Fang
2024 J jnl
Unifying Sequences, Structures, and Descriptions for Any-to-Any Protein Generation with the Large Multimodal Model HelixProtX.
CoRR
Zhiyuan Chen, Tianhao Chen, Chenggang Xie, Yang Xue, Xiaonan Zhang, Jingbo Zhou, Xiaomin Fang
2023 J jnl
A method for multiple-sequence-alignment-free protein structure prediction using a protein language model.
Nat. Mac. Intell.
Xiaomin Fang, Fan Wang, Lihang Liu, Jingzhou He, Dayong Lin, Yingfei Xiang, Kunrui Zhu, Xiaonan Zhang, Hua Wu, Hui Li, Le Song
2023 J jnl
Deep Learning with Geometry-Enhanced Molecular Representation for Augmentation of Large-Scale Docking-Based Virtual Screening.
J. Chem. Inf. Model.
Lan Yu, Xiao He, Xiaomin Fang, Lihang Liu, Jinfeng Liu
2023 J jnl
Pre-Training on Large-Scale Generated Docking Conformations with HelixDock to Unlock the Potential of Protein-ligand Structure Prediction Models.
CoRR
Lihang Liu, Donglong He, Xianbin Ye, Shanzhuo Zhang, Xiaonan Zhang, Jingbo Zhou, Jun Li, Hua Chai, Fan Wang, Jingzhou He, Liang Zheng, Yonghui Li, Xiaomin Fang
2022 J jnl
BatchDTA: implicit batch alignment enhances deep learning-based drug-target affinity estimation.
Briefings Bioinform.
Hongyu Luo, Yingfei Xiang, Xiaomin Fang, Wei Li, Fan Wang, Hua Wu, Haifeng Wang
2022 J jnl
DTSyn: a dual-transformer-based neural network to predict synergistic drug combinations.
Briefings Bioinform.
Jing Hu, Jie Gao, Xiaomin Fang, Zijing Liu, Fan Wang, Weili Huang, Hua Wu, Guodong Zhao
2022 A conf
DuETA: Traffic Congestion Propagation Pattern Modeling via Efficient Graph Learning for ETA Prediction at Baidu Maps.
CIKM
Jizhou Huang, Zhengjie Huang, Xiaomin Fang, Shikun Feng, Xuyi Chen, Jiaxiang Liu, Haitao Yuan, Haifeng Wang
2022 J jnl
DuETA: Traffic Congestion Propagation Pattern Modeling via Efficient Graph Learning for ETA Prediction at Baidu Maps.
CoRR
Jizhou Huang, Zhengjie Huang, Xiaomin Fang, Shikun Feng, Xuyi Chen, Jiaxiang Liu, Haitao Yuan, Haifeng Wang
2022 J jnl
Efficient AlphaFold2 Training using Parallel Evoformer and Branch Parallelism.
CoRR
Guoxia Wang, Zhihua Wu, Xiaomin Fang, Yingfei Xiang, Yiqun Liu, Dianhai Yu, Yanjun Ma
2022 J jnl
GEM-2: Next Generation Molecular Property Prediction Network with Many-body and Full-range Interaction Modeling.
CoRR
Lihang Liu, Donglong He, Xiaomin Fang, Shanzhuo Zhang, Fan Wang, Jingzhou He, Hua Wu
2022 J jnl
Geometry-enhanced molecular representation learning for property prediction.
Nat. Mach. Intell.
Xiaomin Fang, Lihang Liu, Jieqiong Lei, Donglong He, Shanzhuo Zhang, Jingbo Zhou, Fan Wang, Hua Wu, Haifeng Wang
2022 J jnl
HelixADMET: a robust and endpoint extensible ADMET system incorporating self-supervised knowledge transfer.
Bioinform.
Shanzhuo Zhang, Zhiyuan Yan, Yueyang Huang, Lihang Liu, Donglong He, Wei Wang, Xiaomin Fang, Xiaonan Zhang, Fan Wang, Hua Wu, Haifeng Wang
2022 J jnl
HelixADMET: a robust and endpoint extensible ADMET system incorporating self-supervised knowledge transfer.
CoRR
Shanzhuo Zhang, Zhiyuan Yan, Yueyang Huang, Lihang Liu, Donglong He, Wei Wang, Xiaomin Fang, Xiaonan Zhang, Fan Wang, Hua Wu, Haifeng Wang
2022 J jnl
HelixFold-Single: MSA-free Protein Structure Prediction by Using Protein Language Model as an Alternative.
CoRR
Xiaomin Fang, Fan Wang, Lihang Liu, Jingzhou He, Dayong Lin, Yingfei Xiang, Xiaonan Zhang, Hua Wu, Hui Li, Le Song
2022 J jnl
HelixFold: An Efficient Implementation of AlphaFold2 using PaddlePaddle.
CoRR
Guoxia Wang, Xiaomin Fang, Zhihua Wu, Yiqun Liu, Yang Xue, Yingfei Xiang, Dianhai Yu, Fan Wang, Yanjun Ma
2022 — conf
HelixMO: Sample-Efficient Molecular Optimization in Scene-Sensitive Latent Space.
BIBM
Zhiyuan Chen, Xiaomin Fang, Zixu Hua, Yueyang Huang, Fan Wang, Hua Wu
2022 J jnl
TCR: A Transformer Based Deep Network for Predicting Cancer Drugs Response.
CoRR
Jie Gao, Jing Hu, Wanqing Sun, Yili Shen, Xiaonan Zhang, Xiaomin Fang, Fan Wang, Guodong Zhao
2021 J jnl
CELLS: Cost-Effective Evolution in Latent Space for Goal-Directed Molecular Generation.
CoRR
Zhiyuan Chen, Xiaomin Fang, Fan Wang, Xiaotian Fan, Hua Wu, Haifeng Wang
2021 J jnl
ChemRL-GEM: Geometry Enhanced Molecular Representation Learning for Property Prediction.
CoRR
Xiaomin Fang, Lihang Liu, Jieqiong Lei, Donglong He, Shanzhuo Zhang, Jingbo Zhou, Fan Wang, Hua Wu, Haifeng Wang
2021 J jnl
LiteGEM: Lite Geometry Enhanced Molecular Representation Learning for Quantum Property Prediction.
CoRR
Shanzhuo Zhang, Lihang Liu, Sheng Gao, Donglong He, Xiaomin Fang, Weibin Li, Zhengjie Huang, Weiyue Su, Wenjin Wang
2021 — conf
Multimodal Pre-Training Model for Sequence-based Prediction of Protein-Protein Interaction.
MLBC
Yang Xue, Zijing Liu, Xiaomin Fang, Fan Wang
2021 J jnl
Multimodal Pre-Training Model for Sequence-based Prediction of Protein-Protein Interaction.
CoRR
Yang Xue, Zijing Liu, Xiaomin Fang, Fan Wang
2021 A* conf
SSML: Self-Supervised Meta-Learner for En Route Travel Time Estimation at Baidu Maps.
KDD
Xiaomin Fang, Jizhou Huang, Fan Wang, Lihang Liu, Yibo Sun, Haifeng Wang
2020 A* conf
ConSTGAT: Contextual Spatial-Temporal Graph Attention Network for Travel Time Estimation at Baidu Maps.
KDD
Xiaomin Fang, Jizhou Huang, Fan Wang, Lingke Zeng, Haijin Liang, Haifeng Wang
2019 J jnl
MBCAL: A Simple and Efficient Reinforcement Learning Method for Recommendation Systems.
CoRR
Fan Wang, Xiaomin Fang, Lihang Liu, Hao Tian, Zhiming Peng
2019 J jnl
Sequential Evaluation and Generation Framework for Combinatorial Recommender System.
CoRR
Fan Wang, Xiaomin Fang, Lihang Liu, Yaxue Chen, Jiucheng Tao, Zhiming Peng, Cihang Jin, Hao Tian
2018 J jnl
A Review of Turbidity Detection Based on Computer Vision.
IEEE Access
Yeqi Liu, Yingyi Chen, Xiaomin Fang
2018 J jnl
Real time expert system for anomaly detection of aerators based on computer vision technology and existing surveillance cameras.
CoRR
Yeqi Liu, Yingyi Chen, HuiHui Yu, Xiaomin Fang, Chuanyang Gong
2015 A* conf
Personalized Tag Recommendation through Nonlinear Tensor Factorization Using Gaussian Kernel.
AAAI
Xiaomin Fang, Rong Pan, Guoxiang Cao, Xiuqiang He, Wenyuan Dai
2014 A* conf
Fast DTT: a near linear algorithm for decomposing a tensor into factor tensors.
KDD
Xiaomin Fang, Rong Pan
2011 B conf
Text Line Based Correction of Distorted Document Images.
TrustCom
Sanding Luo, Xiaomin Fang, Cong Zhao, Yisha Luo
2006 C conf
Middle Pleistocene Climate Transition: Evidences from Rock Magnetic Record of Chinese Loess-paleosol Sequence.
IGARSS
Yougui Song, Masayuki Torii, Xiaomin Fang, Naoto Ishikawa
2005 C conf
The evolution of river topography of Northern Tibet since 8Ma B P.
IGARSS
Kaidao Fu, Xiaomin Fang, Chunhui Song, Qingquan Meng, Yougui Song