Xiaohua Wan

53 papers A* 2A 1B 2C 3Misc 1Journal 17Unranked 27
YearRankTypeTitle / Venue / Authors
2026 A* conf
Cyto-SSL: A Self-Supervised Pretraining Framework for Cytology Foundation Model.
AAAI
Yiming Zhang, Rui Yan, Xiaohua Wan, Yifan Zhao, Shuang Feng, Zhetao Xu, Ying Wang, Fa Zhang, Bin Hu
2026 J jnl
Point cloud deformation modeling for particle selection following cryo-EM 2D classification.
BMC Bioinform.
Xuan Wang, Zhengao Mo, Fuwei Li, Fa Zhang, Xiaohua Wan
2026 A* conf
ST-LLM: Spatial Transcriptomics Embedding with Large Language Models.
AAAI
Zhetao Xu, Xiaohua Wan, Le Li, Shuang Feng, Yiming Zhang, Fa Zhang, Bin Hu
2025 J jnl
Central Feature Network Enables Accurate Detection of Both Small and Large Particles in Cryo-Electron Tomography.
J. Comput. Sci. Technol.
Yaoyu Wang, Xiaohua Wan, Cheng Chen, Fa Zhang, Xuefeng Cui
2025 J jnl
Enhancing Colorectal Lesion Segmentation Through Internal Feature Extraction and Computational Modeling Insights.
IEEE Trans. Comput. Soc. Syst.
Xiaohua Wan, Yulong Hu, Dehui Qiu, Rui Li, Liguo Deng, Tinghui Ye, Shengtao Zhu, Xiujing Sun, Qian Zhang, Weilong Yao, Fa Zhang, Kun Wang
2025 — conf
FSPicker: A Dual-Stream Attention Network for Multi-scale Particle Picking in Cryo-Electron Tomography.
ISBRA (1)
Xuan Wang, Wenhao Tian, Zhengao Mo, Chunyi Li, Xiaohua Wan, Fa Zhang
2025 J jnl
Toward a New Fusion Paradigm: Integrating Specificity and Heterogeneity in Multimodal Biomedicine Data.
IEEE Trans. Comput. Soc. Syst.
Fa Zhang, Shuang Feng, Xiaohua Wan, Bin Hu
2024 — conf
Central Feature Network Enables Accurate Detection of Both Small and Large Particles in Cryo-Electron Tomography.
ISBRA (1)
Yaoyu Wang, Xiaohua Wan, Cheng Chen, Fa Zhang, Xuefeng Cui
2024 — conf
Com-DNB: A novel method for identifying critical states of complex biological processes and its parallelization.
BCB
Letian Wang, Yanbing Zhu, Xiaohua Wan, Yiming Zhang, Shuang Feng, Chang Li, Fa Zhang, Bin Hu
2024 — conf
IG-GRD: A Model Based on Disentangled Graph Representation Learning for Imaging Genetic Data Fusion.
ICIC (2)
Shuang Feng, Letian Wang, Chang Li, Xiaohua Wan, Fa Zhang, Bin Hu
2024 — conf
Innovative 3D CTF Correction Techniques for Cryo-ET of Individual Particles.
BIBM
Xuan Wang, Shiwei Liu, Xinsheng Wang, Xiaohua Wan, Fa Zhang
2024 J jnl
MSTCA-Net: A Novel Impervious Surface Extraction Method Based on a Multistage Transformer.
IEEE J. Sel. Top. Appl. Earth Obs. Remote. Sens.
Xiaohua Wan, Wenjing Zhang, Dehui Qiu, Sijia Li, Fa Zhang, Zhongchang Sun, Bin Hu
2024 — conf
SS-SwinUnet: A Distillation Method of Swin Transformer for Superior Ocular Image Segmentation.
BIBM
Bowei Ma, Dehui Qiu, Ze Xiong, Yulong Hu, Liguo Deng, Huimei Yuan, Xiaohua Wan, Fa Zhang
2024 — conf
SelfAlign: Achieving Subtomogram Alignment with Self-Supervised Deep Learning.
BIBM
Xuan Wang, Haofan Cao, Xinsheng Wang, Xiaohua Wan, Fa Zhang
2023 C conf
A Novel Impervious Surface Extraction Method Based on Transformer.
IGARSS
Wenjing Zhang, Dehui Qiu, Xiaohua Wan, Fa Zhang, Huimei Yuan
2023 — conf
A Tongue Feature Extraction Method Based on a Sublingual Vein Segmentation.
BIBM
Yulong Hu, Dehui Qiu, Xiaohua Wan, Juan Zhang, Xiaotong Wang, Fa Zhang, Bin Hu
2023 J jnl
A novel tongue feature extraction method on mobile devices.
Biomed. Signal Process. Control.
Dehui Qiu, Xinyue Zhang, Xiaohua Wan, Jiacheng Li, Ziheng Xu, Senlin Lin, Fa Zhang, Xuekun Song, Rui Zhang, Yulong Chen, Yuling Zheng
2023 — conf
GPU Optimization of Biological Macromolecule Multi-tilt Electron Tomography Reconstruction Algorithm.
ICIC (3)
Zi-Ang Fu, Xiaohua Wan, Fa Zhang
2022 — conf
A Segmentation-aware Synergy Network for Single Particle Recognition in Cryo-EM.
BIBM
Shuo Li, Hongjia Li, Chi Zhang, Fa Zhang, Xiaohua Wan
2022 J jnl
A Transfer Learning-Based Classification Model for Particle Pruning in Cryo-Electron Microscopy.
J. Comput. Biol.
Hongjia Li, Ge Chen, Shan Gao, Jintao Li, Xiaohua Wan, Fa Zhang
2022 C conf
CSAM: A Channel and Spatial Attention Mechanism for Impervious Surface Extraction in Difficult Areas.
IGARSS
Fangyuan Zhao, Xiaohua Wan, Sijia Li, Zhongchang Sun, Wenjing Zhang, Dehui Qiu, Fa Zhang, Xinyu Liu, Guangming Tan
2022 J jnl
Noise-Transfer2Clean: denoising cryo-EM images based on noise modeling and transfer.
Bioinform.
Hongjia Li, Hui Zhang, Xiaohua Wan, Zhidong Yang, Chengmin Li, Jintao Li, Renmin Han, Ping Zhu, Fa Zhang
2022 — conf
Temporal Correlation Network for Video Polyp Segmentation.
BIBM
Ziheng Xu, Dehui Qiu, Senlin Lin, Xinyue Zhang, Sheng Shi, Shengtao Zhu, Fa Zhang, Xiaohua Wan
2022 J jnl
VP-Detector: A 3D multi-scale dense convolutional neural network for macromolecule localization and classification in cryo-electron tomograms.
Comput. Methods Programs Biomed.
Yu Hao, Xiaohua Wan, Rui Yan, Zhiyong Liu, Jintao Li, Shihua Zhang, Xuefeng Cui, Fa Zhang
2021 B conf
A Deep Reinforcement Learning-based Task Scheduling Algorithm for Energy Efficiency in Data Centers.
ICCCN
Penglei Song, Ce Chi, Kaixuan Ji, Zhiyong Liu, Fa Zhang, Shikui Zhang, Dehui Qiu, Xiaohua Wan
2021 A conf
A Multi-GPU Design for Large Size Cryo-EM 3D Reconstruction.
IPDPS
Zihao Wang, Xiaohua Wan, Zhiyong Liu, Qianshuo Fan, Fa Zhang, Guangming Tan
2021 — conf
A new meta-heuristic task scheduling algorithm for optimizing energy efficiency in data centers.
ISPA/BDCloud/SocialCom/SustainCom
Shikui Zhang, Ce Chi, Kaixuan Ji, Zhiyong Liu, Fa Zhang, Penglei Song, Huimei Yuan, Dehui Qiu, Xiaohua Wan
2021 — conf
Moment Invariants with Data Augmentation for Tongue Image Segmentation.
BIBM
Senlin Lin, Xuekun Song, Ziheng Xu, Xinyue Zhang, Yingqing Lin, Rui Zhang, Yulong Chen, Fa Zhang, Dehui Qiu, Yuling Zheng, Xiaohua Wan
2021 J jnl
Multi-labelled proteins recognition for high-throughput microscopy images using deep convolutional neural networks.
BMC Bioinform.
Enze Zhang, Boheng Zhang, Shaohan Hu, Fa Zhang, Zhiyong Liu, Xiaohua Wan
2021 C conf
Spatio-Temporal Features Processing Network for Change Detection in Remote Sensing Images.
IGARSS
Zihao Yang, Zhaobin Cao, Xiaohua Wan, Fa Zhang, Guangming Tan
2021 — conf
TransPicker: a Transformer-based Framework for Particle Picking in cryoEM Micrographs.
BIBM
Chi Zhang, Hongjia Li, Xiaohua Wan, Xuemei Chen, Zhenghe Yang, Jieqing Feng, Fa Zhang
2020 J jnl
A Consensus Framework of Distributed Multiple-Tilt Reconstruction in Electron Tomography.
J. Comput. Biol.
Zihao Wang, Jingrong Zhang, Weifang Gao, Zhiyong Liu, Xiaohua Wan, Fa Zhang
2019 — conf
A GPU Inference System Scheduling Algorithm with Asynchronous Data Transfer.
IPDPS Workshops
Qin Zhang, Li Zha, Xiaohua Wan, Boqun Cheng
2019 J jnl
AuTom-dualx: a toolkit for fully automatic fiducial marker-based alignment of dual-axis tilt series with simultaneous reconstruction.
Bioinform.
Renmin Han, Xiaohua Wan, Lun Li, Albert F. Lawrence, Peng Yang, Yu Li, Sheng Wang, Fei Sun, Zhiyong Liu, Xin Gao, Fa Zhang
2019 — conf
Cerebrovascular Segmentation Algorithm Based on Focused Multi-Gaussians Model and Weighted 3D Markov Random Field.
BIBM
Zhilong Lv, Rui Yan, Xinyu Liu, Zhongke Wu, Yicheng Zhu, Shiwei Sun, Fa Zhang, Xingce Wang, Xiaohua Wan
2019 — conf
Classifying Mixed Patterns of Proteins in High-Throughput Microscopy Images Using Deep Neural Networks.
ICIC (1)
Enze Zhang, Boheng Zhang, Shaohan Hu, Fa Zhang, Xiaohua Wan
2019 — conf
DM-SIRT: A Distributed Method for Multi-tilt Reconstruction in Electron Tomography.
ISBRA
Zihao Wang, Jingrong Zhang, Xintong Liu, Zhiyong Liu, Xiaohua Wan, Fa Zhang
2018 — conf
Fiducial marker detection via deep learning approach for electron tomography.
BIBM
Yu Hao, Renmin Han, Xiaohua Wan, Fa Zhang, Shiwei Sun
2018 J jnl
ICON-MIC: Implementing a CPU/MIC Collaboration Parallel Framework for ICON on Tianhe-2 Supercomputer.
J. Comput. Biol.
Zihao Wang, Yu Chen, Jingrong Zhang, Lun Li, Xiaohua Wan, Zhiyong Liu, Fei Sun, Fa Zhang
2018 — conf
Mmalloc: A Dynamic Memory Management on Many-core Coprocessor for the Acceleration of Storage-intensive Bioinformatics Application.
BIBM
Zihao Wang, Mingzhe Zhang, Jingrong Zhang, Rui Yan, Xiaohua Wan, Zhiyong Liu, Fa Zhang, Xuefeng Cui
2018 J jnl
SegET: Deep Neural Network with Rich Contextual Features for Cellular Structures Segmentation in Electron Tomography Image.
CoRR
Enze Zhang, Fa Zhang, Zhiyong Liu, Xiaohua Wan, Lifa Zhu
2017 — conf
A Fully Automatic Geometric Parameters Determining Method for Electron Tomography.
ISBRA
Yu Chen, Zihao Wang, Lun Li, Xiaohua Wan, Fei Sun, Fa Zhang
2017 J jnl
A Two-Phase Improved Correlation Method for Automatic Particle Selection in Cryo-EM.
IEEE ACM Trans. Comput. Biol. Bioinform.
Fa Zhang, Yu Chen, Fei Ren, Xuan Wang, Zhiyong Liu, Xiaohua Wan
2017 — conf
Accelerating Electron Tomography Reconstruction Algorithm ICON Using the Intel Xeon Phi Coprocessor on Tianhe-2 Supercomputer.
ISBRA
Zihao Wang, Yu Chen, Jingrong Zhang, Lun Li, Xiaohua Wan, Zhiyong Liu, Fei Sun, Fa Zhang
2016 — conf
aWGRS: Automates paired-end whole genome re-sequencing data analysis framework.
BIBM
Xiujuan Sun, Fa Zhang, Xiaohua Wan, Jinzhi Zhang
2014 — conf
A Parallel Scheme for Three-Dimensional Reconstruction in Large-Field Electron Tomography.
ISBRA
Jingrong Zhang, Xiaohua Wan, Fa Zhang, Fei Ren, Xuan Wang, Zhiyong Liu
2014 — conf
An Improved Correlation Method Based on Rotation Invariant Feature for Automatic Particle Selection.
ISBRA
Yu Chen, Fei Ren, Xiaohua Wan, Xuan Wang, Fa Zhang
2014 Misc conf
EPiK-a Workflow for Electron Tomography in Kepler.
ICCS
Ruijuan Chen, Xiaohua Wan, Ilkay Altintas, Jianwu Wang, Daniel Crawl, Sebastien Phan, Albert F. Lawrence, Mark H. Ellisman
2013 J jnl
Iterative Methods in Large Field Electron Microscope Tomography.
SIAM J. Sci. Comput.
Xiaohua Wan, Sebastien Phan, Albert F. Lawrence, Fa Zhang, Renmin Han, Zhiyong Liu, Mark H. Ellisman
2012 J jnl
High-performance blob-based iterative three-dimensional reconstruction in electron tomography using multi-GPUs.
BMC Bioinform.
Xiaohua Wan, Fa Zhang, Qi Chu, Zhiyong Liu
2011 — conf
High-Performance Blob-Based Iterative Reconstruction of Electron Tomography on Multi-GPUs.
ISBRA
Xiaohua Wan, Fa Zhang, Qi Chu, Zhiyong Liu
2010 — conf
An accurate, automatic method for markerless alignment of electron tomographic images.
BIBM
Qi Chu, Fa Zhang, Kai Zhang, Xiaohua Wan, Mingwei Chen, Zhiyong Liu
2009 B conf
Modified Simultaneous Algebraic Reconstruction Technique and its Parallelization in Cryo-electron Tomography.
ICPADS
Xiaohua Wan, Fa Zhang, Zhiyong Liu