Xiaodong Fang

14 papers Journal 13Unranked 1
YearRankTypeTitle / Venue / Authors
2025 J jnl
BioLLM: A standardized framework for integrating and benchmarking single-cell foundation models.
Patterns
Ping Qiu, Qianqian Chen, Hua Qin, Shuangsang Fang, Yilin Zhang, Yanlin Zhang, Tianyi Xia, Lei Cao, Yong Zhang, Xiaodong Fang, Yuxiang Li, Luni Hu
2025 J jnl
Large-scale crop dataset and deep learning-based multi-modal fusion framework for more accurate G×E genomic prediction.
Comput. Electron. Agric.
Qixiang Zou, Shuaishuai Tai, Qianguang Yuan, Yating Nie, Heping Gou, Longfei Wang, Chuanxiu Li, Yi Jing, Fangchun Dong, Zhen Yue, Yi Rong, Xiaodong Fang, Shengwu Xiong
2024 J jnl
A multi-modal deep language model for contaminant removal from metagenome-assembled genomes.
Nat. Mac. Intell.
Bohao Zou, Jingjing Wang, Yi Ding, Zhenmiao Zhang, Yufen Huang, Xiaodong Fang, Ka Chun Cheung, Simon See, Lu Zhang
2024 J jnl
VCF2PCACluster: a simple, fast and memory-efficient tool for principal component analysis of tens of millions of SNPs.
BMC Bioinform.
Weiming He, Lian Xu, Jingxian Wang, Zhen Yue, Yi Jing, Shuaishuai Tai, Jian Yang, Xiaodong Fang
2023 J jnl
Benchmarking genome assembly methods on metagenomic sequencing data.
Briefings Bioinform.
Zhenmiao Zhang, Chao Yang, Werner Pieter Veldsman, Xiaodong Fang, Lu Zhang
2023 J jnl
Benchmarking multi-platform sequencing technologies for human genome assembly.
Briefings Bioinform.
Jingjing Wang, Werner Pieter Veldsman, Xiaodong Fang, Yufen Huang, Xuefeng Xie, Aiping Lyu, Lu Zhang
2023 J jnl
NGenomeSyn: an easy-to-use and flexible tool for publication-ready visualization of syntenic relationships across multiple genomes.
Bioinform.
Weiming He, Jian Yang, Yi Jing, Lian Xu, Kang Yu, Xiaodong Fang
2023 J jnl
Sparse Inversion of Aerosol Concentration Distribution Based on LIDAR Remote Sensing.
IEEE Access
Weiyi Wang, Dongsheng Yu, Haibo Yu, Minghan Yang, Chidong Xu, Xiaodong Fang
2022 J jnl
Using vendor management inventory system for goods inventory management in IoT manufacturing.
Enterp. Inf. Syst.
Xiaodong Fang, H.-C. Chen
2021 J jnl
Using Bayesian network technology to predict the semiconductor manufacturing yield rate in IoT.
J. Supercomput.
Xiaodong Fang, Chan Chang, Genggeng Liu
2019 J jnl
Mr.Vc: a database of microarray and RNA-seq of Vibrio cholerae.
Database J. Biol. Databases Curation
Zhiyuan Zhang, Guozhong Chen, Jun Hu, Wajid Hussain, Fenxia Fan, Yalin Yang, Zhigang Zhou, Xiaodong Fang, Jun Zhu, Wei-Hua Chen, Zhi Liu
2016 — conf
Eliminating heterozygosity from reads through coverage normalization.
BIBM
Zicheng Zhao, Yen Kaow Ng, Xiaodong Fang, Shuaicheng Li
2015 J jnl
BS-SNPer: SNP calling in bisulfite-seq data.
Bioinform.
Shengjie Gao, Dan Zou, Likai Mao, Huayu Liu, Pengfei Song, Youguo Chen, Shancen Zhao, Changduo Gao, Xiangchun Li, Zhibo Gao, Xiaodong Fang, Huanming Yang, Torben F. Ørntoft, Karina D. Sørensen, Lars Bolund
2007 J jnl
FGF: A web tool for Fishing Gene Family in a whole genome database.
Nucleic Acids Res.
Hongkun Zheng, Junjie Shi, Xiaodong Fang, Yuan Li, Søren Vang, Wei Fan, Junyi Wang, Zhang Zhang, Wen Wang, Karsten Kristiansen, Jun Wang